Ptychodera flava: 139147734
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Entry
139147734 CDS
T10724
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pfll Ptychodera flava
Pathway
pfll04137
Mitophagy - animal
pfll04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
139147734
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
139147734
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pfll04121
]
139147734
Enzymes [BR:
pfll01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
139147734
Ubiquitin system [BR:
pfll04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
139147734
Multi subunit type E3
ERAD complex
139147734
LMBR1L-GP78-UBAC2 complex
139147734
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4_2
zf-C3HC4
CUE
zf-C3HC4_3
zf-RING_UBOX
zf-RING_11
zf-rbx1
zf-ANAPC11
G2BR
zf-RING_5
zf-RING_16
RING_XB3-XBAT31
FANCL_C
Prok-RING_4
zf-C3HC4_4
zf_RING_Vps8
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
139147734
NCBI-ProteinID:
XP_070575002
LinkDB
All DBs
Position
13:complement(19561560..19586742)
Genome browser
AA seq
811 aa
AA seq
DB search
MPVLLLNRIPLPSLRTYTAISVFMVCLSFWYAHQVTLEIKLNQVLKNIITAEEAERLTNS
IPDGGQAVEVVYGASNAPDQAEGQDIQQKGTQENHNGTYFTFVDEFVTRESKVLEREETV
GDAQVQGEPPAEGEGEIIPDEVDGAEEVQRETQEGDGDSQMYQDNVGENKVIKEKVELSH
FEQLLNIMFQEAWCVWSIINMGYCCLLLLGKVVQYFVFGPLRVSERQHLKDKFWNFLFHK
FIFVFGVMNVQSMGEIFLWSTWFSILGFLHLLTQMSKDRFEYLSFSPTTPRWTHIRVLTL
LSIILLTCVSLMGVSIWVGVQLGLHLFAFMSAECVLLTIKTLYVVIRYAIHLWDLNHDGL
WENRSAYVYYTELSMELSALTVDFFHHLHMLLWANIFLSMASLVICMQLRFLYNEIQRRI
KRHRNYRRVVNNMEARFASATAEELAANDDDCAICWDRMSSARKLPCGHLFHNSCLRSWL
EHDTSCPTCRKSLNVTPGRTVPDSEDETERQPPPGQRVDLARVLQAQRMAPPPGGRVNRR
NHFFHFDGSRIASWMPSFSVEVTHTEVLGHRPRATNSQLDNMARQVQGIIPHVPLNTILA
DLQITRSVELTVDNILEGRIEIPQTGIFEAETPPVQVHADEEPGTSEASTTANESETSVS
QPSTSSDTPQSHNIAANFSDPSGSDTSSETEGAAASSSSNRSSNIGGIEALSGRFSKSPS
EREAMLAQRKQTLLHKAKRRYSAKQEQETTEEEIEAESIASIRHVTPHHIDTPDDNSGSS
ESERERRRALALEAAQRRLEQQQYGLHLHED
NT seq
2436 nt
NT seq
+upstream
nt +downstream
nt
atgccagtccttttgctcaaccgtatacctttaccaagccttcgtacttacaccgcgatc
agcgtgttcatggtatgcctgtcattctggtatgcccaccaggtaacacttgaaatcaaa
ctgaaccaggtgttaaaaaacatcatcactgccgaggaggcagagagactgaccaattcg
atacccgacggtgggcaggcagtggaggttgtctacggcgcaagcaacgctccagatcaa
gcggaaggacaggacatacagcaaaaagggacgcaagaaaatcacaatggaacatatttt
acatttgtagatgaatttgttacaagggaaagcaaagttctcgagagggaggagacagta
ggggatgcgcaagttcaaggcgaacccccagcggaaggggagggagaaataattccggat
gaagttgatggcgcagaggaagtacaaagagaaacacaagaaggggatggagatagtcag
atgtaccaagataatgttggagagaataaagtgattaaagaaaaggtggaattgagtcat
tttgaacagttgttgaacatcatgtttcaagaggcatggtgtgtttggtcaatcatcaat
atgggatactgttgtctgctgttgttgggtaaagttgttcagtactttgtatttggacca
cttagagtcagcgagcgacagcatctgaaggacaaattctggaactttctgtttcacaag
ttcatatttgtctttggagtgatgaatgttcaaagcatgggtgagatcttcctctggtca
acgtggttttccatcctaggttttcttcatctgctgacacaaatgagtaaagacagattt
gaatatttgtcattttcaccaactacaccgagatggacccatatcagagtattaacactg
ctatctattatcctgcttacctgcgttagtctgatgggtgtcagtatctgggtcggcgtt
caacttggtctccacctctttgctttcatgtcagcagaatgcgttctgctgaccatcaaa
accctgtatgttgttatcaggtacgccattcatctgtgggatctcaaccatgatggatta
tgggagaatcgtagtgcctatgtttactacacagagctgtcaatggagttatcggcattg
accgtagatttcttccaccatctacatatgctgctatgggccaatatcttcctgagtatg
gctagcttagtcatctgtatgcagctgagattcctgtacaatgaaattcaacggagaatc
aagagacatagaaattacagaagagttgtcaataatatggaagccagatttgcttctgcc
acagcagaggaactggcagccaatgatgatgactgtgctatttgctgggatagaatgtcg
tcagccaggaaacttccatgtggtcacctcttccacaactcttgtctgaggtcctggttg
gaacatgacacatcctgtcctacatgccgtaaatctctcaatgtaacaccgggacgcact
gtccccgactcagaggatgagaccgagagacagccccctccaggacaacgagttgacctg
gcacgtgtcttgcaagcccaaagaatggcaccacctccaggtggaagagtcaacagaagg
aaccatttcttccattttgatggttcaagaatagcaagctggatgcccagcttttcagtt
gaagtgacccatactgaggtattgggtcatcggcccagagccacaaactcccagcttgat
aacatggctcgccaagtccaaggtataattccacatgtcccattaaatactatattagca
gatcttcagattacaagatctgttgaacttactgttgataatatccttgaaggcagaata
gaaataccacaaacaggaatttttgaggcagaaaccccaccggtgcaggttcatgcagat
gaagaaccaggaacatctgaagcatcaacaacagccaatgagtcagaaacttctgtgagt
caacccagcacatccagcgatacaccacagtctcataatattgcagcaaattttagtgat
cccagtggcagtgacaccagtagtgagactgagggcgccgctgcaagttcaagtagcaat
agaagtagcaatattggtggcattgaagcacttagtggaagatttagtaaatctccatct
gaaagggaagccatgctggcccagaggaaacaaacccttctccataaggctaagaggagg
tactctgccaaacaggaacaagaaaccacagaggaagaaattgaggcggagagcattgcc
agtatacgacacgtaacgcctcatcacattgacacacctgacgacaacagtgggagcagc
gagtctgagagggagagaagacgtgccttagccttggaggcagcacagagaagacttgag
caacagcagtatggccttcacttgcatgaagattaa
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