KEGG   Ptychodera flava: 139149967
Entry
139149967         CDS       T10724                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
pfll  Ptychodera flava
Pathway
pfll03020  RNA polymerase
pfll03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:pfll00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    139149967
  09124 Replication and repair
   03420 Nucleotide excision repair
    139149967
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pfll03021]
    139149967
   03019 Messenger RNA biogenesis [BR:pfll03019]
    139149967
   03400 DNA repair and recombination proteins [BR:pfll03400]
    139149967
Transcription machinery [BR:pfll03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     139149967
Messenger RNA biogenesis [BR:pfll03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     139149967
DNA repair and recombination proteins [BR:pfll03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      139149967
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 139149967
NCBI-ProteinID: XP_070578162
LinkDB
Position
14:27170946..27180746
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLNTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGMIQ
PSRGFVKYPVKYKAIVFRPFKGEVVDAVVTQVNKVGLFTEIGPLSCFVSRHSIPSDMEFD
PNSNPPCYKTQDEDVVIQQDDEIRLKIVGTRVDATDIFAIGSLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcacatatcccttgaacatgaaattttacttcatccaagatattttggtcca
aatctactcaacactgtcaagcaaaaactattcacagaagtagaaggaacttgcacaggg
aagtatggatttgtgatagcagtgacaacgatagataacataggagccggaatgatccag
ccaagcagaggatttgtcaaatatccagtcaaatacaaggctattgttttcagaccattc
aaaggagaagtggttgatgctgtagtcactcaggttaacaaggtcggacttttcacagag
ataggacctctttcctgctttgtctccagacattccattccatcagatatggagttcgat
cccaactccaatcctccctgctacaagactcaagacgaggatgttgtcattcaacaggat
gatgaaatcaggttaaagattgtaggaacacgagtagatgccacagatatttttgctatt
ggatctcttatggatgattacttgggtcttgtcagctga

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