Ptychodera flava: 139148497
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Entry
139148497 CDS
T10724
Name
(RefSeq) enhancer of mRNA-decapping protein 4-like isoform X1
KO
K12616
enhancer of mRNA-decapping protein 4
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139148497
mRNA degradation factors
5'-3' decay
Decapping complex
139148497
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
139148497
NCBI-ProteinID:
XP_070576075
LinkDB
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Position
13:41961296..42029686
Genome browser
AA seq
1437 aa
AA seq
DB search
MEPSSSSSLSTDEATQLLKDMLNVGKSFGLSSDSSLQSTTDAVPKQATGDRSGTSTMNGT
SSSQQIPNDGSGEEGTELPVSLGTAGRSAGEITTRQQILLQGSDRTGSVPIYAKDVTIVE
SEAASVANTTAGSSKVKISPVTNYDWELKYYTGNLVAINNTYVAYALKGRDSYVVRVINF
KTSDRVLLKGFSGVVIDLAFGHLNSNTLACIDEQGNLFVWDLAEQDSKIIYNVRVIVKRP
PNTPYSEHHRVIWCPYIPEDLSDTGSSNTSNADDDVRLLAITHDQKAEVWDLDVVAGNHG
DTPVSISEVKEGVITIDGHDKPISQAALSPDGAVLATASLDGSVKFWQVYLESSDPPRRL
HQWTPHGGRPVSCLLFCDNHKFQDPNLPFWRFLLTGADFNREIKVWCTVSWTCLQTLQFL
SPSHLLPDPCMKAVLDLSAGYLVMSDIKRKVLYVLEVFQDVEKGYAHISSISEFLLTLPM
LSFAVLDAGRKKFKHLSDDVDEDADPDVDEDDTADVSRSGEKDELASSTNQIGVVIKMYC
VHTKALQELQVRFKPQSSVMSLQEQIAASISTISQDEIGLRDPLSDLDQSTDVEGSQSDL
HLADNRMEEEDDNDQAPTPTPGTSMTSSFTSESARSPHHQPVLLPPGAFTSTTPKQSPQQ
ILRESQSSTSSLTAVSGINSSIDDMLSTEESHNISESTVTLTPSTHRMHELSDVATPSSL
PLPPITPSEASTSHSQEIDIDILEKSALEGEHEEQMAMPQMETTTEFNTDPHQAEKRDSS
SSIELVGNSTPREDISPEIEIVPEPGDDDTQTLTEDVQHSSLEDQGNNTIIDKAVKIEQD
SSVTASNNLVSQETKAGGSGYQETLSESSEARVTPVHLQDQDDKGSAGQASSISNQPDIE
VSQPVIDTQQLLQKVMAEQEPKSEPSDHESAEVASISSSSSVPGKDKIHKKEMRRERRAR
GSPRPKKIMEDERAAEVTVGLKQLMSMIQSQQQEIKQLRQDIQKHQLNNSLVQTMKSKMD
SLERRMGSKIDTAMAQQSQEERHRLDMALSEKQTMDKQKQEKLLETVSQTLSTTITQKLE
KTVKVEMKNSVVPAVNRVVEPLKEQLHQSVAQKLTATDSLMKENIGKLVRARSTTEAIGQ
AAANTVQNAMQSTFKDTFQSSVVPAFDKACQSMFQQINETFQSGTQEYMQQLDNHLEKRR
QQIQEGRDPLLDKLQSMVDSFQASSTQIRNSVVSSMQAELDNQLQKSMDSLQSVLVNKVR
DIVKDEVNHAMKDHQAVVESSIVSAITRSSAATPVPSHIDTQQLQMQLVQMIQQGQFNTA
FQTALSASDLSIVVFVCQTVQPHQVFSPQPCPLNQPVILSLVQQLSAELENDTELKQKYL
EEAVMTLDPTDPVAREHMPGVVMGLVQKIQIFVQNYPQHEMTRPLRRVAMLAQSLLK
NT seq
4314 nt
NT seq
+upstream
nt +downstream
nt
atggagccatcatcgagctcatcactgagtaccgatgaagccacgcagcttctgaaagac
atgttgaacgtggggaaatcctttgggttatcttcagactccagtcttcaaagcacaact
gatgcagttccaaagcaagcgactggtgatcgatctggcacatctacaatgaatggtaca
tcatcatcacaacagatacccaatgatggcagtggggaggaaggtacagaattaccagtc
tctttaggtactgcaggaagaagtgcgggtgaaattaccaccagacaacaaatattactt
caaggtagtgaccgtacaggaagtgtcccaatctatgccaaagatgtaaccatcgttgaa
agtgaagctgcttcagtggccaatacaacagcaggaagcagtaaggtgaaaatatctcca
gtgacaaattatgactgggaattgaagtactatactggtaacttagtggccatcaataac
acatatgtagcttatgcactgaaaggtcgtgatagctacgttgtaagggtaatcaacttc
aagacatcagatcgtgtacttttgaagggttttagtggtgttgtgatagatcttgccttt
ggtcatctcaattctaacacactggcttgcattgatgaacaaggcaacttgtttgtttgg
gatttagcagagcaagatagcaagataatttataatgttagagtcattgtaaaaagacca
ccaaatacaccatacagtgaacatcatcgtgtcatatggtgtccatatatccctgaagat
ttgagtgatacaggttcaagtaacacatccaatgcagatgatgatgttagattgctggcc
ataactcatgatcaaaaggctgaagtgtgggatctcgatgtagtagctggaaaccatggc
gacactccagtatcgataagtgaagtcaaagaaggagtaatcaccatagatggacatgac
aagcctatcagccaagctgccttgtcccctgatggcgctgttcttgctactgccagtcta
gatggctcagttaaattttggcaggtgtacctggaaagtagtgacccaccacgacgactt
catcagtggaccccccatggaggcagacctgtgtcatgtcttctcttctgtgacaaccat
aaatttcaagatccaaatttaccattttggaggttcttattgactggtgcagacttcaac
cgagaaatcaaagtatggtgcacagtttcttggacctgtctacagacattacaattttta
agtccaagtcatttactaccagatccatgtatgaaggctgtactggatctgtcagctgga
tatctggttatgtcagatatcaaacgaaaggtgctgtatgttcttgaagttttccaagat
gtagagaaaggatatgcacacatctcatccatctcagaatttttgcttactttgcccatg
ttgagttttgcagtcttggatgcaggccgaaagaaatttaagcatttatcagatgatgta
gatgaagatgctgacccagatgttgatgaagatgacacagctgatgtgagcagatctgga
gagaaagatgaattagcaagcagtactaatcaaattggcgttgtcatcaaaatgtactgt
gtgcataccaaggctttgcaggaacttcaagtccgtttcaagcctcagtcttctgtcatg
tctcttcaagaacaaattgctgcatctatcagtacaatatcacaggacgagattggtcta
agggatccactgtcagatcttgatcagtctacagatgttgaaggctctcaatctgattta
catttggctgataatcgaatggaagaggaagatgacaatgatcaagccccgacgccaaca
ccaggaacttccatgactagttcatttacttcagaatctgcaagatcaccacaccaccaa
ccagtgctgctacctccaggtgcattcaccagcactacgccaaaacagtcacctcagcag
atattgagagaaagccagtcttccaccagcagtttgaccgctgtgtctggtatcaacagc
tctatagatgatatgctttctacagaagagtcacataacatctcagaaagtacagtgacc
ctgacaccatccacccatagaatgcatgaactcagtgatgtagcaacaccaagcagttta
cccctccctccaattaccccaagtgaagcaagcacctcacattctcaagagattgacatt
gatattcttgaaaagtcagctctagaaggagaacatgaagaacaaatggcaatgccacag
atggaaaccacaacagagtttaatacagatccacatcaggcggaaaaacgtgactcaagc
tccagcattgaattagttggtaacagcacacccagggaagacatatctccagagattgaa
attgtcccagagccaggggatgatgacacacagacattgactgaggatgtacaacactca
tcattagaagatcaaggaaacaacacgatcattgacaaagcagtgaaaattgaacaggac
agtagtgttaccgcaagtaataaccttgtcagtcaagaaacaaaggctggaggaagtggt
tatcaagagactttgtcagaaagctctgaggcaagggtaacaccagttcatcttcaggat
caagatgataagggaagtgctggtcaagcaagcagtatatcaaatcagccagacattgaa
gtttcccagcctgttattgacacacaacagctcctacaaaaagttatggcagaacaagaa
cctaaaagtgaacccagtgaccatgagtctgcagaagtggcatcaatatcttcaagttca
agtgttcctggtaaagacaaaattcacaagaaagaaatgagaagagaaagaagagccaga
ggatcaccaagaccaaagaagattatggaagatgaaagagctgccgaggttactgttggg
ttgaagcagctgatgtcaatgatacagtcacaacaacaagaaatcaaacaactacgacaa
gatattcagaaacatcaactcaacaattcactggtacagacaatgaagagcaagatggac
agtctagaacgaagaatgggaagtaaaatagacactgctatggctcagcaatcacaggaa
gaaagacacagacttgacatggctttgtcagagaaacagacaatggacaaacagaaacaa
gaaaaacttttagagactgtgtcacagacattaagtactaccatcactcagaaactggaa
aagacggtcaaagttgaaatgaagaattcagtagttccagctgtgaatagagtagtggaa
cctctcaaagagcaacttcatcaatctgtggctcagaaattgactgcaactgattcactc
atgaaggaaaacattggcaaattggtcagagccaggtcaacgacagaagccattggtcaa
gcagcagctaacacagtacagaacgcaatgcaatcaactttcaaagatacttttcagagt
tcagtggtaccagcatttgataaagcttgccagtctatgtttcaacaaattaatgagact
tttcaaagtggtacacaagaatacatgcagcaactggataatcatctagaaaaacgaaga
caacagattcaagaaggcagagatcctcttcttgataaactacagagtatggttgattct
ttccaagccagctcaacacagattagaaatagtgttgtcagcagcatgcaagcagagtta
gacaaccagttgcagaaatctatggacagtctacaaagtgtgctggttaacaaagtgaga
gacattgtcaaagatgaagtcaaccatgctatgaaggatcatcaggctgttgtagagtct
agcattgttagcgccatcacacgatcatcagctgccacaccagttccttcacatattgat
acacagcagttacagatgcaactagtacaaatgattcaacaagggcagttcaacactgct
tttcaaactgcgctgtctgcttctgatctgtccattgtggtctttgtatgccaaactgta
caacctcatcaggtgttcagcccacagccctgtccattaaaccaacctgttatactctca
ctggttcagcaattatctgcagagttagaaaacgacactgagttgaaacagaagtatttg
gaagaggcagtgatgacccttgaccccaccgatccagttgcacgggaacacatgccaggt
gttgtgatgggattagtccagaaaatccagatatttgtccagaattaccctcagcatgaa
atgacgcgtcccttacgcagggtggctatgctagcacagtctctattgaaataa
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