Pampinifervens florentissimum: G3M65_02330
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Entry
G3M65_02330 CDS
T11282
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pflo Pampinifervens florentissimum
Brite
KEGG Orthology (KO) [BR:
pflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pflo03016
]
G3M65_02330 (truB)
Enzymes [BR:
pflo01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
G3M65_02330 (truB)
Transfer RNA biogenesis [BR:
pflo03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
G3M65_02330 (truB)
Prokaryotic type
G3M65_02330 (truB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
QID32674
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All DBs
Position
406819..407682
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AA seq
287 aa
AA seq
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MLSGLLLVDKPKGLTSMEVVESVKSRFGIKAGHAGTLDPIATGLLLVLVGEATKFSQFFT
GLDKAYTTVAKLGEITDTYDAEGELVESRSVKVSCEDIKEALGRFTGKILQKPPPFSAKR
LGGKRAYQLARRGIKVDIKPVEVHVYRAELLSCNMPFVELFFEVSSGTYIRSLVHELGLE
LSCGAHVVELRRLRVGNFKVDMAVALSRLLSIEDIGGLLIPVGEALSFIPKISLGGELSR
RIKHGSVVRLRENLEKTFVRLYENDHFLGVGLIEGNTLKPYRLMQGL
NT seq
864 nt
NT seq
+upstream
nt +downstream
nt
atgctttctggtcttcttcttgtggataaacccaagggtctcacctccatggaggtggtt
gagtctgtaaaaagtcgttttgggataaaggcagggcatgctggcacccttgaccccata
gctacggggcttctccttgtgcttgtgggcgaagccaccaagttctcccagttttttaca
gggcttgataaagcctacaccacagtggcaaaacttggagagataacagatacctacgac
gcagagggggagttggttgagtcaaggtcggtaaaggtatcttgcgaggatataaaggaa
gcccttggaaggttcacgggcaagatacttcagaaaccaccgcccttctcagcaaaacgt
ctgggtggcaaaagggcataccagctggcaagaagggggataaaggttgatataaagcca
gtggaggttcatgtctacagggcggagcttttgagctgtaatatgccctttgtggagctc
ttctttgaggtctcctctggcacatatataagaagccttgttcatgagctcgggttggag
ctttcctgcggtgcacatgtggtggagctaaggaggttgagggttggtaatttcaaagtg
gacatggcggtagcccttagcagactgctctccatagaggatataggtgggcttttaatc
ccagtgggtgaggcactgagtttcattcccaagataagccttgggggtgagctttcaaga
aggataaaacatggctctgtggtcaggctcagagaaaaccttgaaaaaacctttgttaga
ctctatgaaaatgaccattttcttggtgtaggcttgattgaaggcaataccctcaaaccc
tacaggcttatgcaagggctttga
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