Ptychodera flava: 139145249
Help
Entry
139145249 CDS
T10724
Name
(RefSeq) replication protein A 70 kDa DNA-binding subunit-like
KO
K07466
replication factor A1
Organism
pfll Ptychodera flava
Pathway
pfll03030
DNA replication
pfll03420
Nucleotide excision repair
pfll03430
Mismatch repair
pfll03440
Homologous recombination
pfll03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139145249
03420 Nucleotide excision repair
139145249
03430 Mismatch repair
139145249
03440 Homologous recombination
139145249
03460 Fanconi anemia pathway
139145249
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pfll03000
]
139145249
03032 DNA replication proteins [BR:
pfll03032
]
139145249
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139145249
Transcription factors [BR:
pfll03000
]
Eukaryotic type
Zinc finger
Cys2His2 others
139145249
DNA replication proteins [BR:
pfll03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
139145249
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
139145249
MMR (mismatch excision repair)
139145249
DSBR (double strand breaks repair)
HR (homologous recombination)
139145249
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac-A_C
REPA_OB_2
Rep-A_N
tRNA_anti-codon
DUF223
IBR
Motif
Other DBs
NCBI-GeneID:
139145249
NCBI-ProteinID:
XP_070572382
LinkDB
All DBs
Position
12:17932993..17949023
Genome browser
AA seq
597 aa
AA seq
DB search
MSFRLSKGNLEMIANGSQPQKPVFQILGCKKINSTVQSNTDRYRLLLSDGVKSHSAMLAT
QLNSKVASGDLDPRTIIQLDKYICNTIADNKRVMIILEISVVAKGSEVTTRIGNPEPLTV
GGARKPAGQQQQSPQNKPMGGPRKDGDMTNQMPKLPTTPGGGMSKVFPIASLTPYQNRWT
IRARVTNKGKVRNWSNSRGEGCLFSMDLIDDSAEIRATAFNDQCRKFFDMITVGKVYYFS
RGTLKTANKQYTSIKNDYEMTFTGETQVQLCDDVNTDDIPDVQFDFKPISKLEEIEKDTM
VDIIGVCKSTGELTTITTRATNKEVSKKDVHLVDDSEKVVTMTLWGEEAEKFDGSSCPVI
AIKGAKLSDYGGRSLSMLQSSVLQINPDIPRAHHLKGWYDGVGQSKEIQSISEQRSGGAS
TNWKNLSEVRSNNLGMGEKPDYFTAKATVVFIRKENCMYKACPSSECNKKVIENTDGTYR
CEKCNKEYPDFKYRLLLSANVVDFGDGQWATCFQDQAETLLGQNADYVGNLRDTNEVEYD
ELFQEANFKSYNFRMRIKQETYNDETRLKTSVVDVKRLDFKEYTKKLIMDIRSLASS
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgagttttcgtctcagcaagggcaaccttgagatgattgccaatggcagccaacctcaa
aaacccgtatttcaaatcttgggctgtaagaagataaacagcacagtgcagtccaacact
gacaggtatcgcttgcttctctccgacggagtcaaaagccattcagctatgttggcaacg
cagctgaattcaaaagtagctagcggtgaccttgaccctagaactatcattcagttggac
aagtacatctgcaataccattgccgacaacaagcgtgtgatgataatcttagaaatatca
gtggttgccaagggaagtgaggtgaccaccagaataggtaatccagaaccattaactgtt
ggtggcgctaggaagccagcagggcaacaacaacagtcaccacagaacaaacccatggga
ggaccacgcaaggatggagacatgaccaaccaaatgccaaaactgccaacaactccaggg
ggtggaatgtctaaagtgtttcctatagctagcctaacaccttatcagaacaggtggacc
atcagagctcgtgtgaccaacaagggcaaggtcaggaactggagtaactctcgcggtgaa
ggctgtctgttctccatggatctgattgacgactccgccgaaatcagagcaacggctttt
aatgatcaatgccggaagttctttgacatgataaccgttggcaaggtgtactacttttca
agaggcacactgaagactgccaacaagcagtacacctcgatcaagaatgactatgaaatg
acgttcaccggtgagacccaggtgcagctgtgtgatgacgtcaacactgacgatatacca
gatgtacagtttgactttaaaccaatcagtaaactggaagaaattgagaaagacaccatg
gttgacattattggtgtgtgcaagagtactggtgagctaaccaccattaccacaagagct
actaataaggaagtcagcaagaaagatgtccacctcgtggatgactcggagaaagtggtt
accatgacactctggggtgaggaagctgagaagtttgatggttctagctgtccagtgatt
gccatcaagggagccaagctgtctgactacggagggagatctctgtccatgctccagtcc
agtgttctgcaaatcaaccctgacatacccagggctcaccaccttaaaggatggtacgat
ggtgttggacaatccaaagagattcagtccatctcagaacagagaagtggcggagccagc
actaactggaagaacctgtcggaagtgagatcaaacaaccttggaatgggagagaagcca
gactacttcacggccaaagctacagttgtctttatcagaaaagaaaactgtatgtacaag
gcttgtccctcgtctgagtgcaacaagaaggtcattgagaacacggatggaacttatcgc
tgtgagaaatgtaacaaggaatacccagattttaaatacagactgctgctctcagctaat
gtagttgactttggtgatggtcagtgggccacctgtttccaagaccaagcagagacattg
cttggacagaatgctgactatgtcggtaacctcagagatacaaatgaagtagagtatgat
gagctgtttcaggaggccaacttcaagtcgtacaatttcagaatgaggatcaagcaagaa
acatacaatgatgaaacccgtctgaaaacttcagtggtggacgtcaaacgtctcgacttc
aaggaatacactaaaaaactaatcatggatatcaggagcctggcgtccagttaa
DBGET
integrated database retrieval system
