Ptychodera flava: 139145937
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Entry
139145937 CDS
T10724
Name
(RefSeq) replication factor C subunit 2-like
KO
K10755
replication factor C subunit 2/4
Organism
pfll Ptychodera flava
Pathway
pfll03030
DNA replication
pfll03410
Base excision repair
pfll03420
Nucleotide excision repair
pfll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
139145937
03410 Base excision repair
139145937
03420 Nucleotide excision repair
139145937
03430 Mismatch repair
139145937
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pfll03032
]
139145937
03036 Chromosome and associated proteins [BR:
pfll03036
]
139145937
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139145937
DNA replication proteins [BR:
pfll03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
139145937
DNA Replication Termination Factors
ELG1-RFC complex
139145937
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
139145937
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
139145937
Check point factors
HRAD17(Rad24)-RFC complex
139145937
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_22
RCF1-5-like_lid
AAA_14
Viral_helicase1
AAA_16
AAA_24
AAA_11
Rad17
Mg_chelatase
AAA_19
AAA_assoc_2
nSTAND3
RuvB_N
AAA_18
AAA_5
MipZ
AAA_28
AAA_25
DNAX_ATPase_lid
ABC_tran
bpMoxR
AAA_30
AAA_2
MeaB
NTPase_1
SLFN-g3_helicase
RNA_helicase
AAA_23
FtsK_SpoIIIE
AAA_3
Motif
Other DBs
NCBI-GeneID:
139145937
NCBI-ProteinID:
XP_070573490
LinkDB
All DBs
Position
12:complement(42356061..42365259)
Genome browser
AA seq
354 aa
AA seq
DB search
MEEKTGEAMEVGDGASTSNKESKPTATRPGKSSSGYELPWVEKYRPVTLDEVVGNEETVS
RLGVFAKDGNVPNIIIAGPPGTGKTTSILCLARTLLGSAFKDAVLELNASNDRGIDVVRN
KIKMFAQQKVTLPKGRHKIIILDEADSMTDGAQQALRRTMEIYSKTTRFALACNTSDKII
EPIQSRCAVLRYSKLTDAQVLNRLLTVIEKEKVTSDDSGLEAIIFTSQGDMRQALNNLQS
TWQGFGDVTGENVFKVCDEPHPLIVKNMLQHCVDANIDEAYKLMKHLWMMGYSSEDIINN
MFRVCKNAQIPEYIKLEFIKEIGYTHLRIAEGVQSLLQMSGLLARLCQKTESPE
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaggaaaaaacaggggaagcgatggaagtaggtgacggcgccagtaccagtaataaa
gaatcaaagccaacagcgacgagacctgggaaatcatcgtcaggttatgaacttccatgg
gttgagaagtataggccagtgacattggatgaagttgtcggcaatgaagaaactgtcagt
agactgggagtatttgccaaagacggcaatgttccaaatatcattattgctggtccacca
ggtactggcaagacaacaagtatactgtgtttggcaaggacattacttggatcagctttc
aaagatgctgtccttgaactcaatgcatcaaatgacagaggtattgatgttgtcaggaac
aagattaaaatgtttgcacagcagaaagtaacactgcctaaaggaagacataaaattata
atcctggatgaagctgacagtatgacagatggagcgcagcaggcactgaggagaaccatg
gagatttactccaaaaccactcgctttgcattagcttgcaacacatcagataaaatcatt
gaaccaattcagtcccgatgtgctgttttgaggtactccaagctaacagatgctcaggtt
ttaaatcgtctgttgacagtcattgaaaaggaaaaagtgacgtcagatgacagtggactg
gaagctattatttttacatcacagggagatatgagacaggcactgaataacttgcagtca
acgtggcagggatttggtgatgtcaccggagaaaatgtcttcaaggtatgtgatgaacca
cacccactgattgtgaagaatatgttgcaacattgtgtggacgccaacattgatgaagct
tataaactgatgaagcatctatggatgatgggatattcttcagaggatatcataaacaat
atgtttagagtctgtaagaatgcccagatacctgaatacataaagctagaattcatcaag
gagattggttacacccacttacggatagctgaaggtgtgcagtctctgttacagatgtca
ggattattggcaaggttgtgtcaaaagactgaatcaccagaatga
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