Ptychodera flava: 139150872
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Entry
139150872 CDS
T10724
Name
(RefSeq) mismatch repair endonuclease PMS2-like isoform X1
KO
K10858
DNA mismatch repair protein PMS2
Organism
pfll Ptychodera flava
Pathway
pfll03430
Mismatch repair
pfll03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
139150872
03460 Fanconi anemia pathway
139150872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pfll03400
]
139150872
DNA repair and recombination proteins [BR:
pfll03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
139150872
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_mis_repair
MutL_C
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
139150872
NCBI-ProteinID:
XP_070579402
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Position
15:2945963..2973904
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AA seq
938 aa
AA seq
DB search
MAERGEQLEQGEHRLHEDSSELLDDVDIGPQLECGGPPTNMKAGHVQAIDKQSVHQICSG
QVVLNLATAVKELVENSLDAGATNIDIRLKEHGSEFLEVADNGSGVEPRDFEGLALKHHT
SKLRDFSDLTSVGTFGFRGEALSSLCALCDLSVITCHKSSSIGTRLEYDHNGKISKKEAC
PRQQGTSVNLHQIFYTLPVRHKEFLRNLKKEYTKMVNVLYAYCIISTGVRIQCTNQNGKG
KKVAVVSTNGNSTMKENITNIFGPKQIQSLLDFEQHVPSEQVCEDYGLKADKVNAVFRIS
GLVSKPDHGLGRSSTDRQFYFINNRPCDYSKVSKVVNEVYHMYNRHQYPFVVMDISLAKE
GVDVNVTPDKRQILLQEEKTLLAIIKTSLMKMYEPRSSVYAINQKPSALVKSASLSAMFG
RGQSNSSSSNGSPNKRTKVEPAIQTLTLSRLKRAFSHPGSTTNLEEVDSYRKPAKQPRLD
SFVFRSPHSSSSQQMTQCQDADSEGYGTSSISSNSQDISQGSSTDLDIVQNSPSCADCSS
SLSSQSRMVENQESSTQAMLNRPFLKLTNQSHPSRQSTNQSEPSSQLTNKRDQTDESTNP
QCILSEISNINNSNNTDILTETAEHTAMIQNTHDQDTELKDRTEEDRTEFNVYCEDVKVK
KTLPNINSLPCKTYRKASSSSRKIDKEVEIQRKEVTIPFCLTNLQKKLKRVAETKSESEV
EARSFRAKISPGDNATAEEELQREISKDMFSKMEILGQFNLGFIIAKLKQDLFIIDQHAT
DEKYNFEMLQKHTTLQSQRLIQAKNLELTSVNECVLMDNIEIFRKNGFDFLIDEEAEPTQ
RVKLLSLPMSKNWTFGKEDIDELIFMLSDAPGVTCRPSRVRQMFASRSCRKSVMIGTALN
KAEMSKLVYHMGEIEQPWNCPHGRPTMRHLFNLNMLPD
NT seq
2817 nt
NT seq
+upstream
nt +downstream
nt
atggctgaacgtggggagcaactcgagcaaggcgagcatcgtctacatgaagacagctct
gagttgcttgacgatgtcgatataggtccacagttagagtgtggaggaccaccaacaaac
atgaaagcaggacatgtacaagccatcgacaaacagtctgtgcatcaaatatgttctgga
caagttgtcctgaacctggccacagctgtgaaagaacttgtggagaatagtctagatgca
ggtgccacaaatattgacatcagattaaaagaacatggttctgaattcttggaagtggct
gacaatggaagtggtgttgaaccaagagattttgaaggattggctctgaagcaccacact
tccaaactgcgtgatttctctgatctgacgagtgttggcacattcggtttccgaggagaa
gctctgagttcgttgtgtgctttatgtgatctgagtgtaatcacatgccacaaatcaagc
agcattggaacaagacttgaatatgatcacaatggaaagatcagcaagaaagaggcatgc
cctagacagcaaggaacaagcgttaacttacatcagatattttacacactgccagttaga
cacaaagaattcctcagaaacttgaaaaaggagtacacaaagatggtaaatgtcttgtat
gcgtactgtatcatttcaactggagtcagaatacagtgtacaaatcaaaatggcaaaggg
aaaaaagtagctgttgtctctaccaatggcaattccacaatgaaggaaaatatcacaaac
atattcggtccaaaacaaatacaaagcctccttgactttgaacagcacgtaccaagtgag
caagtatgtgaggactatgggctaaaagctgacaaagttaatgctgtgttcaggatatca
ggacttgtgtcaaaaccagaccatggacttggcagaagcagtacagacaggcagttttat
ttcatcaataatagaccatgtgactacagcaaggtctccaaagtggtcaatgaagtctat
cacatgtacaacagacatcagtatccttttgttgtcatggatatctcattggcaaaagag
ggcgttgatgttaatgtcacaccagacaaaagacaaattttactccaagaagagaagaca
ctcctggcaataatcaagacttctttgatgaagatgtatgaaccaagatcatcagtgtat
gccataaaccagaagccttcagcgttggtgaaatctgcatctttgtctgcaatgtttggt
agagggcagtctaacagcagtagtagtaatggatcacccaataagaggacaaaagttgaa
ccagcaattcagacactaactctgtccaggttgaaaagggcattttcacaccctggtagc
acaactaaccttgaagaggtggactcatacagaaaaccagcaaaacagccaagacttgat
agttttgtcttcaggtcaccgcacagtagcagcagtcagcagatgacacagtgtcaagac
gctgatagtgaaggatatgggacttcaagcatctcaagtaatagtcaagacatttcccag
ggatcttcaactgatcttgacattgtacagaacagtccaagctgtgcagattgttcttct
tctctgtccagtcagtcaagaatggtagagaatcaggaatcaagcacccaagccatgttg
aacaggccattcttgaagttaaccaatcagagtcatccttcccgtcagtcaaccaatcag
agtgaaccttcaagtcagttgaccaataagagagatcagactgatgaatcaaccaatcca
caatgcatactgagtgagattagtaatatcaacaacagtaacaatacagacattctgaca
gaaactgctgaacacactgccatgatacaaaatacccatgatcaagacacagagcttaaa
gacaggacagaagaggacaggacagagttcaacgtttactgtgaagatgttaaagtgaag
aaaacactgccaaatataaattctttaccctgcaaaacttacagaaaggcttcaagttca
agtaggaaaatagataaagaggttgagatacaaagaaaagaagtaaccattccattctgc
ttgacaaacttacagaaaaaactcaagagagttgcagagaccaaatctgaatctgaagtg
gaggccaggtcattccgtgcaaaaatctcacctggtgacaatgctacagctgaagaagaa
ctccagagggaaatcagtaaagatatgttcagcaagatggagatacttggtcagtttaat
cttggtttcatcattgccaaacttaaacaggacttgttcatcattgatcagcatgcaaca
gatgagaagtacaactttgaaatgttacagaaacacacaacattacaaagtcaaagactg
attcaggcaaaaaatcttgaactgacgtctgtgaatgaatgtgtgttgatggacaatatt
gaaatattcagaaagaatggttttgattttctaatcgatgaggaagctgaaccaactcag
agggtaaaactgttgtcactgccgatgagtaaaaactggacatttggtaaagaagacatt
gatgaactcatcttcatgttgagcgatgctcctggtgtaacatgtaggccatcaagagtt
cggcagatgtttgcatctagatcatgtaggaaatctgtcatgattggcacagctttgaat
aaagccgagatgagcaagcttgtctatcacatgggagaaattgaacaaccatggaattgt
ccacatggtagaccaacgatgcgtcatctcttcaacttaaacatgttacctgattaa
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