Ptychodera flava: 139148910
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Entry
139148910 CDS
T10724
Name
(RefSeq) endoribonuclease Dicer-like
KO
K11592
endoribonuclease Dicer [EC:3.1.26.-]
Organism
pfll Ptychodera flava
Brite
Chromosome and associated proteins [BR:
pfll03036
]
Eukaryotic type
Gene silencing
RISC (RNA-induced silencing complex)
139148910
microRNA pathway
RISC loading complex
139148910
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GFIT
Other DBs
NCBI-GeneID:
139148910
NCBI-ProteinID:
XP_070576462
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Position
14:1365260..1405353
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AA seq
1849 aa
AA seq
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MTSEENLTAMDVDYSASDIDVQIEDNGVPQLFYQEILHSFTPRAYQVELLERALEKNTVV
CLQTGGGKTFIAVMLIKELAHHIRKEFQEDGKRTFFLVNTVPLVAQQAGVIRTHTDLSVG
EYVGAMGVDFWKGEKWNEEFSKHQVLVMTCQIFLDILLHGFLAMSRVNLLIFDECHRAVK
NHAYREIMKLYDVCPKEEYPRVLGLTAAILNGKCDPAKLECRLRDLEKTMRGTAETATDT
TLVSQYGTKPKEIVILCQSYHDENNLTEEILEILQKAREFLDDCKVNVDDEDEPEQDPRV
VPKKALSECQSALLVLGPWCANMVSQLMIKELEKLEFHQTLEMNKLLIRFTMTTLRMIYM
KCTEVFGCGHKVNLKYLTPKVKKLLEILKQYKPQVAESPHSAVPKETTEQNFNSAAGSAS
DLDMEVNSTDSQNDTSIPNSVTAIDNQTTSVKTEGNSSHQENSLTRTKIHQKQKQFNYYG
EQQVGASGLSSLCGVVFVEQRYTAVVLNQLLKDLSRQDPDLQHLSTSEITGHGLRSSVSG
GHAEMAYKRQEEVLRQFRRHETNLLVATSVIEEGVDVPKCNLVVRFDPIKEYRSYVQSKG
RARAPESFFIMMVNSIDKESFIKDLKQFKCIDKILERICHGREMPSEDDIDSHMADTLLP
PYMPNKEDGKARVTMTSSIPLINRYCAKLPSDAFTHLTPKCKTEQIENTDSPLFKSTLYL
PINSPLRQPIEGPIMKRKTFAEMAVALRTCEFLHKAGELDDHLLPVGKEVVPYEDRDTFD
EEIDSDGPRPGTTKRRQYYCKQVADALQHNLPGVNKQCHLYVIKMVLTLPLPDILNTRGR
KHYHPEDSSQGFGVLISKKIPGIPSFPVYTRSGKVSVAMELSASSIRISKEKMIQIRKFH
RCIFTEVLRLEKPSMKYDPGNSLAKYYVVPVLKGENDGEETHEIDWTFLELISQSSGKLD
HQKPTQYSVYQPFEFDVTKYEDAVVTPVYRNFDQPQRYYVAEMSDLTPDSKFPSALYPTF
AEYYYQRYALEVTNSEQKLLDVDYMSSRLNLLTPRYLNHKGKALPVTSAQTKKEKQENLQ
NKQFLVPELCYVYPIPASLWRKAVCLPSILYRLNGLLLAEELRALVAREANVGMATLSED
FKFDDLSFGWDEFKIDEQKDGLDAESDGDGECDWPSIGSSEDDDNDFFDFSDPVEFQVGD
ETLQALNKIKMLSADETLEQCQAIAEDVENDLGWEDDTGIHHMISFSGTSNREAPKSIGS
LADAEEEKAVDIFAEMDMFDFKFAGRNKQKLEQIPEAVEPVEFIAVSSEVESNEAATPPD
KLDDCTTDEELQLKSGPNPALILQALTMSNASDGFNLERLEMLGDSFLKQAVTTYLYCTY
TDLHEGKLSYMRSKQVSNLNLYRLGKKQNLPGRMVVSLFDPPVNWLPPGYVVLPPERRQP
APTKDKSFEIGYWGDCDKVDNFKAEPDVPYDLHSEQSLSDKSVADCVESLIGCYLVSCGF
RGTLLFMSWLGIKVLPTIKNDEGRSCNEAKTTQNGANITKNSTSETGDGGVDENVKNKPQ
QYGYLQAPGSPLFTHISHAEERLCHLLSGYENFEKKINYEFKDKAYLLQAFTHASYHYNT
ITDCYQRLEFLGDAILDYLITKHLYDHHKHHSPGALTDLRSALVNNTIFASLAVKYDYHK
YFKAIAPELFHVIDNFVKFQHATEETQGIDSQLNCNFSDDEDEEEEGEEREDIEVPKALG
DIFESVAGAIYLDSGMSLDAVWRVYYSMMKPHIEKYSAKVPISPVRELLEMEPETARFGL
PEKTMDGKTRVVVTVAGKGTYRGIGRNYRIAKSAAARRALRSLKAKKDP
NT seq
5550 nt
NT seq
+upstream
nt +downstream
nt
atgacttccgaagagaacttgacagcgatggatgtggactactctgccagtgacattgat
gtccaaatagaggataatggggtgccacagctgttctatcaagaaatcctgcatagtttt
actccaagagcatatcaagttgaattactggagcgagcattggaaaaaaatactgtggta
tgtctgcagactggtggtggcaagacgttcatcgctgtcatgctgatcaaggaacttgct
catcacatcagaaaggaatttcaagaagatggaaagaggaccttctttttggtgaacaca
gttcccttggtagcacaacaagctggtgtcatccgaacacatacagatttgagtgttggt
gaatatgttggtgcaatgggcgttgacttctggaagggtgagaaatggaatgaagaattt
agtaaacatcaggtgttggtgatgacatgtcagatttttctggatattctgctccatgga
ttcctggcaatgtcaagagtcaatctcctgatatttgatgagtgtcaccgtgctgttaag
aaccatgcatatagagagatcatgaagctgtatgatgtgtgccctaaggaagaatatcca
agggtgttaggcctcactgcagctatactgaatggcaaatgtgacccagccaaactagaa
tgtaggcttagggacctggagaagaccatgaggggaactgcagaaactgccacagataca
actctggtcagccaatacggtacaaagcctaaagagattgtaatcctgtgccagtcatac
catgatgaaaataatctcaccgaggaaattttagaaattcttcagaaggctagggaattc
ttagatgattgcaaagtaaatgttgatgatgaagatgagccagagcaagacccaagagtg
gtgcccaagaaagcattgtcagaatgtcaatctgctctgcttgttttgggtccctggtgt
gccaacatggtatcccagctgatgattaaggaacttgaaaaactggaatttcatcagacc
cttgaaatgaacaaacttctcatccgcttcaccatgacaactttacgaatgatttatatg
aagtgtacagaagtgtttggctgtggccataaagtcaacctcaaatatctgactcccaag
gtgaagaaacttcttgagattctcaagcaatacaaaccacaggttgcagaaagtccccat
tctgccgtgccaaaagaaaccactgaacaaaatttcaactcagctgctggatcagcatca
gatcttgatatggaagtcaattctaccgacagccagaatgatacaagtatccctaacagc
gtgacagcaattgacaaccaaacaacatcagtgaaaaccgaaggcaactcaagccaccag
gaaaacagtcttactcggactaagatacaccagaaacaaaaacagttcaattattatgga
gaacagcaggtaggcgcctctggtttatcctcactctgtggtgttgtctttgtagaacaa
aggtacacagctgttgttctgaaccagctgctgaaagatctcagccgccaagatcctgac
ttgcagcacttatctacgagtgagatcaccggacatggactcagatcatctgtatccggt
ggccatgctgaaatggcttacaagagacaggaagaggtgcttcgtcagttccgcaggcat
gagaccaacctgctggtggccaccagtgtgattgaagaaggtgttgatgttccaaagtgt
aatcttgtggtgcgatttgatccaattaaagagtacagatcgtatgtgcaatctaaagga
agagccagagctccagagtcctttttcattatgatggtcaacagtatagacaaagagtct
tttatcaaggatctcaaacagttcaagtgtattgacaagattttggagagaatatgccat
ggcagagagatgccatcagaagatgatatagattcacacatggctgacactttgctacct
ccatatatgccaaataaagaagatggtaaagctagggttaccatgacctccagcatacct
ttgataaacagatactgtgccaaattaccaagtgatgcctttacccatcttacacctaaa
tgtaagacagaacagatagagaatactgattctccactcttcaagtcaaccttatactta
ccaatcaactcaccacttcgacaaccaatagaaggtccaattatgaaaaggaagactttt
gcagaaatggcagttgctttaagaacttgtgaatttttacataaagcaggtgaacttgat
gaccatttactcccagttgggaaagaagttgtaccttatgaagacagggacacctttgat
gaggagatagacagtgatggacctcgtccaggtactaccaagaggagacagtactattgt
aagcaggttgctgatgcgttacagcataatttaccaggtgtgaataaacaatgtcattta
tatgtgatcaagatggttttaactctaccactgcctgatatcctgaacactcggggcagg
aagcactatcatcctgaagacagctcacagggcttcggtgtcctcatctcaaagaaaata
cctggtattccaagctttccagtttacactcgctctggtaaagtcagtgttgccatggaa
ttgtctgcatcttcaatacgaatttccaaggagaagatgatccaaattcgcaaattccat
cgttgcatatttactgaagtactaagactggaaaagccttcaatgaagtatgatccgggc
aattctcttgccaaatactatgttgtaccagtacttaaaggtgaaaatgatggagaagaa
actcatgaaatagactggacgtttttagaattgatcagccaatccagtggcaaacttgac
catcagaaaccaactcaatattctgtgtatcagccatttgaatttgatgtaacaaagtat
gaagatgctgtagtgacacccgtctaccgcaactttgaccagccacagcggtattacgtt
gctgagatgtcagaccttactcctgacagcaagtttccatcagcactttacccaacattt
gctgaatattactatcagagatacgctctagaagtgacaaactcggaacagaagttactt
gacgttgattacatgtcttcaagactaaatcttctaactccacgctacctcaatcacaag
ggaaaagcactgcctgttacttcagcccagaccaagaaagagaaacaggaaaatcttcag
aataagcagtttttggtgccagagctctgctatgtttatcccattccagcatctctgtgg
agaaaagccgtgtgtctaccaagcatcctgtaccgtctgaacggtcttctccttgctgag
gaactgcgagctctggtagctagggaggcaaatgttggcatggcaacactgtcagaagat
ttcaagtttgatgatctgagttttggttgggatgagttcaagattgacgaacaaaaagat
ggcttggatgctgagagtgatggtgatggtgaatgtgactggccaagtataggatctagt
gaagatgatgataacgacttctttgatttcagtgaccctgttgagtttcaggttggggat
gaaacgttacaagccctgaataaaatcaaaatgctgtcagcagatgaaactcttgaacag
tgtcaagctattgctgaggatgtggaaaatgatcttggatgggaagatgataccggcata
catcacatgatctcattcagtggtaccagtaatcgggaagcaccaaagtcaatcggtagc
ctggcggatgctgaggaagaaaaagctgtcgatatcttcgctgagatggatatgtttgat
ttcaaatttgctggtagaaacaagcaaaaacttgagcagatcccagaggctgttgagcca
gttgagttcatagcagtgtcttctgaagtagaaagcaatgaagcagccacaccgccagat
aagctagatgactgcaccactgatgaggagctgcaactcaaatccggtccaaatcctgct
ctcattctacaagccttgacaatgtccaatgcaagtgatggtttcaacctggagaggctg
gagatgttgggtgattctttcctcaagcaagcagtgacaacctatctgtactgcacatac
acagacttgcatgagggcaagctgtcctatatgagaagcaagcaagtcagcaatttgaat
ttataccgccttggcaagaagcagaacctaccaggtcgtatggttgtgtctctttttgat
cccccggtcaactggctcccaccaggatatgttgttcttccaccagagagaaggcagcca
gctcctaccaaagacaaatcttttgagattggttactggggagattgtgataaagtggac
aacttcaaagcagaaccagatgtcccgtatgacctccatagtgagcaaagtctgtcagat
aagagtgtagcagactgtgtagaatccctgataggttgttatctggtatcctgtggtttc
cgtggcacactccttttcatgtcttggttgggaatcaaagtattaccaacaataaaaaat
gatgagggccgaagttgcaatgaggctaaaacaactcagaatggtgccaatataaccaag
aattccacttcagagacaggtgacggtggtgtagatgaaaatgtgaagaataaacctcaa
cagtacggctatcttcaagctcctggatctccattgtttactcacatatcacatgcagag
gaaagactctgtcatttattgtcaggatatgagaattttgaaaagaagatcaactatgag
ttcaaagataaagcctatttgctgcaagcctttacccatgcatcatatcattacaataca
atcacagattgttaccaaaggcttgagtttttgggagatgccattctggactacctcata
acaaagcatctatatgaccatcacaagcatcattctcctggtgcacttacagacttgaga
tcagccctagtcaacaataccatctttgcttctctggctgttaagtatgactatcacaaa
tacttcaaagccatagcaccagaactgttccatgtcattgacaattttgtcaagtttcaa
catgccacagaagaaactcaagggatagactcccagctgaactgtaatttctcagatgat
gaggatgaagaagaggagggtgaagaaagagaagacattgaggttcctaaggcacttggt
gatatctttgaatctgtcgctggtgccatatatctagacagtggtatgtcactggacgcc
gtctggagagtctactattctatgatgaaacctcatatagagaagtactcagcaaaagtg
ccaatatcaccagtgagagaattactggagatggagccagagacagctagatttggtttg
cctgagaagacaatggatggcaagacacgggttgtagtgacagtggctggcaagggaaca
tatcgagggattggacgtaattaccgcattgcaaaatcagctgctgcaaggagagctctt
cgttcactgaaagctaagaaagatccttag
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integrated database retrieval system