Ptychodera flava: 139145302
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Entry
139145302 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: pre-mRNA-processing-splicing factor 8-like
KO
K12856
pre-mRNA-processing factor 8
Organism
pfll Ptychodera flava
Pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139145302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfll03041
]
139145302
Spliceosome [BR:
pfll03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
139145302
Complex C
U5 SnRNP specific factors
139145302
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PROCN
PRP8_domainIV
U6-snRNA_bdg
PRO8NT
U5_2-snRNA_bdg
PROCT
RRM_4
JAB
Motif
Other DBs
NCBI-GeneID:
139145302
NCBI-ProteinID:
XP_070572452
LinkDB
All DBs
Position
12:complement(19322620..19354191)
Genome browser
AA seq
2336 aa
AA seq
DB search
MAAAFMMQPGQGFGMMPGVMHQQPEPLSEEKLQDKARKWQQLQSKRYAEKRKFGFVDAQK
EDMPPEHVRKIIRDHGDMTNRKFRHDKRVYLGALKYMPHAVMKLMENMPMPWEQIRDVKC
IYHITGAITFVNEIPWVIEPVYIAQWGSMWIMMRREKRDRRHFKRMRFPPFDDEEPPLDY
ADNVLDVEPLEPIQMELDPEEDASVFEWFYDHRPLSDTKYVNGSSYRRWGLSLPIMSTLY
RLANQLLTDLVDDNYFYLFDMKSFFTSKALNMAIPGGPKFEPLVRNATLQDEDWNEFNDV
NKIIIRQQIRTEYKIALPYLYNNLPYYVQLTWYHTPNVVFIKTEDPDLPAFYFDPLINPI
SHRHTVKHTEPLPDDDEEFELPEYVEPFLQEHPLYTDNTANGIALLWAPRPFDLRSGIQR
RAVDVPLVKSWYREHCPAGQPVKVRVSYQKLLKYYVLNALKHRPPKSQKKRYLFRSFKAT
KFFQSTTLDWVEAGLQVCRQGYNMLNLLIHRKNLNYLHLDYNFNLKPVKTLTTKERKKSR
FGNAFHLCREILRLTKLVCDSHVQYRLGNVDAFQLADGLQYMFSHVGQLTGMYRYKYKLM
RQIRMCKDLKHLIYYRFNTGPVGKGPGCGFWAPGWRVWIFFMRGITPLLERWLGNLLSRQ
FEGRHSKGVAKTVTKQRVESHYDLELRASVMHDILDMMPEGIKQNKARTILQHLSEAWRC
WKANIPWKVPGLPTPIENMILRYVKAKADWWTNTAHYNRERIRRGATVDKTVCKKNLGRL
TRLYLKAEQERQHNYLKDGPYISAEEAVAIYTTTVHWLESRRFSPIPFPPLSYKHDTKLL
ILALERLKEAYSVKSRLNQSQREELGLIEQAYDNPHEALSRIKRHLLTQRAFKEVGIEFM
DLYSHLIPVYDVEPLEKITDAYLDQYLWYEADKRRLFPPWIKPSDSEPPPLLTYKWCQGI
NNLQDVWDTAEGECNVMMESKFEKMYEKIDLTLLNRLLRLIVDHNIADYMTAKNNIVINY
KDMNHTNSYGIIRGLQFASFIAQYYGLVLDLLCLGLHRASEMCGPPQMPNDFLTYLDVTT
EGAHPIRLYSRYIDRVHIFFRFTAEEARDLIQRYLTEHPDPNNENIVGYNNKKCWPRDAR
MRLMKHDVNLGRAVFWDMKNRLPRSVTTFNWENSFVSVYSKDNPNLLFNMSGFECRILPK
CRTTHEEFTHRDGVWNLQNEVTKERTAQCFLRVDDESMQRFHNRVRQILMASGSTTFTKI
VNKWNTALIGLMTYFREAVVNTQELLDLLVKCENKIQTRIKIGLNSKMPSRFPPVVFYTP
KELGGLGMLSMGHVLIPQSDLRWSKQTDVGITHFRAGMSHDEDQLIPNLYRYIQPWESEF
IDSQRVWAEYALKRQEALAQNRRLTLEDLEDSWDRGIPRINTLFQKDRHTLAYDKGWRVR
TDFKQYQVLKQNPFWWTHQRHDGKLWNLNNYRTDMIQALGGVEGILEHTLFKGTYFPTWE
GLFWEKASGFEESMKYKKLTNAQRSGLNQIPNRRFTLWWSPTINRANVYVGFQVQLDLTG
IFMHGKIPTLKISLIQIFRAHLWQKVHESVVMDLCQVFDQELDALEIDTVQKETIHPRKS
YKMNSSCADILLFANHRWLVSRPSLLADSKDTMDNTTTQKYWIDVQLRWGDYDSHDIERY
ARAKFLDYTTDNMSIYPSPTGVLIAIDLAYNLHSAFGNWFPGAKPLIQQAMAKIMKANPA
LYVLRERIRKGLQLYSSEPTEPYLSSQNYGELFSNQIIWFVDDTNVYRVTIHKTFEGNLT
TKPINGAIFIFNPRTGQLFLKIIHTSVWAGQKRLGQLAKWKTAEEVAALIRSLPVEEQPK
QIIVTRKGMLDPLEVHLLDFPNIVIKGSELQLPFQACLKVEKLGDLILKATEPQMVLFNL
YDDWLKSISSYTAFSRLILILRALHVNTDRTKVLMKPDKTTITEPHHIWPSLTDEEWIEV
ELALKDLILADYGKRNNVNVASLTQSEIRDIILGMEISAPSQQRQQIAEIEKQTKEQSQL
TATTTRTVNKHGDEIITSTTSNYETATFSSKTEWRVRAISATNLHLRTNHIYVSSDDIKE
TGYTYILPKNILKKFIIISDLRAQIAGYLYGVSPPDNPQVKEIRCIVMVPQWGTHQTVHL
PNQLPQHEYLKEMEPLGWVHTQPNETPQLSPQDITTHAKIMADNPSWDGEKTVVITCSFT
PGSCSLTAYKLTPSGYEWGRQNTDKGNNPKGYLPSHYERVQMLLSDRFLGFFMVPAQGSW
NYNFMGVRHDPNMRYDLLLANPKEFYHEVHRPSHFLNFSSIEEGDAFGTDREDLYL
NT seq
7011 nt
NT seq
+upstream
nt +downstream
nt
atggctgcagcattcatgatgcagccaggccaggggtttggtatgatgcctggtgttatg
catcaacagccagaacccctcagtgaagaaaaactccaagataaagcacgtaaatggcag
cagttgcaatcaaaacgatatgcagagaaaagaaaatttggttttgttgatgcacaaaaa
gaggacatgcctccagaacatgtgaggaagatcatcagagaccatggtgatatgacaaac
aggaaattcagacatgataaaagagtgtaccttggagctttgaagtacatgccccatgca
gtcatgaagctgatggaaaacatgccaatgccatgggaacagatcagagatgtcaagtgc
atttaccacatcactggtgcaatcacatttgtcaatgagattccatgggttatagagcca
gtctacattgcacagtgggggagtatgtggatcatgatgcgtcgcgagaagagagatcgt
cgccacttcaaacggatgcgatttccaccctttgacgatgaggaacccccgctagattat
gcagacaacgtacttgatgttgaacccttggaaccaatccagatggaactggatccagaa
gaagatgcttcagttttcgagtggttttacgatcacagacctctgtcagatacaaagtat
gtgaacggatcaagctacagaaggtggggattgagtttacccatcatgtcaacattatac
cgtctggccaatcaactgctaacagacttggtagatgacaactatttctatttgttcgac
atgaagtccttcttcacatccaaagcactcaacatggcaattcctggaggaccaaaattt
gaacctttggtcagaaatgccactctgcaagatgaagactggaatgagttcaatgatgtc
aataagatcatcatccgacagcagatccgtacggaatacaaaattgccttgccctatctg
tacaacaacctaccatactatgtacagctgacatggtaccacactccaaatgttgtgttc
atcaaaacagaagatcctgacttgccagcattttactttgatcctctcatcaatcctatc
tcacacagacacaccgtgaagcacacagagccgctaccagatgacgatgaggagtttgaa
ttaccagaatatgtagagccatttctccaggaacatcctctttacacagacaacacagcc
aatggcattgctttgctctgggcaccaagaccatttgatttgaggtctggtatccagcgt
agggctgtggatgtaccattggtcaaatcatggtatcgtgagcattgcccagcaggtcaa
cctgtgaaggtcagagtgtcatatcagaagttgttgaaatactatgtactgaatgcactg
aaacacagaccaccaaaatcacagaaaaagaggtatctgttccggtcattcaaagcaacc
aagtttttccagtccacaacacttgactgggtagaggcaggtcttcaagtgtgcaggcag
ggatacaacatgttgaatctgctgattcacagaaagaatctcaactatcttcacttggat
tacaacttcaatttgaaacctgtcaagactttgacaacaaaggaacgtaagaagtcaagg
tttggcaatgcctttcacttgtgtcgtgagattctacgtcttaccaagctagtatgtgac
agccatgtacagtacagactgggtaatgttgatgctttccagcttgcagatgggcttcag
tacatgttttctcatgtgggtcagctgactggtatgtacagatacaagtacaagctgatg
agacagatccgtatgtgtaaagatctcaaacatctcatatactacagattcaacacaggt
ccagtgggcaagggaccaggatgcggtttctgggctccaggctggcgtgtctggatcttt
ttcatgcgtggtatcacaccacttctggagagatggctcggcaatttgctgtcacgtcag
tttgaaggacgtcactccaagggtgtggccaagacggtcactaaacagcgtgtggagagt
cactatgatttggaactgagagcttctgtgatgcatgatatcttggatatgatgccggaa
ggaatcaaacaaaacaaagccaggaccattctccagcatttgagtgaagcatggagatgc
tggaaggcgaacattccatggaaggttccaggtttgccaacaccaatagaaaacatgatt
cttaggtatgtgaaagccaaggctgattggtggaccaacactgcacattacaacagagag
cgtattcgtagaggtgctactgttgacaagacagtgtgtaagaagaaccttggaagattg
acaaggttgtacctgaaggcagaacaagaaagacaacacaactacttgaaggatggtcca
tacatttcagcagaagaagctgtcgctatctacaccaccacagtgcattggctggaaagt
agacgattctctccaattccattcccaccactgtcatacaaacatgacactaaactcctg
atccttgccttggaaagactgaaagaggcatacagtgtcaagagcagactgaatcagtcc
cagcgtgaggaactgggtctcattgaacaggcatacgacaatcctcacgaagctctcagt
agaatcaaacgtcacttgctgacgcagagagctttcaaagaggttggtattgagttcatg
gatctgtacagtcatctgatcccagtgtatgatgtggaacctttggagaagatcacagat
gcttacctggatcagtatctgtggtatgaagctgacaagagacggcttttcccaccatgg
atcaaaccatcagacagtgaaccacctccactgctcacatacaagtggtgtcaaggtatt
aacaatctacaagatgtgtgggacacagcagaaggagagtgtaatgtcatgatggagtcc
aaatttgaaaagatgtatgagaagatagacttgaccttgcttaacagattgctacgtctg
attgttgatcacaacattgctgattacatgacagccaagaataacatcgtcatcaactac
aaggatatgaaccacaccaattcctatggtatcatccgaggtctacagtttgcctctttc
attgcccagtactatggtttggtgctggatctactgtgcctaggtctccacagagccagt
gaaatgtgtggcccacctcaaatgccaaacgatttcctcacctatctggatgttaccaca
gagggagctcatccaatcagactgtattcaagatacattgatagagtacacatctttttc
aggttcacagcagaggaggccagggacctgattcagaggtatcttacagaacatccagat
ccgaacaatgaaaacatcgttgggtacaacaacaagaaatgctggcctagagatgctaga
atgagactcatgaaacatgatgtcaatttgggtcgtgctgtgttctgggacatgaagaat
cgtctgcccaggtcagtgacaacattcaactgggagaatagctttgtgtcagtgtacagc
aaggacaacccaaatctgctgttcaacatgagtgggtttgagtgcagaatacttccaaag
tgtaggacgacacatgaagagttcactcacagagatggtgtctggaatttacaaaatgag
gtgaccaaagagcgtacagctcagtgtttcttgagagtggatgatgaatccatgcagagg
ttccacaacagagtccggcagattctcatggcatcaggatctaccacattcaccaagatt
gtcaacaaatggaacactgccttgattgggttgatgacctacttccgtgaggcagttgtc
aacactcaagaattgctggacttgctggtcaagtgtgaaaacaagatccagacacgtatc
aagattggtttgaactccaagatgcccagtcgtttcccaccggtcgtcttctacacacca
aaggagctgggtggtctgggtatgttatccatgggacatgtgctaattccacagtcagat
ttgaggtggtccaagcagacagatgtcggtataacacatttccgtgctggtatgagccat
gacgaggatcagttgattcccaacttgtaccggtacatccaaccctgggagagtgagttc
atcgactcacaacgtgtgtgggcagagtatgccttgaagagacaagaagctctggcacag
aacagacgtcttacccttgaagacttggaagattcctgggacagaggtattccacgtatc
aacacactgttccagaaagacagacacaccctggcctatgacaaaggctggagagtcaga
acagacttcaaacagtaccaggtacttaaacagaatccattctggtggactcaccaaaga
cacgacggtaaactatggaatctgaacaactacagaacagacatgatccaggccctagga
ggtgtagagggaatcttggaacacactctgttcaagggtacatacttcccaacatgggaa
ggtcttttctgggaaaaggctagtggatttgaagagtctatgaagtacaagaaactgacc
aatgcccagagatcaggtctgaatcagattccaaacagaagatttacactttggtggtca
ccaactatcaacagagccaatgtgtatgtaggtttccaggtgcagttggacttgactggc
atcttcatgcacggcaagattccgacactgaagatctccttgatccagatattcagggct
cacttgtggcagaaagtccatgaaagtgttgtcatggatctctgtcaggtgtttgatcaa
gagttggatgcgttggaaattgacacagtacagaaagaaaccattcatcccaggaaatct
tacaagatgaacagttcctgtgctgacatattactctttgccaatcataggtggcttgtg
tctagaccctcattgctggcagattccaaggacactatggacaacactaccacacagaaa
tactggatagacgtacaactgagatggggtgactatgattctcatgatatcgaaagatat
gccagagcaaagttccttgactacaccacagacaacatgagtatctatccatcaccgact
ggtgttttgattgcaatagacttggcatacaacctccatagtgcatttggtaactggttc
cctggagccaaaccactgatccagcaagccatggccaagatcatgaaagccaaccctgcc
ttgtatgtgttacgtgaaagaatccgtaagggtctacagctgtactcctcagagcccact
gagccgtacctgtcatcacagaactatggtgaactcttctccaatcagatcatctggttt
gtggatgacaccaacgtgtacagagtcaccattcacaagacatttgaaggtaacctgaca
accaaaccaatcaacggcgccatcttcatcttcaacccacgtactgggcagcttttcctg
aagattatccatacgtctgtatgggcaggacagaaacgtctgggacagcttgccaaatgg
aagacagctgaagaagttgctgctttgatccgatcactgccagtggaagaacaacccaag
caaatcattgtcaccaggaagggtatgctggatcctcttgaggtccacttgttggatttc
cccaacattgtgatcaagggcagtgaattgcagctgcctttccaggcctgtctgaaagtt
gagaagcttggagacttgattctgaaagctacagaaccacagatggtcttgttcaacctc
tacgatgactggctgaagagcatctcctcatacactgccttctccaggttaatcctgatt
ctgagagccctccatgtgaacacagaccgtaccaaggtgttgatgaaaccggacaagact
actatcacagagccccatcatatctggccgtctctgacagatgaagaatggattgaggtt
gaattggccctcaaagatctcatccttgctgactatggaaagaggaacaacgtgaatgtg
gcatccttgacccagtctgagatccgtgacatcattctgggtatggaaatctctgcacca
tctcaacaacgtcaacagattgctgaaattgaaaaacagaccaaggaacagtctcagctg
actgccaccaccacaagaactgtcaacaaacatggtgatgagatcataacatccacaacc
agtaactacgagacagccacattctcctccaagactgagtggagagtacgagccatatca
gccacaaatctgcatcttagaaccaaccacatctatgtgtcctccgatgacatcaaagaa
accggctacacatacatcctgccaaagaacatcctcaagaaattcattattatctcagat
cttagagctcagattgctgggtacctatatggagtgagtccccctgacaaccctcaagtg
aaggagatccgatgcattgtgatggtgccacagtggggaacacaccagactgtacatcta
ccaaatcaactaccacagcatgagtatctcaaggaaatggagccgcttggttgggttcac
actcagcccaatgagacacctcagttgtcaccgcaagacatcacaacacatgccaagatt
atggctgataatccatcgtgggatggtgagaaaactgttgtcatcacttgcagcttcacc
ccgggttcgtgctctctgacggcatacaaactgacaccgagtggatatgaatggggaaga
cagaacacagacaagggaaacaaccccaagggttacctaccatctcactatgaacgtgta
cagatgttactgtccgacagattcctgggtttcttcatggtgccagcacaaggatcatgg
aattacaacttcatgggtgttcgtcacgatcccaacatgaggtatgatttgctgttggcc
aatcccaaggagttctatcatgaagtacatcgtccgtcacacttcctgaatttcagttca
attgaagaaggagatgcctttggaactgacagggaagacttgtatctttga
DBGET
integrated database retrieval system
