Ptychodera flava: 139152774
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Entry
139152774 CDS
T10724
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4-like
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
pfll Ptychodera flava
Pathway
pfll03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pfll00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
139152774
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pfll03041
]
139152774
Spliceosome [BR:
pfll03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
139152774
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_WDHD1_1st
WD40_CDC20-Fz
EIF3I
Beta-prop_EML_2
WDR55
Beta-prop_TEP1_2nd
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
ANAPC4_WD40
PRP4
Beta-prop_EML
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
WDR90_beta-prop_4th
Beta-prop_TEP1_C
Beta-prop_SPT8
Ge1_WD40
Beta-prop_Vps41
Beta-prop_SCAP
Beta-prop_RIG_2nd
Beta-prop_IFT122_1st
Beta-prop_IFT140_1st
Beta-prop_WDR19_1st
WD40_like
WD_LRWD1
WD40_RFWD3
Beta-prop_Nup120_160
Nbas_N
Motif
Other DBs
NCBI-GeneID:
139152774
NCBI-ProteinID:
XP_070582205
LinkDB
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Position
16:complement(9971775..9995379)
Genome browser
AA seq
498 aa
AA seq
DB search
MSDDEDIRYIKRQKVHYGSLESQVKSSTEESIKAGIQSGNINIFEGDHFDLEEHVNAQRE
EMLAEFERRKRARQILVSTDDSEVKVKLRELGEPICLFGEGPADRRERLRQLLASLGEEH
FAKEKKEDPVKAEEKKYEQKTWYHQGPQGLKKARYWLAEYSLPRAETRLEAARKYKQIPE
SQKNAKRQELHRFLRSISNQCSQIGDTRPISSCQISPDGKILATSSWSGLCKLWSVPDCE
PIRTLRGHNHNVGNIVFHPEATLSLEGSACCLASCAADGSVKLWSLESDEPVADIEGHGN
RVSQIAYHPSGRFLGTTCHDCSWRLWDLEAQDEILHQEGHSKAVYCLAFQCDGSLVTTGG
LDSFGRVWDLRSGRCIMFMEGHLKGILSVDFSPNGYHIASGSEDNTVKIWDVRQRKCVYT
IPAHGSLVSRVKFQKENGNFLVTSSYDNTAKVWAHPGWAPLITLAGHEGKVMGVDISPNN
QYIVTSSWDRTFKLWAAE
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgtcagatgacgaagatatcaggtacatcaaaagacagaaggtacattatggaagtctt
gaaagccaagttaaaagcagtacagaagaaagtattaaagctggcatacagtcgggtaac
attaacatctttgaaggagatcactttgaccttgaagaacatgtcaacgcacagcgtgaa
gagatgcttgcagaatttgaaaggaggaaacgggccaggcagattcttgtatcaacagat
gacagtgaggtcaaggtgaaactaagggaacttggagaacctatatgtttatttggtgag
ggacccgctgacagaagggagcgactcaggcaacttcttgcaagtctcggtgaagaacat
tttgcaaaggagaaaaaagaagaccctgtgaaagctgaagagaaaaagtatgaacaaaaa
acctggtatcatcagggacctcaaggcctgaaaaaggccaggtattggttggcagagtac
tcgttaccaagagctgagacaaggcttgaagcagcaaggaaatataaacaaataccagaa
tcacagaagaatgcaaaaagacaagaacttcacagatttcttaggtccatcagtaatcag
tgcagtcagattggagacacaagaccaatcagcagttgtcagatcagtcccgatggcaaa
atactggcgacatcgtcatggagtggtctatgcaagctgtggtcagttccagactgtgaa
ccaataaggactctgagaggtcataatcacaatgttggcaatatagttttccatcctgaa
gctactctaagccttgaagggtctgcatgttgccttgcttcctgtgctgccgatggttct
gtcaagttatggtccttagaaagtgatgaacctgtcgcagacattgagggacatggcaac
agagtgtcacaaatagcttaccatccgtcagggagatttctaggaactacttgtcatgat
tgttcatggagactttgggacttggaagcacaagatgaaatcttgcatcaagaaggtcac
agtaaagctgtttactgtcttgcattccagtgtgatggttctcttgtcacaacaggcggt
ttagattcttttggaagagtgtgggatctgagaagtggccgatgtatcatgtttatggaa
ggtcatcttaaaggaattctatcagtggatttttcaccaaatggataccacatagccagt
ggtagtgaagacaatacagtgaaaatctgggatgtcagacagaggaagtgtgtctataca
atacctgcacacggtagcttggtatccagagtcaaatttcaaaaggagaatggcaatttt
cttgtgacaagttcatatgacaacacagccaaagtttgggcacatccaggttgggcacca
ttgatcacattggctggccatgaaggcaaggttatgggagtggatatttcaccaaacaat
cagtatatcgtcacgtcttcatgggacagaacattcaaactctgggctgcagagtag
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integrated database retrieval system
