Perca fluviatilis (European perch): 120543710
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Entry
120543710 CDS
T11622
Symbol
pds5b
Name
(RefSeq) sister chromatid cohesion protein PDS5 homolog B
KO
K11267
sister chromatid cohesion protein PDS5
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
120543710 (pds5b)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pflt03036
]
120543710 (pds5b)
03400 DNA repair and recombination proteins [BR:
pflt03400
]
120543710 (pds5b)
Chromosome and associated proteins [BR:
pflt03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
120543710 (pds5b)
DNA repair and recombination proteins [BR:
pflt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Shu complex and associated proteins
120543710 (pds5b)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PDS5
PI-TkoII_IV
HEAT_EF3_N
EnP1_C
Motif
Other DBs
NCBI-GeneID:
120543710
NCBI-ProteinID:
XP_039632812
LinkDB
All DBs
Position
16:18785250..18824857
Genome browser
AA seq
1409 aa
AA seq
DB search
MAHSKARVTDGKVTYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSAQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFQVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSVSDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNDERLQVVKLLAKMF
GAKDSELAAQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEFLRVRSH
DPEEAIRHDVIVSIVTAAKKDLSLVNDALLNFVKERTLDKRWRVRKEAMMGLASIYRKYS
LQGEGGREASKQISWIKDKLLHIYYQNSIDDRLLVERVFAQYMVPHNLETTERMKCLYYL
YATLDTNAVKALNEMWKCQNLLRHHVKDLLDLIKKPKSEASSKAVFAKVMVITRNLPDPG
KAQDFVKKLAQVLDDDERIRDQLETLVSPSCSCKQAEVCVRDITKKLGSPKQPSNPFLEM
VKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEEEGVPTEEAIRAGLELLKVLSFTH
PVSFHSAETFESLLGCLKMDDEKVAEAALQIFKNTGSKMEESFPHIKSVLLPVLQAKAKR
GPPRQAKYAIHCINTMFTNRDTHFAQIFEPLHKGLDPANLEQLITPLTTLGHLAQLAPEQ
FAAPLKSLVANFIVKDLLMNDRVPGKKTTKLWVPDDEVSPETLAKIQGIKLMVRWLLGVK
NNQSKSGNSTLRMLTAILHSDGDLTEQGRMGKPDMSRLRLAAACALLKLAQEPCYHEIIT
LEQYQLCALVINDECYQVRQCFSQKLHRGLCRLRLPLEYMAVFALCAKDPVKERRAHARQ
CLVKNVNIRREYLKQHAAISDKLFSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKEIKEA
LWFVLEIIMAKNENNSHAFIRKMVENIKQTKDAQSSSDPKTNEKLYTVCDVAMHIIMSKS
TTYSLESPKDPVLPTCFFTKPDKNFSNTKNYLPPEMKSFFTPGKPKSANVLGAVNKPLSS
AGKPIQSKASRMETASNDDPSSNPGSPQRSKTRHDSTEMDHSENEDISLKRADSTDKDIE
KPRSRKRGVTSSDDQDSKPKRGRKKAAANTTAAAESEEQWDEDNRPEDEQNSPPKKGRRG
RPPKSATPSQDTPAKGKRGRKKAAPPPEEEEEEEEEEEEKVEEEAEEEEEEEEEDDRSSE
NLELKPKGGRQARAPRRSQGTESAESTPQKRRGRPPKSAQPPAKKPVRGGRSKAAAAKDD
SEEDDEEEEEEQEDEPTPKGRKKAAGRRR
NT seq
4230 nt
NT seq
+upstream
nt +downstream
nt
atggctcactctaaagctcgagtcacagacgggaaggtgacctaccccccgggggtcaag
gagatctctgacaaaatctccaaagaagaaatggtccgcaggctcaagatggttgtgaag
accttcatggacatggaccaggactctgaggaagagaaggagctgtacctgaacctggcc
ctccacctggcctcagacttcttcctcaaacatccagataaggacgtgcgtctgctggtg
gcctgctgcctggcagacatattcaggatttacgccccagaggcgccctacacctcccca
gataaactcaaagacattttcatgttcatcacaagacagctcaaaggactggaggacact
aaaagtgcccagttcaacagatacttctacctgcttgagaacatagcatgggtgaagtcc
tacaatatttgctttgagcttgaagacagcaatgagatattcacccagctttacagaaca
ctcttccaggtcatcaacaatggccacaaccagaaggtgcacatgcatatggtggacctg
atgagctccatcatctgcgaaggagacactgtatcacaggagctgttggacaccgtgttg
gtcaatctggtcccagcacacaagaatttgaataaacaagcgtatgacctggccaaagct
ctgctgaagaggactgctcaggctattgaaccatacatcaccaatttcttcaaccaggtg
ctgatgctgggaaagacctcagtcagcgatctgtccgaacatgtttttgacctcatcttg
gagctttacaacatagacagccatcttctgctctcagtgctgccacagctcgagtttaag
ctcaagagtaatgacaatgatgagaggctgcaggtggtgaagctgctggctaagatgttt
ggagccaaggactctgagttggctgcacagaacaaaccactctggcagtgttacctgggc
aggtttaatgacatccatgtgcctatcagactggagtgtgtcaagtttgccagtcattgt
ctcatgaaccacccagacctggccaaagacctcacagaattcttgagggtcagatcacat
gacccagaggaggccatccgccatgacgtcatcgtctctatagtaactgctgccaagaaa
gacttgtctctagtgaatgatgcattgcttaattttgttaaggagaggactttggacaag
agatggcgtgtacgtaaggaggccatgatgggcctggcttcgatctacaggaagtactcg
cttcagggagagggagggagggaggcctctaaacagatttcctggatcaaagacaagctg
ctccacatctactaccagaacagtatcgatgacaggttgctggtggagcgagtctttgcc
cagtacatggttcctcacaacctggaaaccaccgagaggatgaagtgtctttactacctg
tatgccacccttgacacaaatgctgtcaaagctttgaatgagatgtggaagtgccagaat
ctgctgagacaccatgtgaaagacctgctagacttgatcaaaaaacccaagtctgaagca
tcgagcaaggccgtattcgctaaagtcatggtgatcacaagaaacctgccagacccgggc
aaggctcaggactttgtaaagaagcttgctcaggtcctggatgatgacgagcggatcaga
gatcagttggaaaccttagtcagcccctcgtgctcctgcaagcaagctgaagtgtgtgtg
cgagacatcactaaaaagcttggcagccccaaacagcccagtaatccattccttgaaatg
gtcaagttcctgctggagagaattgctcctgtacacatcgacacagaatccatcagtgct
ttgataaaacaggttaacaaatctatagacggaacagctgatgatgaggaggagggcgtc
cccactgaagaggccatcagagcaggactggaactgctgaaggtgctgtcgttcacccac
ccagtgtcgttccactctgcagagacgtttgaatccctgttgggttgtctgaagatggat
gacgagaaggtggcagaggctgcgctgcagatcttcaagaacacgggcagcaagatggaa
gagagtttccctcacatcaaatctgttttgctgccggtactgcaggccaaagccaagaga
ggcccccctcgccaggccaagtatgccatccactgcatcaacaccatgttcaccaacaga
gacacacacttcgcccaaatctttgagcctctgcacaaaggcctggaccctgctaacctg
gagcagctcatcactcctttgaccaccctgggtcacctggctcagctggcccctgaacag
tttgcagcaccactcaaatctctagtcgccaacttcattgtgaaggatctgctcatgaac
gacagggtcccaggcaagaagacaaccaaactttgggttcctgatgatgaagtgtccccg
gagactctggccaagatccagggcataaagctgatggtgcggtggttattaggagtaaag
aacaaccagagcaaatcgggcaactccaccctgaggatgctgactgcaattctacacagt
gacggagatttaaccgagcagggcaggatgggtaaaccagacatgtcgaggctgcggctg
gcagctgcgtgcgccctgctgaagctggcacaggagccctgctatcatgaaatcatcaca
ctggagcaatatcagctttgtgctctcgtcatcaatgatgaatgctaccaggtgcgacag
tgtttttcccagaagctccaccggggcctctgccgcctccgtctgcctctggaatacatg
gcagtgtttgctttgtgtgccaaggaccctgttaaggagaggagggctcacgctcgccag
tgcctggtgaaaaatgtcaacatacgccgagagtacctcaaacagcacgccgccatcagc
gacaagctgttctctctgctgccggagtatgtggtgccctacaccatccacctgctggca
catgacccagactacgtcaaagtacaggacatcgagcagctcaaagaaattaaagaggct
ctgtggtttgtcctggagattatcatggcaaagaatgagaacaacagccatgccttcata
aggaaaatggtggaaaatatcaaacagacgaaagatgcccagtcctccagtgatcccaaa
accaacgagaaactctacacagtgtgtgatgtagccatgcacattatcatgtcaaagagc
accacctacagcctggagtccccaaaagaccctgtgctacccacatgcttcttcaccaaa
cccgacaagaatttcagcaacacaaaaaattatcttccaccggagatgaagtcattcttc
acaccaggaaagcccaagtctgctaacgttttgggggcagtaaacaagcccctgtcgtcg
gcggggaaaccaatccagagtaaagcttctcgtatggagactgccagcaacgacgacccc
tcgtccaacccaggctccccccaacgcagcaagaccaggcatgacagcacagaaatggat
cacagtgaaaacgaggacatcagcctgaagagagcagacagcactgacaaggatatagaa
aagccccgcagtcgcaaacgtggcgtgacctccagtgatgaccaggacagcaaaccaaag
cgtggacgcaagaaggcggcagccaacacaactgcagcggccgagtctgaggaacagtgg
gacgaggacaatcggccagaggatgaacagaacagcccaccgaaaaaaggacgcaggggc
cggcctccaaagtctgctactcccagtcaggatactcctgctaaggggaagagggggcga
aagaaggcagctcctccaccagaggaggaggaggaggaggaggaggaggaagaagagaag
gtggaggaggaagcagaggaggaggaagaggaggaggaagaggacgataggagcagtgaa
aatctggagttgaagcccaagggaggcaggcaagccagggcgccgcggcgatcacaaggc
acggagtcagccgagtccacaccgcagaagaggagaggacgtccgcccaaatcagctcag
cctcctgccaagaaaccagtgcgtggtgggcgatcgaaggcagctgctgctaaagacgac
tctgaggaagatgatgaagaggaggaggaggagcaagaggacgagccaacaccgaagggt
cgcaagaaggcagcagggcgaagaagatga
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integrated database retrieval system
