Ptychodera flava: 139150439
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Entry
139150439 CDS
T10724
Name
(RefSeq) pre-mRNA-processing factor 39-like
KO
K13217
pre-mRNA-processing factor 39
Organism
pfll Ptychodera flava
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfll03041
]
139150439
Spliceosome [BR:
pfll03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
Other SAPs
139150439
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_PRP39_N
HAT_PRP39_C
Suf
HAT_Syf1_CNRKL1_N
TPR_14
HAT_Syf1_CNRKL1_C
Linker_histone
DUF1999
Motif
Other DBs
NCBI-GeneID:
139150439
NCBI-ProteinID:
XP_070578914
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All DBs
Position
14:complement(39174949..39189120)
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AA seq
680 aa
AA seq
DB search
MEDEEISIHTEQIDPELDQEATAVEEIATPVETVEEMEQETSKETESTGDLQKPESPQEE
EKAEIATEEVEKTPSPVKEKEDPPPKELAKYWKVVKDNTSDFTGWTYLLQYVEQENHLKS
AREAFDGFFNRYPYCYGYWKKYADFEKRSGNLSKACEVFERGTRATALSIDLWINYINFY
SDNFGHAPDAKEKIRSLFEKAIAAAGTEFRSDKLWDMYITWEKEQKSLKNVTALYDRLLA
IPTQLYSHHFDQFKEHINSNLPKDVLTIDEFLQIRSEIVASNESVEPDSTIDDAPPGVEA
PPGEEEPTSSTNKSDPENIAIREKVIEVRKEVFRQTEEEVSKRWAFEEGVKRPYFHVKPL
ERAQLKNWREYLDFEIENGSHERVVVLFERCMIATALYEDFWLKYAKYLEPHSKEGVSAV
FRRACEIHLPKKPNIHLQWAAYEEQQGNIDEVRRILKNLSGALPDLAMVTLRRISVERRQ
NNNDAVHDLLTECIKSAKNKAVSSFYSIKQARYHAKIQNDVEKAKEVLNKAIEKDKSNGK
LYLQLLDLEFQGATPNEDAVVSIFDRVLNSKDTSQDTKVVFSQRKLEFLEDFGSDITKIL
NTYEEHQKLYKQHNNKKRSHGEGDESSHKKAKSNGSTMDSTNTSSSYNYSAPGWSGYNSS
SAYNYQQPSWNTYGQGYYPS
NT seq
2043 nt
NT seq
+upstream
nt +downstream
nt
atggaggacgaggaaataagtatccacacggaacaaatagatccagaattggatcaagaa
gcaacagctgtagaagaaatagcaacgccagttgaaactgttgaggaaatggaacaagaa
accagtaaagagactgaaagtactggtgatttgcaaaaaccagaaagtcctcaagaagaa
gaaaaagctgaaattgcaacggaagaagtggagaagacaccttcaccagtcaaagagaaa
gaggatccacccccaaaagagttagcaaagtactggaaagttgtgaaggataatacttca
gattttactggctggacttatctcctgcagtatgtagaacaagagaatcatttgaaatct
gccagagaagcctttgatggtttcttcaatagatatccgtattgctatggctattggaag
aagtatgctgattttgaaaaaagatctggtaacttatctaaagcctgtgaagtctttgaa
agaggaacgagggccactgctcttagcattgatctgtggattaactacataaatttctat
tctgacaactttggacatgcaccagatgcaaaggaaaagatcagaagtttatttgaaaaa
gctatcgctgcagctggtacagagttcagatcagacaaactctgggatatgtatattaca
tgggagaaagagcagaaaagtctgaagaatgtgactgccctctacgacagacttttagcc
attcccacccaactctatagtcatcattttgaccagttcaaggaacatatcaattcaaat
cttccaaaagatgtgttaactattgatgaattcctacaaatcagatctgaaattgtggcc
agcaatgagagcgttgaaccagacagcacgatagatgatgctccaccaggtgttgaagcg
ccccctggtgaggaagaaccaacatccagtacaaacaagagtgatcctgaaaatattgcc
atacgagaaaaggtgattgaagtgaggaaagaagttttcagacaaacagaagaagaagtc
agcaagagatgggcttttgaagaaggagtgaaaaggccatacttccatgtgaagccattg
gagagggctcagctgaagaactggagagaatatttagattttgaaattgaaaatggcagc
catgaaagagttgttgttctctttgagcgttgtatgattgcaactgcattgtatgaagat
ttttggttgaagtatgcaaagtatctggaaccacacagtaaggagggagtgagtgcagtt
ttcagaagagcctgtgagattcaccttccaaagaaacctaacattcacttacagtgggca
gcatatgaagaacaacaaggtaatattgacgaagtcagacggatactgaagaacctgagt
ggagcattaccagaccttgcaatggtaacactgagaaggattagtgtagaaagaagacag
aacaacaatgatgccgtacacgatttgctgacagaatgcattaaaagtgccaaaaacaaa
gcagtgagttccttctacagcataaagcaagcaagatatcatgccaagattcagaacgat
gtagagaaagccaaggaagtactcaacaaagcaatagagaaagacaagagtaatggtaaa
ttgtacttgcaattgcttgatttggaattccaaggagccacaccaaatgaagacgctgtt
gtgtctatatttgatagagtactaaacagtaaggatacatctcaggacaccaaagttgtc
ttctcacaaagaaagttagagtttcttgaagactttgggtcagatatcacaaagattcta
aatacatatgaggaacatcagaagttatacaagcaacacaacaacaagaaaaggtcacat
ggagaaggtgatgagagcagtcacaagaaagccaagtctaatggaagtactatggactct
acaaacacatcatcatcctacaactactctgcacctggctggtcaggatataattcatct
agtgcatacaattaccaacaacctagctggaatacatacggccaaggctactatccttca
tga
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