Pampinifervens florentissimum: G3M65_05310
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Entry
G3M65_05310 CDS
T11282
Symbol
topA
Name
(GenBank) type I DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
pflo Pampinifervens florentissimum
Brite
KEGG Orthology (KO) [BR:
pflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pflo03032
]
G3M65_05310 (topA)
03400 DNA repair and recombination proteins [BR:
pflo03400
]
G3M65_05310 (topA)
Enzymes [BR:
pflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
G3M65_05310 (topA)
DNA replication proteins [BR:
pflo03032
]
Prokaryotic type
DNA Topoisomerases
G3M65_05310 (topA)
DNA repair and recombination proteins [BR:
pflo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
G3M65_05310 (topA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
QID33218
UniProt:
A0A6C1BRA1
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Position
911685..913292
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AA seq
535 aa
AA seq
DB search
MKLFIVESPTKAKTIAKYLGEGWIVRATLGHIKDLPEDRLGVDEETLKPTFVWVRGKRAL
MEKLKALARKAESIYIGTDPDREGEAIAYFIYKELENLKKPISRVVFYEVTPQGIRSAIQ
KPTTINQNLVKAQFARRVLDRLIGYKLSPYLWRALSRNTLSVGRVQSPALRLIVEREREI
MAFRKKEYYYIKVVFEKDGVEFSAFWDYRFEKPENAKPYLEKLKSALFEVLSYEEKEEKH
EPPKPFITSSLQTVASGVLKVGVEQVQKMAQKLYEEGYITYPRTDSYRMNPQKAEEFMKY
IEKTYRREYVGRLRKFKEKELSQGAHECIRPTALKVPPLKGKELDLYMLILKRTLASLSS
PAVFLKKKAVIVPIYEKRKGEDMRFLAKGSELVFDGYLRIYPEEQEIVKLPPLKKGEVLK
PKKILLEKRQTQPPSRYTEGSLVKKLEELGIGRPSTYAVIVKTLKERGYVVEEKGHLKPT
EIAFEVADFLQENFPKVIDYAFTSQMEGGLDKVEEGQRDWREVVREFFSQVQSGL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgaagctctttatagtggagagccctacaaaggcaaaaaccatagccaagtatttaggg
gaaggttggatagttagagctactctgggtcatataaaggacctgccagaggacaggctt
ggtgtagatgaggagactttaaagccaacctttgtatgggtaaggggtaaaagagcgctt
atggagaagttaaaggctctggctcgcaaggcagagtccatatacataggcacagacccg
gacagagaaggagaagccatagcctactttatctataaggagcttgaaaaccttaaaaag
cccataagtagagtagttttctatgaggttactcctcaaggtataaggtccgccatacaa
aagcctaccactataaaccaaaaccttgtaaaggcacagtttgccagaagggtgcttgac
aggctcataggttataagctctctccctatctgtggagagccctcagcagaaataccctc
tcggtgggaagggttcaatctcctgctctaaggctcatagtggaaagagaaagggagata
atggcttttagaaaaaaggaatactactacataaaggtggtctttgaaaaggatggtgtg
gagttttccgccttttgggactataggtttgaaaagccagaaaatgccaagccctacctt
gaaaagttaaaatctgccctttttgaggtcctaagctatgaagagaaagaagaaaaacat
gaacctccaaagccctttataacttcaagtcttcagacagtagccagtggggttttaaag
gttggtgtggagcaagtgcaaaagatggctcaaaaactctacgaagaggggtatatcact
tatccaaggacggacagctataggatgaacccacagaaggcagaggagtttatgaaatac
attgaaaagacttatagaagggaatatgtgggtaggctaaggaagttcaaggaaaaggag
ctctctcagggtgctcatgaatgtataagacccacagcactaaaggtcccgcctcttaag
ggaaaggagttagacctttatatgcttatactaaagagaacccttgcaagcctttcaagc
cctgcggtctttctcaaaaagaaggcggttatagtgcccatatacgagaaaaggaagggt
gaagatatgaggtttttagctaaaggttcagagcttgtctttgatggatatttgagaatt
tacccagaggaacaggagattgtgaaactaccacctttgaaaaagggagaggttctaaag
cctaagaagatactccttgaaaagaggcaaactcaaccaccatcaagatacacagagggc
tctctggttaaaaaacttgaagagcttggcataggtagaccttccacctatgcggttata
gtaaaaaccctaaaagagcgaggctatgtggtagaggagaagggacacctaaagcccact
gaaatagcctttgaggtggcggactttttgcaggaaaacttcccaaaggtaatagactat
gcctttacaagccagatggaggggggtcttgacaaggtggaagagggtcaaagggactgg
cgtgaggtggtaagagagtttttctcacaagttcaatcggggctataa
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