Ptychodera flava: 139149208
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Entry
139149208 CDS
T10724
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
pfll03015
mRNA surveillance pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139149208
09122 Translation
03013 Nucleocytoplasmic transport
139149208
03015 mRNA surveillance pathway
139149208
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139149208
03041 Spliceosome [BR:
pfll03041
]
139149208
03009 Ribosome biogenesis [BR:
pfll03009
]
139149208
03012 Translation factors [BR:
pfll03012
]
139149208
Enzymes [BR:
pfll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
139149208
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139149208
mRNA cycle factors
Stress granule specific factors
139149208
Spliceosome [BR:
pfll03041
]
Complex C
Other components
EJC/TREX
139149208
Ribosome biogenesis [BR:
pfll03009
]
Eukaryotic type
90S particles
Helicases
139149208
Translation factors [BR:
pfll03012
]
Eukaryotic type
Initiation factors
eIF-4
139149208
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
AAA_30
UvrD-helicase
Motif
Other DBs
NCBI-GeneID:
139149208
NCBI-ProteinID:
XP_070576883
LinkDB
All DBs
Position
14:8442377..8451723
Genome browser
AA seq
398 aa
AA seq
DB search
MARRVLTAEATNIEFETSEEVDVTPTFDNMGIREDLLRGIYAYGFEKPSAIQQRAIKPVV
KGRDVIAQAQSGTGKTATFSISILQILDTQVRETQALILSPTRELAVQIQKVILALGDYM
SVQCHACIGGTNVGEDIRKLDYGQHVVSGTPGRVFDMIRRRNLRTRSIKLLVLDEADEML
NKGFKEQIYDVYRYLPPATQVVLFSATLPHEILEMTHKFMTDPIRILVKRDELTLEGIKQ
FFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVSSMHGDMPQ
KERDAIMKEFRSGASRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIGRSGRYGR
KGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1197 nt
NT seq
+upstream
nt +downstream
nt
atggcgcggcgtgtattgactgctgaagcgaccaatattgagtttgagaccagcgaggag
gtcgatgttacccctacattcgacaatatggggatcagggaggatctcctcaggggtata
tacgcatacgggtttgaaaaaccatcagcaattcaacagagagcaatcaaacctgttgta
aaaggcagagatgtaattgcacaggctcagtcaggtacaggaaagacagcaacattttca
atttcaattctccaaattcttgacacacaagtacgagaaacacaagccctcatcctgtca
ccaacaagagaattggcagtacagatacaaaaggtcattttagctttgggtgattacatg
agtgtccagtgccatgcctgcattggtggtacaaatgttggagaagatatccgtaaatta
gactatggccaacatgtggtatcagggactcccggtcgagtatttgacatgattagaaga
cgaaacctcaggacaaggtccatcaagttacttgtcctggatgaagcagatgaaatgttg
aacaaaggattcaaagaacagatctatgacgtttatcgttatctgccaccggcgacacag
gtagtcctgttcagtgccacactgccgcatgaaatccttgaaatgacccacaaattcatg
acagatcccatacgaatcttagtcaaacgtgatgaattgactctggaaggaatcaaacaa
ttctttgtggctgtggagagagaagaatggaagtttgacacattgtgtgacctctatgac
acactcaccatcacacaggcagtcattttctgcaatacaaagagaaaggttgactggctc
acagaaaagatgagagaagccaatttcacagtatcctccatgcatggtgacatgccacag
aaagaaagggatgctatcatgaaagaattcagatcaggggcaagtcgtgtattgataaca
acagatgtgtgggctagaggtattgatgtacagcaggtctcattggtaattaactatgat
ctccccaacaatcgtgaattgtacatacatagaattggtcgttctggacggtacggtcgt
aaaggtgttgcaatcaattttgtaaagagcgatgacatccgtatcctgagagatattgaa
cagtattacagtacacagattgatgaaatgcccatgaatgttgctgatttgatctaa
DBGET
integrated database retrieval system
