Ptychodera flava: 139151480
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Entry
139151480 CDS
T10724
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp31-like
KO
K12844
U4/U6 small nuclear ribonucleoprotein PRP31
Organism
pfll Ptychodera flava
Pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139151480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfll03041
]
139151480
Spliceosome [BR:
pfll03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139151480
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Nop
Prp31_C
Motif
Other DBs
NCBI-GeneID:
139151480
NCBI-ProteinID:
XP_070580403
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Position
15:20305445..20320813
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AA seq
492 aa
AA seq
DB search
MSLADELLADLEEIAEERDDTELGNEQDDDIEEVEDVTMEVDSSRGDTIKDIATLRDSQR
LKDVRQQILHFQDKRTKDEVNGPVEADPEYQLIIEANNLTVEIDNEINIIHKFCRDHYMK
RFPELESLVPGSLDYMLTVKELGNELEKAKTNEKLQEILTPAVIMVVSVSASTTQGEKMD
SDELSRVYEACDMAVDINEAKSEILKYVESRMSFIAPNLSIIVGASTAAKIMGAAGGLTS
LSKMPACNVQVLGAQRRTLSGFSSAATNPHTGYVFYSDIVQATPPDLRKKATRLVAAKCT
LAARVDSFHESPLGEVGRNLRDEIERKLDKLQEPPPVKQAKPLPAPIEQSRKKRGGRRLR
KMKEKYGMTEMRKAANRMTFGEIEEDAYQDAVGYSAGQIGKAGTGRIRGPQVDNKTQVKI
SKSLQRVLQKQQTYGGKSTVKGRETSGTASSVAFTPLQGLEIVNPNAAEKKVAEANAKYF
SATASFLHVKDK
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgtctctcgcagatgaacttttagcagacttggaggagatagctgaggagagagatgat
acagaacttggcaacgaacaagatgacgatattgaggaagttgaagatgttaccatggaa
gttgactccagtaggggtgacaccataaaggatatagcaactcttcgagacagtcagcgg
ttaaaagatgttcgtcaacaaattttacatttccaagacaaaaggacaaaagatgaagtg
aatggtcccgtagaagcagatcctgagtaccaactgattattgaagccaacaatttgaca
gtagaaatcgacaatgaaatcaatatcattcacaaattctgcagagaccactacatgaaa
agattcccagagttagaatcattggtgccaggttccttggactacatgttgacagtcaag
gaacttggtaatgaattagagaaagcaaagacgaatgaaaaactacaagaaatcttgacc
cctgccgtgatcatggttgttagtgtgtctgcgtcgacaacccagggtgaaaaaatggac
agtgatgaactgagtcgtgtttatgaggcttgtgatatggctgtcgatatcaatgaagca
aagtcggagatcttaaagtatgtggaatccagaatgtcgttcatcgcaccaaatttgtca
atcattgtcggtgcgtcaacagctgctaaaattatgggtgctgctggaggattgacaagt
ttatccaagatgccggcttgcaatgtccaagtgttgggagctcagcggagaacactgagt
gggttttcatcagcggcgaccaatccacacactggatatgtcttttacagtgacatagta
caggctactcctccagatttgaggaagaaagccactcgtcttgtagcagctaagtgcacc
ttagcggcgcgtgtggacagcttccacgagagtcctctgggagaggttggacggaacctc
cgggatgaaatcgagaggaagttggataaacttcaggagccaccgccagtgaaacaagcc
aagccactgccagcacctattgaacagtcaaggaagaagagagggggacgcagattaaga
aaaatgaaagaaaaatacggtatgacagaaatgagaaaggcggccaacaggatgaccttt
ggagaaattgaggaagacgcctatcaggatgcagtggggtattctgctggtcagattgga
aaagcaggaactggtagaattcgaggacctcaagtggacaataaaacacaagtcaaaatt
tccaagagtttacagagagtacttcaaaagcagcagacatatggtggaaaatctacagtc
aaaggtcgtgaaacctcaggtacagcatccagtgtggcgtttactccacttcagggattg
gaaattgtcaacccaaacgcagcagagaaaaaggtcgccgaagccaatgccaaatatttc
tcagctactgccagctttcttcatgtcaaggacaaatga
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