Ptychodera flava: 139145901
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Entry
139145901 CDS
T10724
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pfll Ptychodera flava
Pathway
pfll03030
DNA replication
pfll03410
Base excision repair
pfll03420
Nucleotide excision repair
pfll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139145901
03410 Base excision repair
139145901
03420 Nucleotide excision repair
139145901
03430 Mismatch repair
139145901
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfll03032
]
139145901
03036 Chromosome and associated proteins [BR:
pfll03036
]
139145901
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139145901
DNA replication proteins [BR:
pfll03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139145901
DNA Replication Termination Factors
ELG1-RFC complex
139145901
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139145901
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139145901
Check point factors
HRAD17(Rad24)-RFC complex
139145901
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
nSTAND_NTPase5
AAA_lid_RFC1
RCF1-5-like_lid
AAA_14
Viral_helicase1
AAA_16
AAA_11
Rad17
Mg_chelatase
AAA_19
AAA_assoc_2
nSTAND3
AAA_24
RuvB_N
AAA_18
AAA_5
MipZ
AAA_28
AAA_25
ABC_tran
DNAX_ATPase_lid
bpMoxR
AAA_2
SLFN-g3_helicase
AAA_30
MeaB
NTPase_1
RNA_helicase
AAA_23
FtsK_SpoIIIE
Motif
Other DBs
NCBI-GeneID:
139145901
NCBI-ProteinID:
XP_070573447
LinkDB
All DBs
Position
12:complement(40805585..40814772)
Genome browser
AA seq
354 aa
AA seq
DB search
MEEKTGEAMEVGDGASTSNKESKPTATRPGKSSSGYELPWVEKYRPVTLDEVVGNEETVS
RLGVFAKDGNVPNIIIAGPPGTGKTTSILCLARTLLGSAFKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNTSDKII
EPIQSRCAVLRYSKLTDAQVLNRLLTVIEKEKVTSDDSGLEAIIFTSQGDMRQALNNLQS
TWQGFGDVTGENVFKVCDEPHPLIVKNMLQHCVDANIDEAYKLMKHLWMMGYSSEDIINN
MFRVCKNAQIPEYIKLEFIKEIGYTHLRIAEGVQSLLQMSGLLARLCQKTESPE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaaacaggggaagcgatggaagtaggtgacggcgccagtaccagtaataaa
gaatcaaagccaacagcgacgagacctgggaaatcatcgtcaggttatgaacttccatgg
gttgagaagtataggccagtgacattggatgaagttgtcggcaatgaagaaactgtcagt
agactgggagtatttgccaaagacggcaatgttccaaatatcattattgctggtccacca
ggtactggcaagacaacaagtatactgtgtttggcaaggacattacttggatcagctttc
aaagatgctgtccttgaactcaatgcgtcaaatgacagaggtattgatgttgtcaggaac
aagattaaaatgtttgcacagcagaaagtaacactgcctaaaggaagacataaaattata
atcctggatgaagctgacagtatgacagatggagcgcagcaggcactgaggagaaccatg
gagatttactccaaaaccactcgctttgcattagcttgcaacacatcagataaaatcatt
gaaccaattcagtcccgatgtgctgttttgaggtactccaagctaacagatgctcaggtt
ttaaatcgtctgttgacagtcattgaaaaggaaaaagtgacgtcagatgacagtggactg
gaagctattatttttacatcacagggagatatgagacaggcactgaataacttgcagtca
acgtggcagggatttggtgatgtcaccggagaaaatgtcttcaaggtatgtgatgaacca
cacccactgattgtgaagaatatgttgcaacattgtgtggacgccaacattgatgaagct
tataaactgatgaagcatctatggatgatgggatattcttcagaggatatcataaacaat
atgtttagagtctgtaagaatgcccagatacctgaatacataaagctagaattcatcaag
gagattggttacacccacttacggatagctgaaggtgtgcagtctctgttacagatgtca
ggattattggcaaggttgtgtcaaaagactgaatcaccagaatga
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