Ptychodera flava: 139149448
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Entry
139149448 CDS
T10724
Name
(RefSeq) LOW QUALITY PROTEIN: polyribonucleotide nucleotidyltransferase 1, mitochondrial-like
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
139149448
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139149448
03016 Transfer RNA biogenesis [BR:
pfll03016
]
139149448
Enzymes [BR:
pfll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
139149448
Messenger RNA biogenesis [BR:
pfll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
139149448
Transfer RNA biogenesis [BR:
pfll03016
]
Prokaryotic type
tRNA degradation factors
139149448
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
KH-I_KHDC4-BBP
S1
Phage_Gp84
Motif
Other DBs
NCBI-GeneID:
139149448
NCBI-ProteinID:
XP_070577323
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All DBs
Position
14:complement(13854320..13874581)
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AA seq
781 aa
AA seq
DB search
MAARIGSLRNSFLLQNKRYTRTCVLLYEFEHKHMLKFRRWNHFNPWKNAESAGDVDIQIG
TRPLKIFTGKLARFADGCAVAKVGETSVMVTAVSRTKPSSSASFLPLTVDYRQKAAAAGR
IPMNHLRRDRGPTDVEILTSRMIDRSIRPLFPSGYFYDTQIICNSLALDGANEPDILSIN
AASAALALSDIPWNGPIGAVRVGHVDGEFVINPTRLELSRSLLNLVVAGSRKSNVVMLEA
SAENILQNDFCKAIKLGVKEVQQIILGIDKLCKTHAKDKREFETSASVSEELLDSLKEMA
RDRLYEVFSDPSHHKFSRDNAVTEIRTECLEKLAEKFPDTESFLLTEAFTXVVKETFRGI
ILDEYRRCDGRSLTDLRDISCDVDLYQPLHGSALFQRGQTQVLCTVTFDSIESALKSDSV
TDSGNQRQNFMLHYEFPPYATNETGRMFSSRRELGHGALAEKSLRPVIPSGFPFTIRLTS
EVLESNGSSSMASACGGSLALMDAGVPISSAVAGVAIGLVTKTDPDNPTDIKDYRLMSDL
LGIEDYYGDMDFKMAGTKKGITALQADIKLPGLPLKVVMEAIQQATSAKNEILNIMGKTI
RKPRSTRKENGPVCETLEVPVSRRARFVGPGGYNIRKIRAETGVSITQIDETNFSVFAPT
PSAMNEAKEQMEELLKDDREMELEFGAVYTATITEIRDSGVMVKLYPNMTPTLLHNTQLD
VRRVNHPSVLGLEVGQEMSVKYYGRDPVSGKMRLSRKVLMAPASAVVRTLGDKPTATFKP
T
NT seq
2346 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgcgcattggaagtttgcgaaactcgtttttacttcaaaacaagcggtacaca
agaacttgcgttcttctttacgagtttgagcacaagcatatgttgaagtttcggcgatgg
aaccattttaacccgtggaaaaatgccgaaagcgctggagatgtcgatatacagatcggt
acacgaccactcaagatatttacaggtaaactggcaagatttgctgatggatgtgctgta
gcaaaggtgggagaaacatcagtgatggtgactgcagtcagcagaaccaaaccttcctca
tcagcatcattcttgccattgacagttgattaccgtcagaaagctgctgcagccggtcgg
atacccatgaatcatttgaggagagatcgtggtccgacagatgttgaaattcttacaagt
agaatgattgacagatcaatacgacctttgttcccatctggatatttttatgacactcag
ataatctgcaactccctagcattagatggtgcaaatgaacccgatatactgagtattaat
gcagcttcagcagcccttgctttgtctgatattccatggaatggtccgattggtgctgtc
agagttggccatgtcgatggagagtttgtaataaatccaactcgacttgaactgagcaga
agtctactcaatttggtcgtcgctggttccaggaaaagtaatgttgtcatgcttgaagca
tcagcagaaaatattctgcagaatgatttttgcaaagccattaaactgggagtcaaagag
gtccagcagattatacttggcatagacaaactttgtaaaacccatgccaaggacaagaga
gagtttgagactagtgctagtgtctcggaggaacttttagattctttgaaagaaatggct
agagatagactttatgaagtgttttcagacccttcccaccacaagttttcaagagataat
gctgtcactgaaataagaactgaatgtctggagaaactagcagaaaagtttccagacact
gagtctttcctgctgacagaagcatttacancagttgtgaaagaaactttccgagggatt
atattggatgaatataggaggtgtgatggtcgcagtcttaccgacctacgagatatcagt
tgtgatgtggatctgtatcaacctcttcatggctctgctttgtttcaaagaggtcaaaca
caggtgttgtgtacagtaacatttgattccatagaatcagctctaaagtcagactctgtg
acagattccggcaatcaaagacaaaacttcatgctgcattatgagtttccaccctatgca
accaatgaaacagggagaatgttttcaagtaggagagagctgggacatggtgctctagct
gaaaagtctctgagaccagtcattcccagtggtttcccatttacaattagactgacatct
gaagtactagaatccaatggttcatcatccatggcatcagcttgtggaggaagtttggca
ctcatggatgcaggtgttccgatatcatcagcagtagctggtgtggccattggtcttgtc
acaaagacagatcccgacaatccaacagatatcaaagattacagattgatgtctgatctt
ctgggtatagaagattactatggtgacatggatttcaagatggcagggacaaagaagggg
attacagcattgcaggctgatatcaaacttcctggcttacctctcaaagttgtcatggaa
gccatacagcaagccacatcggcaaagaatgaaatccttaacatcatgggaaaaacaatc
cgtaagccgaggagtacgcgcaaggaaaatggacctgtatgtgaaaccttagaagtacct
gtatcaaggcgagctcgatttgttggaccaggagggtataatatcagaaaaatcagagca
gagacaggtgtcagtattactcagattgatgagacaaacttttccgtcttcgctcccaca
ccaagtgcaatgaatgaagccaaagaacaaatggaagaactgctgaaagatgatagagaa
atggagttagaatttggagctgtgtacactgcaacaattacggaaattagagattctggt
gtaatggtgaagttgtatccaaacatgactcctacgttactccataacacacagcttgat
gtcaggagggtaaaccatcccagtgttctagggcttgaagtaggccaagaaatgtccgtc
aagtactatggtcgtgatccagtcagtggcaaaatgcgactgtcacgtaaagtcctcatg
gccccagcatcagcagttgtcaggaccttaggtgacaagccgacggctactttcaagcca
acgtga
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