Ptychodera flava: 139147244
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Entry
139147244 CDS
T10724
Name
(RefSeq) E3 ubiquitin-protein ligase TRIM71-like
KO
K12035
tripartite motif-containing protein 71 [EC:
2.3.2.27
]
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139147244
04121 Ubiquitin system [BR:
pfll04121
]
139147244
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
139147244
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139147244
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
TRIM/RBCC proteins
139147244
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NHL
Filamin
DUF5128
SGL
zf-B_box
zf-RING_UBOX
zf-C3HC4
zf-C3HC4_2
Vgb_lyase
ANCHR-like_BBOX
Invasin_D3
zf-RING_5
zf-C3HC4_3
DUF5711
zf-RING_2
Prok-RING_4
zf-C3HC4_4
Neurexophilin
Big_1
Motif
Other DBs
NCBI-GeneID:
139147244
NCBI-ProteinID:
XP_070574370
LinkDB
All DBs
Position
13:6709485..6715418
Genome browser
AA seq
775 aa
AA seq
DB search
MAAFSDELNGQLSCPICRDRFIDPKVLPCLHTFCRRCLDGKAEPGLLICPTCHHEVSLGD
AGIDSLPSNYLLNNIMDVVGTQDDDLENGFRDLSDKRRLCSSCDDGQVATSLCRDCNESL
CDSCVLAHNRVRLTKDHHIVQLNNSSSTFPFNSRSDLLSSSSFLTTSLQSLAQPASNRQL
SYCEIRGHENEVLRLYCDTCSQAICRECTMVDHRGHSCLYLQDAVQNCKAITSRLLADAK
MGVQAMEEGIAMAQNMAERVEVRAQAVATEVRATIRRHMNALEERERDLLHRVEKIRQVK
GKSLHIQVEDLKQALGGVTQCLETVESVLQKGNDIEVLKTKDRMVCQLQDLKAMRGHLQP
HEDEALLFTPPDAALHTAISSMGIISSSAYAPNSTATGDGVKRALRGKIALFMVQAKDHQ
GEPRCIGGDQVNVIVQGPEGGLYHAEVIDRQNGTYTVSYRPQVEGEHHISVTLRGKHIVD
SPFKVQVKSGRNYANIGPMVRMFGSEGEAAGQLCRPWGVCTDKDGHIIVADRSNNRIQIF
HPSGRFVHKFGSAGSRNGQFDRPAGVAVDNQNHIIVADKDNHRIQMFTLEGQFVLKFGEK
GVKNGQFNYPWDVAVSPDGRILVSDTRNHRIQLFAPDGTFLNKYGFEGALWKHFDSPRGV
AFNHEGHMVVTDFNNHRLLVIHPDFQSARFLGSEGSGNGQFLRPQGVAIDPEGHIIVADS
RNHRVQVFTPNGNFLCKFGSPGTGQGQLDRPSGICVSPEGQIIVVDFGNNRVQVF
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atggccgcgttttcggacgagctaaacggacagttatcgtgtccgatatgtcgagaccgc
ttcatagacccgaaagtattgccatgcctacacactttctgccggagatgtttggatggg
aaagcagagcccggcttgctgatatgtccgacatgtcatcacgaggtttcgctgggtgac
gctggtatagatagccttccgtctaattatctccttaataacatcatggacgtcgtgggt
acacaggacgatgacttggaaaatggcttcagggacttgtccgataaacgccggttgtgt
agctcgtgtgatgacggccaggtggctacgtcgttgtgtcgggactgcaacgaaagcctc
tgcgatagttgtgtgctcgcccacaaccgagtgcggctaaccaaagaccatcacatcgtg
cagctgaataattcgtcgtcaacgtttcctttcaactccaggtcagacttgctttcatcg
tcttcgttcttgacaacatctttgcaatccctggcccagccagcatccaaccggcaacta
agttactgcgaaattcgcggccacgaaaatgaggtgctacgtttatactgcgatacgtgt
tcacaagcaatatgtcgggaatgtaccatggtcgatcaccggggccacagttgcttgtat
ttgcaagacgccgtacagaactgtaaagctataacatcacgactacttgccgatgcgaaa
atgggagtacaggcaatggaagagggcatcgccatggctcaaaacatggcagagcgggtc
gaagtgagagcccaggcagtcgcgaccgaagtccgagctacgatacggcgacacatgaac
gcactcgaagagcgtgaacgcgacttgctacacagagttgaaaaaatccgacaggtaaag
gggaaatcgcttcacatacaagtcgaagacctgaagcaggccttgggtggcgtgactcag
tgcttggaaactgttgaatcggtgctacagaagggcaatgacattgaggttctgaaaacc
aaagacagaatggtgtgtcaacttcaagacctgaaagctatgcgtgggcatttacaaccg
cacgaagacgaagctctgcttttcacaccgcccgatgctgctctacacacggccattagc
tcgatggggattatcagcagtagtgcatatgcacccaactcaactgctacaggcgatggg
gtaaagcgggcactacgaggcaagatagctctgttcatggttcaagccaaagaccaccag
ggtgagccacggtgtataggtggtgaccaagtcaatgtgatcgtgcaaggtccagagggt
ggactgtaccatgcagaagtcatcgaccgtcaaaatggcacttacactgtcagctaccga
cctcaagttgaaggcgagcatcacatctcggttacactgcgaggaaagcacatcgtggat
agccctttcaaagtgcaggtcaagagtggtcgtaactatgctaatattggtccaatggtc
cgcatgtttggctcagagggagaagctgctggccagctttgtcgaccatggggtgtgtgt
acagacaaggatggccatattatagtagctgaccgcagtaataatcgcatccaaatattc
cacccaagtggtagatttgtgcataaattcgggtctgcagggtcacgcaatgggcagttt
gaccgaccagcgggagtggcagtggacaaccagaaccacatcattgtagctgacaaggat
aaccaccgcatacagatgttcactcttgaagggcagtttgtgctgaaatttggagagaaa
ggagttaaaaatggtcagtttaactacccatgggatgtggctgtgagcccagatggaaga
atactggtatctgatacgcgcaaccaccgcatacaactatttgcccctgatggtactttc
ctcaacaaatatgggtttgagggtgccttatggaagcattttgattcacctcgtggcgtt
gcatttaaccatgaggggcatatggttgtcaccgacttcaacaaccatcggctgctggtc
atccatccagacttccagtcggcgcgtttccttggatctgaaggcagtggcaacggccag
tttcttcggcctcagggagtggccatcgatccagagggccacatcatagtagcagattcg
cgaaatcatcgtgtgcaagtcttcacccccaatggtaatttcttgtgcaagtttgggtct
cctggcaccggacagggccaactggatcgtccatctggtatctgcgtgtcgccagaggga
cagataattgttgtcgattttggcaacaaccgcgtgcaggtcttctaa
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