Ptychodera flava: 139145939
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Entry
139145939 CDS
T10724
Name
(RefSeq) RING-type E3 ubiquitin-protein ligase PPIL2-like isoform X1
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
pfll Ptychodera flava
Pathway
pfll04120
Ubiquitin mediated proteolysis
Brite
Enzymes [BR:
pfll01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
139145939
Spliceosome [BR:
pfll03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
139145939
Complex C
U4/U6.U5 tri-SnRNP related factors
139145939
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
139145939
Chaperones and folding catalysts [BR:
pfll03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
139145939
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
U-box type E3
139145939
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
Rtf2
zf-NOSIP
U-box
SUB1_ProdP9
Motif
Other DBs
NCBI-GeneID:
139145939
NCBI-ProteinID:
XP_070573494
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All DBs
Position
12:42393427..42427049
Genome browser
AA seq
519 aa
AA seq
DB search
MGKRQHQKDKMYITYTEWTTQYGGKQAGSDIGEKAAFRRLPFDHCSLSLQPFEHPYCTPD
GTVYDLTNIIPYLKKYGSNPITGEPMEAKGLIKLHFHKNADGKFHCPVTYKVFTKNSHIV
AIKPTGNVYTNEAVETLNIKPKHMMDLLTDEPFSRKDIITLQDPHNLDKFNIAEFHHVKN
SLKADDEEEKKAREDPSYHLKTTSAETRDILEELYRDYKPKEEKAGDAKKADKTNAAHYS
TGAVAASFTSTAAVPVTEHEAAVIDEDIVRYALVKSKGYVRIITNKGNLNVELHCDMVPK
TCENFILLSSKGYYNNTQFHRSIRNFMIQGGDPTGTGKGGESAWGGQFKDEFKPNLTHSG
RGVLSMANSGTNTNKSQFFITYRSCRHLDNKHSVFGRVVGGLEVLNAMEAVQTDKKDRPK
DDITIETIKVFVNPFEEADEKLRIQREKDAKEKKEAEMKATSVVLKTEEAPKTYRSGVGK
YISPTPSTSKRLTEEESTSSYTSKKKAKSSGGFGNFSSW
NT seq
1560 nt
NT seq
+upstream
nt +downstream
nt
atggggaaacgtcaacaccaaaaggataaaatgtacatcacgtacactgaatggactaca
caatatggaggaaagcaagcaggatctgatattggtgagaaagcagcattcagaagatta
ccatttgatcattgcagtctttcacttcaaccatttgaacacccctactgtacaccagat
ggtactgtctatgatctgacaaacatcataccatacctgaagaaatatggaagtaatcct
atcactggagagccgatggaagccaagggattgataaagcttcatttccataaaaatgca
gacggaaagttccactgtccggttacctacaaagtcttcacaaagaattcacatattgtt
gccatcaaaccaactggcaatgtgtatacaaatgaggcagtggaaaccctgaacattaaa
ccaaaacacatgatggatctgttgactgatgaaccattcagcagaaaagatatcatcaca
ttacaagatccacacaacttggacaaatttaatattgctgaatttcatcatgtaaaaaac
agtctgaaagcagatgatgaagaagagaaaaaagcaagagaggacccatcatatcatttg
aagacaacttcagcagaaaccagagatatcttagaagagctttatagagattacaaaccc
aaggaagaaaaggcaggagatgcaaagaaagctgacaaaacaaatgccgctcactatagt
acgggtgcagtagctgccagttttacatcaactgctgcagtgccagtcacagaacatgaa
gctgctgtcattgatgaagatattgtcagatatgcacttgtcaaatctaaaggttatgtc
aggattatcaccaataaaggaaatttgaatgttgaactgcactgtgacatggtacccaag
acatgtgaaaacttcattttactaagttccaaaggatattacaataatacacagttccac
agatcaataagaaacttcatgattcaaggaggagatcccacaggtacaggcaaaggtgga
gagtcagcgtggggtggtcaattcaaagatgaattcaaacctaatttgacccattctggc
cgaggtgttcttagtatggcaaactcaggaaccaacactaacaagtcacagttttttatc
acatacagatcatgcagacatttggataacaaacattcagtctttggcagagttgttgga
ggtttagaggtactgaatgcaatggaagctgtgcagactgataaaaaggacagacccaag
gatgacattaccatagaaacaatcaaagtatttgtcaatccctttgaggaagcagatgaa
aagctcaggatacagagagaaaaggatgccaaggaaaagaaggaagcagaaatgaaagca
acatcagttgtactaaagacagaagaggctccgaaaacctacagatctggtgttggcaag
tacatctcacccacgccaagcacatccaagagattaacggaagaggaatccacatcgtca
tacacatcaaaaaagaaagcaaagagttctggaggatttggaaatttcagttcttggtaa
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