Pampinifervens florentissimum: G3M65_03270
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Entry
G3M65_03270 CDS
T11282
Symbol
dnaB
Name
(GenBank) replicative DNA helicase
KO
K02314
replicative DNA helicase [EC:
5.6.2.3
]
Organism
pflo Pampinifervens florentissimum
Pathway
pflo03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
G3M65_03270 (dnaB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflo03032
]
G3M65_03270 (dnaB)
Enzymes [BR:
pflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
G3M65_03270 (dnaB)
DNA replication proteins [BR:
pflo03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
G3M65_03270 (dnaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DnaB_C
DnaB
AAA_25
ATPase
KdpD
OB_RRP5_4th
Motif
Other DBs
NCBI-ProteinID:
QID32846
LinkDB
All DBs
Position
complement(561847..563250)
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AA seq
467 aa
AA seq
DB search
MIPSDLEPPYDELAERAVLGAIIADPETMPTVLEHLREEDFYFENHKLLFSLLYKVWEDK
GKDWDDIVLKEYIEKRGLKERLDMAFIYSLVEEAATGSLLEEAIRNVKEKSGLRRLMDLS
LNVLRGIREEPDLENLLELLNTKLIEISEKQIVSHYWHIRDVARDVIDIIEKHRKQEKLI
TGRATGFLDLDTLTTGFHPSDLIIVAARPGMGKSSFMLSMAINMAMQEKAPVVIYSLEMS
KEQLVMRALSMLSGVPLQNIRRGFVNEEDRNKLISAALDLSRCEIYIDDTPGLSTTDVRI
KTRKLKKEKGVEVAFIDYLQLLRPPTRRSSRQEEVAEISRNLKALAKELAIPVVALAQLS
RQVEHRSDKRPQLADLRESGQIEQDADLIIFIHRPEYYKRNPSPEEQGIAEIIVAKQRQG
PTGIVKVAFLKDTASFKPLMAGVSSPSVENYEPEFEEFSEDELDLDF
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgataccctccgaccttgaaccaccttatgacgagcttgcggaaagggcggtcttgggt
gcaataatcgcagacccagaaaccatgcccaccgtgcttgagcatctcagagaggaagat
ttctattttgaaaatcacaaactgctcttttctttgctttacaaggtttgggaagacaaa
ggaaaggactgggacgatatagtcctcaaggaatatatagagaaaagaggtctgaaagaa
aggttggatatggcttttatttactctcttgtggaagaggctgctacaggaagccttctt
gaagaagccataagaaatgtaaaggaaaaatcaggtcttaggcgtctcatggacctttct
ctgaacgtgctaaggggcataagggaagagccagaccttgagaaccttcttgagctctta
aatacaaagctaatagaaatatccgaaaagcagatagttagccattactggcacataagg
gatgtggcgagggatgttattgatattatagaaaagcaccgaaagcaggaaaaacttata
actggtagggcaacgggatttcttgaccttgacactctaaccactggctttcatccctct
gaccttatcatagttgctgccagaccgggcatgggcaaaagtagttttatgctctccatg
gcaataaacatggcgatgcaggaaaaagctccagttgtcatatactctctggagatgagc
aaggaacagcttgtgatgagggctttgtccatgctttccggtgtgcctcttcaaaacata
agaagaggctttgtaaacgaggaggacaggaacaagctcatatccgccgctctggacctc
tcaaggtgtgagatatacattgacgatacgccggggctttccaccaccgatgtgaggata
aagaccagaaagttaaagaaagaaaagggtgtggaagtagcctttattgactatcttcag
ctccttagacctcccacaagaaggtcttcaagacaggaggaggtggcggagatatcaaga
aacctcaaagctctcgcaaaagaacttgccatacccgtggtggctctggcacagctatcc
cgtcaggtggaacacaggtcagacaaaagaccacagcttgcggacctaagagagtctgga
cagattgagcaagatgcggaccttatcatattcatccacagaccagaatactacaaaaga
aacccatcaccggaggagcaaggaattgcggagataatcgtagcaaagcaaaggcaagga
cccactgggatagttaaagtggcctttttgaaggataccgccagcttcaaaccgcttatg
gcgggagtgagtagcccctctgtggagaactatgaaccagagtttgaggaattctcagaa
gacgagcttgacttagacttttag
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