Pampinifervens florentissimum: G3M65_02325
Help
Entry
G3M65_02325 CDS
T11282
Name
(GenBank) RNA polymerase sigma factor RpoD/SigA
KO
K03086
RNA polymerase primary sigma factor
Organism
pflo Pampinifervens florentissimum
Pathway
pflo02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
pflo00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
G3M65_02325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflo03021
]
G3M65_02325
Transcription machinery [BR:
pflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
G3M65_02325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r3
Sigma70_r2
Sigma70_r1_2
Sigma70_r4_2
HNH_repeat
JHD
Nif11
ATP-cone
Motif
Other DBs
NCBI-ProteinID:
QID34179
LinkDB
All DBs
Position
405887..406819
Genome browser
AA seq
310 aa
AA seq
DB search
MIPDTEQEIINQYLKKVSKIPLLTPEEEKEIARKAKEGDQQAFRRLVESNLRFVISIAKQ
YLGYGLPLSELIAAGNHGLIEAAKRFDPDRGVKFISYAVWWIRQAIMQALSQQTGAVRIP
IKQSHLINRISSLYSRLYRELEREPTSEEIAYEYTKEVLQKELEKELGREPTEEEIEKRI
KKEGYKISPEEVDKCLQLCRVPLSLDAPVGENEDTFFVDFLSQHGTADVEERIISEVLEK
EIDDLLDKLPEKERRVIELRFGLRGEEPRTLREIGDILQISRERVRQLETRALRKLRNMA
MKRHLKDFLS
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atgataccagacactgagcaagagataataaaccagtatctcaagaaggtttccaagata
ccccttctcacaccagaggaagagaaggaaatcgcaaggaaggcaaaggaaggagaccag
caagccttcagaaggcttgtagagtcaaacctcaggtttgtcataagcatagcaaagcaa
taccttggctatggtcttcctttgtctgaactcatagcggcgggtaatcacgggttaatt
gaagcagcaaagaggtttgacccagacaggggcgtaaagttcatatcctacgcggtatgg
tggataaggcaggctataatgcaggctctttcccaacaaaccggtgcggtcaggattccc
ataaaacagtctcatttaataaaccgaataagcagtctatacagcaggctttacagagag
cttgaaagagagcccacctccgaagagattgcctacgaatacaccaaagaggtgctccaa
aaggagcttgagaaggagctgggacgcgagccaacagaggaggaaatagagaaaaggatt
aaaaaggaaggctacaagattagccccgaggaggtggataaatgtcttcagctttgcaga
gttcccctttctttggatgcaccggttggtgagaacgaggataccttctttgtggacttt
ctcagccagcacggcaccgcagatgtggaggagaggataataagcgaggtgttagagaag
gagatagatgaccttttggacaaacttcctgagaaggaaagaagggttatagagctaagg
tttgggctgaggggcgaagagcctagaactcttagggagataggggacatattgcagatt
tccagagagagggtgcgtcagcttgaaaccagagccctcagaaaactcagaaacatggct
atgaaaagacacctcaaagatttccttagctga
DBGET
integrated database retrieval system
