Ptychodera flava: 139151427
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Entry
139151427 CDS
T10724
Name
(RefSeq) CCR4-NOT transcription complex subunit 3-like isoform X1
KO
K12580
CCR4-NOT transcription complex subunit 3
Organism
pfll Ptychodera flava
Pathway
pfll03018
RNA degradation
Brite
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
139151427
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
139151427
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GFIT
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NCBI-GeneID:
139151427
NCBI-ProteinID:
XP_070580322
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Position
15:18775175..18806039
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AA seq
789 aa
AA seq
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MADKRKLQGEIDRCLKKVTEGVETFEDIWQKVQHAANSNQKEKYEADLKKEIKKLQRLRD
QIKTWVASNDIKDKRTLLDNRKLIETQMERFKVVERETKTKAYSKEGLGLAAKVDPVQRE
RDETNHWLQESIDKLSMQVDQFESEIETLSTATKKKRPDKDKLERIEELQTWVERHRYHV
KNLETLMRMLDNNNIEVEMIKRIQEDIEYYIKCSQDPDFEENEFIYEDLDLDDNMVQANM
MATSPDDEFILNTSGGTPTSPSGSSPIGSPSVNNHSKEDEDIKKRNKSGDSSSDISSPRK
NSKGNSVTSPDTITPLVVRPTPTRATSVPSSTTNTTTMSNNKSLVTKSNSTPLQSGISNH
TVATPPPGPAYAVAVGAQQNNNSQGTATSAQPRSPQPVPHVQQQQQQQLHHQQQQPPPTP
PSSTPPVPTQQQQQQLQLPPSMSSSNRPLQRTENGIMQGVSYNTPVPENSVVNSIDHTTT
SSASNTHSVPSTPTSTTAIVSSLASSLPPSSSSANLNAAPAPVSLATTGPNMTMSIVGNK
PLVTESLMNGPVSMPTSQLKIQPLQDESERMSTLKSMAEKVVVSAGLEDHLQTSTSTTTF
TTDTTSFFDAKTENHQAQQPQMTEITLQPLLGVAPLGPQPLSKEQCYQLAMLEATSHHLP
HPSDSERLRHYLPRNPCPTPPYHHQVMPPHMDSVEFFQRLSTETLFFIFYYLEVSHGTKA
QYLAAKALKKQSWRFHTKYMMWFQRHEEPKTITDEYEQGTYIYFDYEKWGQRKKEGFTFE
YRYLEDRDL
NT seq
2370 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaaaggaaacttcaaggtgaaattgacaggtgcttgaagaaagtaactgaa
ggagtggagacgtttgaagacatttggcagaaggtacaacatgctgccaacagcaaccaa
aaagaaaaatatgaagcagatctcaagaaagaaattaaaaagcttcagagacttcgagat
caaatcaagacatgggttgcgtcaaatgacatcaaagacaagagaacacttctcgacaac
cgaaaacttatagaaacgcaaatggaaaggttcaaagtggtagagagggaaaccaagacc
aaagcatattccaaggagggcctgggactagcagccaaagttgacccggtgcagagggaa
agggacgaaacgaatcactggttacaagagtcaatcgacaaactaagcatgcaggtcgac
cagtttgagagcgaaatagaaacactttcaacggcgacaaaaaagaaaaggccagataaa
gacaaactggaaagaatagaagagctacagacgtgggttgaaaggcatagatatcacgtg
aaaaacttagaaacactgatgagaatgctagacaacaataacatagaagtagaaatgatt
aagagaatccaggaagacatagagtattacatcaaatgctcacaggatccggactttgaa
gaaaacgagtttatctatgaagacctagatcttgatgataacatggttcaggcaaacatg
atggcaacatcgccggacgacgagttcatcttgaacacgtcgggaggaacgccgacgtcg
cccagcggcagttcgccgataggtagcccaagtgtaaataatcattccaaagaagacgag
gacatcaagaaaagaaataagtctggcgattcgtcatcagatatttcgtcaccaaggaag
aactcgaaggggaactcagtaacatcgcctgacaccatcacgccactagtcgtccgtccc
acaccgacgcgggcaacatcggtgccgtcatcgacgacgaacacaacgacgatgagtaat
aacaagagtttagtcaccaagtcaaacagtacgccactgcaatcaggaataagcaatcac
accgtagcaacacctccgccagggccagcgtatgcagtagcagtaggagcacaacagaac
aataactcacaaggtacagcaacgtcagcacagcctaggtctccacagccagtaccgcat
gtgcaacaacaacaacaacaacaacttcatcatcaacaacaacaaccaccaccaacacca
ccatcatctacccctccagtacccacacaacaacaacaacaacaactacagctgccaccc
tccatgagtagtagtaacagaccgctacagagaaccgagaatggaataatgcaaggtgta
agttacaatacgccagtgccagagaactctgtagtgaactccatagatcacacgaccacc
agtagtgcaagtaatacccactcagtaccttcgacgcccacgagcaccactgccattgtc
tcgagtttggcatcgtcgctaccgccttcatcgtcgtcagccaacctcaatgcagcgccg
gcgccggtgtcgctggccacaaccgggccaaacatgacaatgtcaatagtagggaacaag
ccgttagtgacagagagtcttatgaacggtccagttagtatgccaacgtcacaactgaag
atccagccgcttcaggacgagtcggagagaatgtcaacactcaagagcatggcagagaaa
gtagtcgtcagtgcggggttagaagaccatctccaaacaagcacgtcaaccaccacattt
accacagacacaacatcgttttttgatgcaaagacagaaaaccatcaagcgcaacagcca
cagatgactgaaataacgttacagcctttactgggagttgcaccactgggaccacagcct
ttgtccaaagaacagtgctatcagctagctatgctagaagccacgtcccaccacctaccg
catccttcagactcagaaagacttaggcactacctgcccagaaatccctgcccaacacca
ccttatcaccatcaagtcatgccaccccacatggattccgtggagttcttccaaagactc
tcaacagagacacttttctttatcttttattatcttgaggtaagtcatgggacgaaagct
cagtatttagcagctaaggcactaaagaagcaatcatggagattccataccaaatacatg
atgtggtttcagaggcatgaagagccaaagacaataactgacgagtacgaacagggcaca
tacatctattttgactatgagaagtggggacagaggaagaaagaaggtttcacatttgaa
taccggtaccttgaagacagagacctataa
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