Pampinifervens florentissimum: G3M65_03550
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Entry
G3M65_03550 CDS
T11282
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
pflo Pampinifervens florentissimum
Pathway
pflo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pflo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
G3M65_03550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflo03021
]
G3M65_03550
03400 DNA repair and recombination proteins [BR:
pflo03400
]
G3M65_03550
Enzymes [BR:
pflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
G3M65_03550
Transcription machinery [BR:
pflo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
G3M65_03550
DNA repair and recombination proteins [BR:
pflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
G3M65_03550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_5
Delta_lysin
MafI2
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
QID32900
LinkDB
All DBs
Position
602199..603152
Genome browser
AA seq
317 aa
AA seq
DB search
MLREFLFPSKVYWEERTRTYGRFVMEPLERGFGITVGNSLRRTLLSSIQGVALTAVKIYG
VYHEFSAVDGVQEDTLEIIANLKKVRFKLHNSDVEVLYLKKKGEGVVYAKDISVPPSVEV
VNPDQKILTITDPNKEINIELRIEKGFGYVPTEEMEVLGEVGWILVDADFSPVRQVAFRV
EKTRVEKRSDYDRLIMEVYTDGTKTPEEVIKEAVDLIIKNFTPLENISFEVPVIEEPVSV
VEEFVEKLSLPIEELDVSQRALNSIKRMGISTIGDLVKLTEEDLKGTKNVGRKAINEIKE
ALKQMGLYLGMDIESRR
NT seq
954 nt
NT seq
+upstream
nt +downstream
nt
atgcttagagagtttcttttcccctcaaaggtttattgggaagaaaggacaaggacatat
gggcgatttgtgatggaacctctggagaggggtttcggtataactgtaggaaactccctc
agaagaacgctcctgtcctccatacagggagttgccctaactgcggtaaagatatacggt
gtttatcacgagttttcagcggttgatggtgtccaagaggatacccttgaaataatagca
aacctcaaaaaagttaggtttaagctccacaattctgatgtggaggtgctttatctcaaa
aagaaaggcgaaggtgttgtctacgcaaaggatataagcgttcctcccagcgtggaagtg
gtaaaccctgaccagaagatacttaccattacggaccccaataaggaaataaacatagag
ttaaggatagaaaagggttttggatatgtgcctacggaggaaatggaagtccttggggag
gtaggatggatactggtggatgcggatttctcaccggttcgtcaagtggccttcagagtg
gaaaagacaagggtggagaaaagaagcgattacgataggcttataatggaagtctacaca
gatggcacaaaaaccccagaagaggtcataaaggaagcggttgatctaataattaaaaac
tttactcccctcgaaaacatatcctttgaggtgccagtcatagaggagccagtgtcagtg
gttgaggagtttgtggaaaagctaagccttcccatagaggaactggatgtatcccagcga
gctctcaattcaataaagaggatgggtatatctaccataggagaccttgtaaagctcaca
gaggaagacctcaaagggacaaagaacgtgggtaggaaagccatcaatgagataaaggaa
gctctcaaacagatggggctttacctgggtatggacatagaaagtaggaggtaa
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