Ptychodera flava: 139151597
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Entry
139151597 CDS
T10724
Name
(RefSeq) RNA-binding protein with serine-rich domain 1-like
KO
K14325
RNA-binding protein with serine-rich domain 1
Organism
pfll Ptychodera flava
Pathway
pfll03013
Nucleocytoplasmic transport
pfll03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
139151597
03015 mRNA surveillance pathway
139151597
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pfll03019
]
139151597
Messenger RNA biogenesis [BR:
pfll03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
139151597
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_5
RRM_3
LPD16
Motif
Other DBs
NCBI-GeneID:
139151597
NCBI-ProteinID:
XP_070580605
LinkDB
All DBs
Position
15:complement(23683050..23689494)
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AA seq
274 aa
AA seq
DB search
MVRSRSRSADRKASKSKGGDKKSKDRGRDRKRRASSSSSSGSDSSRSSSSSSRSRSSSSG
SSSSSGSSTSRSRSRSSSSGSSSRSSSSRSSSGSSTSRSRSRSRARKRSAKASRSKSRSR
SPRKKKRSPTPKPTKLHIGRLTRNVNRDHLTEIFAVYGKVKSVELPVDRFNTHISRGFAY
VDFETHDEAEKAMKHMDGGQIDGQEITAAMVLAPRPRQPAPRRSPPRRAPPWRRSPPRFR
RRSPPRRRSPPRRRSRSRSPRRRRYSRSSSSSSR
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atggttcgcagcaggagcaggagtgctgacaggaaagctagcaaaagcaaaggtggggac
aaaaagtccaaagacagaggcagagaccggaaaagacgggcatccagcagtagcagcagt
gggagtgacagcagccgttcctcctcaagctcctccaggagtagatcaagctcctctggc
tcatccagcagttctggaagcagcacttccaggtcaaggtccagaagcagttcctcaggt
tcaagctcaaggagttcatcatcacgcagcagcagcggaagctcaacttcgcggagcaga
agtagaagccgtgctaggaaaaggagtgctaaagcttcaagatcaaagtcaagatcaaga
tcaccaaggaagaagaaaagaagccccacaccaaaaccaacaaagctccacattgggcgt
cttactcgcaatgtcaacagagatcacctcacggaaatatttgccgtctatggaaaggtg
aagtcagtagaactgccagttgataggtttaatacacacatatcaagaggatttgcttat
gtcgattttgaaacccatgacgaggccgagaaagccatgaaacatatggatggaggtcaa
attgatggtcaagaaataacagcagcaatggtgttggcacccaggccaagacaaccagca
ccaaggcgcagtccgccacgacgtgcaccaccatggagaagatcaccacccagattcaga
agaaggtcaccaccacgaagaagatcacctccacgaagaagatcgcgatcaaggtcaccc
agaaggcgtagatacagcagatctagttcaagttcatcacgatga
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