Perca fluviatilis (European perch): 120543887
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Entry
120543887 CDS
T11622
Symbol
supt6h
Name
(RefSeq) transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflt03021
]
120543887 (supt6h)
03036 Chromosome and associated proteins [BR:
pflt03036
]
120543887 (supt6h)
Transcription machinery [BR:
pflt03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
120543887 (supt6h)
Chromosome and associated proteins [BR:
pflt03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
120543887 (supt6h)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
YqgF
HHH_7
HTH_44
SPT6_acidic
Tex_central_region
Spt6_S1
S1
HHH_3
S1_RRP5
HHH_9
SH2
Tex_YqgF
Tex_N
Motif
Other DBs
NCBI-GeneID:
120543887
NCBI-ProteinID:
XP_039633183
LinkDB
All DBs
Position
16:18012784..18033777
Genome browser
AA seq
1751 aa
AA seq
DB search
MADFIDSEAEESEEEFEEKDLKPKKTQRFLEEDDEEEEENTEDQDERGNLRGLIDDGDEE
EGEEEEGPARSASGAGSDSEEEVRHRRKKRNYDDYLDDDDLDLIEENLGVKVKRRKKKYD
RVKTLDDDEEDDDEKDLIADEIFHGDAEGELEEGEAVDEPLHHADDDEEGEDEESDIDDF
IVDDDGQPITKKRGKKFSGYTDAALQEAQEIFGGDFDFADFDADTYDQGEEEEEDQDEES
WDRPKKQTKRRQGRKSIFEIYEPSELESSHMTDQDNEIRSTDMPERFQLRSIPVKPAEDD
ELEEEAEWIFRHGFSTLTISMQESTDYLDRGTTTNFSRKGPSTIAKIKEALNFMRNQQFE
VPFIAFYRKEYVEPELNINDLWKVWQWDEKWTQLKTRKQNLTRLFRKMQSYQYEQISADP
DKPLADGIRPLDTADMERLKDVQTLEELGDVYNHFLLYYGRDIPKMQNAAKASKKRLKKI
KEVSEDGEEEELEVEEEEEPKGPDLKLASRRDMYSICQSVGLDGLAKKFGLTPEQFGENL
RDSYQRHETEQFPAEPVELAKDYVCSQFSTPETVLEGTRYMVAMQIAREPLVRHVLRQTF
QERAKINIKPTKKGKKEVDEAHFAYSFKYLKNKPVKELNGEQFLKMCLAEDEGLLSIDIC
IDLIGVKGYAGDQTYFDEIKQFYYRDEFSHQVQEWNRQRTLAIERALTQFLYPQMAKELK
SKLITEAKESIVRSCCRRLYNWLKVAPYRPDQQVEEDDDLMDESQGKGIRVLGVAYAPSR
DTPVFCALINGEGEVVDFLRLPYFMKRRNAFKEDEREKKAHDIENLKRFLSGKKPHVVAV
AGENRDAQMIMEDIKRTISELEQESSLPAVGVELVDNELATLYMNSKKSEVDFRDYPPLL
RQAVSIARKIQDPLMEYAQVCSSDDDILCLKLHPLQEHVVKEDLLCALYCEFINRVNEVG
VDVNKAIAHPHTQSLVQYVCGLGPRKGSHLLKILKQNNTRLENRTQLVTMCHMGPKVFIN
CAGFIKIDTASLGDSTDSYIEVLDGSRVHPETYEWARKMAVDALEYDESAEDANPAGALE
EILENPERLKDLDLDAFAEELERQGYGNKGITLYDIRAELSCRYKDLRVVYRVPNTEEVF
NLLTKETPETFYIGKLITSIVTGIAHRRPQGESYDQAIRNDSTGLWQCPFCQQDNFPELS
EVWNHFDSGSCPGQAIGVRSRLDNGVQGFIPTKFLSDKVVKHPEERVKVGMTVHCRIMKI
DIEKFSVDLTCRTSDLMDKANEWKLPKDSYYDFDTESEDQKQEEELKKKQQRTPYIKRVI
AHPNFHNISFNQAEKMMETLDQGDLIIRPSSKGENHLTVTWKVADGIYQHVDVREEGKEN
AFSLGHTLWINNEEFEDLDEITARYIQPMASFARDLLGHKYFQECNWGSKEKMEELLVKT
KREKPTFIPYFISACKDLPGKFILGYQPRGKPRVEFVTITPDGFRYRSQIFPTVNGLFRW
FKDHYQEPVPGITPSNSSRTRTPASLNATPANINIADLTRAVNALPRNMTSQMFNAIAAV
TGQGQNPNTTPAQWGSSQYGYGGSTGGGGGSSSAYHVFATPQQPMATPMMTPSYSYTTPS
QQALGTPQYPGSTPQSSHSHTTHGHPHGSHVSHHSHHGHHSSHQGHSSGTPSSSTSSRGR
TPQQQPPKASGSNASAVDWGKMAEQWLKEKEAEGRKKAQRMTPRPSPSPMIESTPMSIAG
DATPLLDEMDR
NT seq
5256 nt
NT seq
+upstream
nt +downstream
nt
atggcagactttattgatagcgaggctgaggagtcagaagaggagttcgaagagaaagac
ctaaagcctaaaaagacccagaggtttttggaggaagatgatgaagaggaggaagagaac
acagaggaccaggatgaacgaggaaatttacgtggacttattgatgatggagacgaggaa
gagggggaggaggaagaaggacctgcaagaagtgcaagtggagcagggagtgactcagaa
gaggaagtaaggcatcgacgtaaaaagcgcaattatgacgactacctggatgacgatgat
ctggacctaattgaggaaaacttgggtgttaaagtgaaaaggaggaagaagaaatatgac
cgtgtaaaaacactcgatgatgatgaagaagatgatgatgagaaggacttgatcgcagat
gagatctttcatggtgatgcagagggcgagctggaggaaggcgaggctgtagatgagcct
cttcaccatgcagatgacgatgaagaaggagaggatgaggagtcggatatagacgatttc
attgtggatgatgacggccaacctataaccaaaaagaggggcaagaagttctcaggatac
acagatgcagccctccaggaggcccaagaaatttttggtggagactttgactttgctgac
tttgacgcagacacatacgaccagggcgaggaggaggaagaggaccaggatgaagagagt
tgggaccgacctaagaagcagaccaagaggaggcaagggaggaagagcatctttgaaatc
tacgagcccagcgagctggagagtagtcacatgactgaccaagacaatgaaatccgctct
acggacatgcctgagaggttccagttgcgatctattcctgttaaacctgctgaggatgat
gagctggaagaggaagcagagtggatcttcagacatggcttctctactcttactatctct
atgcaggagagcacagattatctagacagggggaccaccacaaatttcagcaggaaaggc
cccagtacaattgccaagatcaaagaggccctcaacttcatgaggaatcaacaatttgag
gttccattcatagctttctacagaaaagaatatgtggagccggaactaaacatcaacgac
ctgtggaaggtgtggcagtgggatgaaaagtggactcaactgaagactcgaaagcagaac
ctgacccgtctgtttcggaagatgcagtcctaccagtatgagcagatctcagctgaccct
gacaaacctttggctgacggcatccgtcctctggacaccgctgacatggagaggctgaaa
gatgtgcagactcttgaagagctgggtgatgtgtacaaccactttctgctctactatggc
cgagacatccccaagatgcagaatgctgccaaggccagtaagaagaggcttaagaagatc
aaagaagtgtcagaggatggtgaagaagaggaattggaggtagaagaagaagaagaaccg
aaaggacctgacctcaagctggcgtctcgtagagatatgtacagcatctgtcagagcgta
ggacttgatggcttggctaaaaagtttggtttaactccagagcagtttggagaaaatttg
agagacagttaccagcgtcatgagacagagcagttcccggctgagcccgtagagctggcc
aaagattatgtttgcagccagttcagcactcctgagacagtgctagaaggaaccaggtac
atggtggccatgcagattgctcgtgaacctctggtcagacatgttctccgacagaccttc
caggagagggccaagatcaatatcaagcctacaaagaagggcaaaaaggaggtagatgag
gctcattttgcctactccttcaagtatcttaagaacaagcctgtaaaagagctgaatggg
gaacagttcttgaagatgtgcctggcagaggacgaagggctgctttccattgacatctgt
atagaccttataggggtcaaagggtatgctggggaccagacatactttgatgagatcaaa
cagttctactacagggatgagttcagtcaccaggtgcaggagtggaacaggcagcgaacc
ttagccatagagagagctctcactcagttcctctaccctcagatggcgaaggaactcaag
agcaaactcatcactgaggccaaagagagcattgtcaggtcctgctgtcgtcggttgtat
aactggctcaaggtggctccttaccgaccagatcagcaggttgaggaagacgatgatctg
atggatgagagtcagggcaaaggcattcgggttctgggtgtagcctatgcgcccagcaga
gacacaccagttttctgtgctctgatcaacggggaaggggaggtggttgactttttgcgt
ctgccctatttcatgaagaggaggaatgcctttaaggaggacgagagagagaagaaggcc
cacgacattgaaaatctcaagaggtttctgtctggcaagaaacctcatgtggtagctgtc
gctggggaaaaccgagatgctcaaatgatcatggaggacatcaagaggactatcagcgag
cttgagcaagagtcctctctgcctgctgtgggagttgaacttgttgacaatgaattggcc
acactgtacatgaacagcaagaagtctgaggttgattttagggattaccctcccttgctg
cgacaggctgtgtcgatagccaggaagatccaggatccgctgatggagtatgctcaagtt
tgcagcagtgatgatgatattctctgcctcaaactacacccgctacaggaacatgtggtg
aaggaagatttgctctgtgctctttactgcgaattcatcaaccgtgtcaatgaggttgga
gttgatgtgaacaaggccattgcccatcctcacactcagagcctggttcagtatgtctgt
ggcctgggaccaagaaagggctcccacctgctcaagattctgaagcagaacaacactcgt
ctggaaaacagaacccaactggtcacaatgtgtcacatgggacccaaggtttttatcaac
tgtgccggtttcatcaagattgacacggcatcgctcggggacagtacggactcctacatc
gaggttctggacggctctcgtgtccaccctgagacgtacgagtgggctcgcaagatggct
gtggacgccctcgagtatgatgagtcggcagaagatgccaacccagctggagctctggag
gagatcttggaaaatccagaacgtctcaaagatcttgacctggatgcctttgctgaagag
cttgagagacagggttacggcaacaaggggattactctgtatgatatccgtgcagagctg
agctgcaggtacaaagatctgagagttgtctacagagtccccaacactgaggaggtcttc
aacctgctcaccaaggagactccagagaccttttatattggtaagctgatcaccagtata
gtaactggtattgctcaccggcggcctcagggagagagctacgaccaggccatccgtaac
gattctacggggctgtggcagtgtcccttctgccagcaggacaacttccctgaactcagc
gaggtgtggaatcactttgacagcggttcgtgtccaggtcaggccattggggtgcggtcc
agattagataatggcgtccagggattcattcccaccaagtttctcagtgacaaagtggtc
aaacaccctgaggagagggtcaaggtgggcatgacagttcactgccgcatcatgaaaatc
gacattgagaaattcagtgtcgacctcacatgccgaacctcagatttgatggacaaggcc
aatgagtggaagctccccaaggacagctactatgactttgatacagagtctgaagaccaa
aaacaggaggaggagctcaaaaagaaacaacagcgaacaccatatataaagcgtgtgatc
gcccaccccaacttccacaatatcagtttcaaccaggcagagaaaatgatggagaccctg
gaccagggagacttgatcatcagacccagcagcaagggagagaaccacctcacagtcacc
tggaaggtggctgatggcatctaccagcatgtggatgtaagagaagaaggcaaagaaaat
gcattcagcttagggcacacactctggatcaataatgaagagtttgaagatctggatgaa
atcactgctcggtacattcagccaatggcgtcatttgcccgggatctactggggcataag
tacttccaggagtgcaactgggggagcaaggagaaaatggaggagttattggtcaagaca
aagagggagaagcctacttttattccttactttatttcggcatgtaaagatctgccagga
aaattcattttgggctaccagcctcgcggaaaaccacgggttgagtttgtgaccatcacc
ccagatggttttcgctaccgttcacagatatttcctacagtgaacggactattccgctgg
tttaaggaccattaccaagagcctgtgccaggcatcactcccagcaacagcagccgaaca
aggacacctgcatccctcaacgccaccccagccaatatcaacattgcagacttgacacga
gcggtcaacgccctccctcgcaacatgacgtctcagatgttcaatgccatcgccgcagtc
acaggccagggccagaaccccaacaccacccctgcccagtgggggtccagccagtacggc
tacggtggcagcacaggaggaggaggagggagctcctctgcttatcatgtatttgcaaca
cctcagcagcccatggcgacgcccatgatgacgcccagctactcctacaccacaccgagc
cagcaggccctgggcacgccacagtaccccggctccacccctcagtcctcccactctcac
accacacatggccacccacacggaagccatgtgtcacaccacagccatcacggccatcac
agtagccaccaaggccactcatccggcacgccgtcatcctccacctcatccagaggacgg
actccacagcagcagccaccaaaggccagcggcagcaacgcctctgcagtggactggggc
aagatggcggaacagtggctgaaggagaaagaagcggaggggcggaagaaagcccagagg
atgacgccacgaccgtcgcccagccccatgatcgagagcacacccatgtcaatcgccgga
gacgccacacccctgctggacgaaatggaccgatag
DBGET
integrated database retrieval system
