Ptychodera flava: 139147862
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Entry
139147862 CDS
T10724
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 5-like
KO
K14397
cleavage and polyadenylation specificity factor subunit 5
Organism
pfll Ptychodera flava
Pathway
pfll03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
139147862
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139147862
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor Im (CFIm)
139147862
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Gene cluster
GFIT
Motif
Pfam:
NUDIX_2
NUDIX
Motif
Other DBs
NCBI-GeneID:
139147862
NCBI-ProteinID:
XP_070575177
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Position
13:complement(22691135..22713677)
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AA seq
226 aa
AA seq
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MATTARQQGGAGWPKGSSYSHRYPVATSSMSIERTINLYPLTNYTFGTKDPLYEKDASVA
ARFQRMREEFDKIGTRRTVEGVLIVHEHGLPHVLLLQLGTTFFKLPGGELKPGEDESEGL
KRLLTETLGRQDGVQQDWIVEDVIGNWYRPNFEPPQYPYVPAHITKPKEHKRLYMVQLGE
KALFAVPRNYKLVAAPLFELYDNAPGYGPIISSLPQLLSRFNFIYN
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggcgactaccgctagacagcaaggtggcgctggctggcccaaaggatcttcatacagt
cacagatatcccgtcgcaaccagctcgatgagcatcgaaaggacgataaatctgtaccca
ctgacaaattacacatttggcaccaaggaccctctgtatgagaaagatgcgtcggtggca
gccagattccagcgaatgagagaggagtttgacaagattggcaccaggcggactgtagag
ggcgtactcatagtgcacgagcatggcctcccccatgtgctgttgctgcagctaggaacg
actttcttcaaactgcctggaggggagctgaagccaggggaggatgaaagtgagggactc
aaaagactcctcacagagacactaggccgacaagacggtgtacagcaagattggattgta
gaggatgtcattggtaactggtataggccgaactttgaacccccacagtacccatatgtt
cctgcacacatcacaaaaccaaaagaacacaaaagactatacatggtacagctcggagag
aaagcactgtttgctgtaccaaggaactacaaattagtcgcagcacccttatttgaattg
tacgacaatgcacctggctatggtccaattatctccagtttacctcagctacttagcaga
tttaacttcatctataattaa
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