Perca fluviatilis (European perch): 120545356
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Entry
120545356 CDS
T11622
Name
(RefSeq) nucleolysin TIA-1-like isoform X1
KO
K13201
nucleolysin TIA-1/TIAR
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflt03019
]
120545356
03041 Spliceosome [BR:
pflt03041
]
120545356
Messenger RNA biogenesis [BR:
pflt03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
120545356
Spliceosome [BR:
pflt03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
120545356
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Ortholog
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GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Calcipressin
RRM_3
RRM_Nup35
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
120545356
NCBI-ProteinID:
XP_039635518
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Position
17:complement(27511876..27523935)
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AA seq
390 aa
AA seq
DB search
MDDDTPKTLYVGNLSRDVTEALILELFGQIGPCKSCKMIVDTAGHDPYCFVEFYEHRHAT
ATIAAMNGRKILGKEVKVNWATTPTSQKKDTSSHFHVFVGDLSPEITTDDIKAAFAPFGK
ISDCRVVKDMATGKSKGYGFVSFFNKWDAENAIQQMGGQWLGGRQIRTNWATRKPAPKTT
NETTNSKQLSFDEVVSQSSPSNCTVYCGGVTTGLTEQTMRQTFSPFGQIMEIRVFPDKGY
SFVRFNSHEAAAHAIVSVNGTSIEGYVVKCYWGKETTDMVSPIQQVQLPQQNTVSFAAQP
YSQWGQWYSNTAAQQIGQYVPNGWQVPSYGVYGQTWDQQGYNRHSHLHAGAGWTGVGAVS
NGGMVEPGQGVNGTVLTNQAGMSAAGYHTH
NT seq
1173 nt
NT seq
+upstream
nt +downstream
nt
atggacgatgacacgcccaaaaccctgtatgtggggaatctgtcccgggacgtgacagag
gccctcatcttagagttgtttgggcagattggaccctgcaagagctgtaaaatgatagta
gatacagcaggtcatgatccgtactgctttgtggagttctatgagcatagacatgccact
gccacaatcgcagccatgaatggtcggaaaatactgggtaaggaggtcaaggtcaactgg
gccaccacgccaaccagccaaaagaaagacacgagcagtcacttccacgtctttgttgga
gatcttagtcctgaaatcaccacagatgacataaaagcagcttttgctccatttgggaaa
atatcggattgtcgagtggtgaaagacatggccacaggtaaatctaaaggctatggcttt
gtctccttcttcaacaaatgggatgcagagaatgccattcagcagatgggaggacagtgg
ctgggaggaaggcagatcaggaccaactgggccacaaggaagcctgctcctaaaactaca
aatgagacaaccaattccaagcagctatcttttgatgaggtggtcagccagtccagcccc
agcaactgcaccgtctactgcgggggagtcacaaccggtctcacagagcaaaccatgaga
cagaccttctcacctttcggccaaataatggaaatccgagttttcccagacaaaggctac
tcatttgtgaggttcaactcccatgaagcagcagctcatgccatcgtgtcagtcaacggc
acgtccatagagggctatgttgtgaagtgttactggggcaaagaaacgacagacatggtc
agccccatacagcaggtacagctgccacagcagaacacggtgagcttcgcagcgcagccc
tacagtcagtggggtcagtggtacagcaacacagctgcacagcagattggtcagtatgtg
cccaatggatggcaggtgccgagctacggagtctacgggcagacctgggatcagcagggc
tacaatcgtcacagtcatttacacgctggtgccggatggacaggtgtgggcgctgtgagc
aacgggggcatggtggagcccgggcagggagtcaacgggacggtgctgaccaaccaggct
ggcatgagcgctgctggctaccacacccactga
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