Perca fluviatilis (European perch): 120547881
Help
Entry
120547881 CDS
T11622
Name
(RefSeq) collagen alpha-1(IX) chain-like
KO
K08131
collagen type IX alpha
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04510
Focal adhesion
pflt04512
ECM-receptor interaction
pflt04518
Integrin signaling
pflt04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
120547881
04518 Integrin signaling
120547881
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120547881
09142 Cell motility
04820 Cytoskeleton in muscle cells
120547881
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pflt00535
]
120547881
Proteoglycans [BR:
pflt00535
]
Extracellular matrix (ECM) proteoglycans
Others
120547881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
120547881
NCBI-ProteinID:
XP_039639592
LinkDB
All DBs
Position
19:complement(20332595..20347554)
Genome browser
AA seq
679 aa
AA seq
DB search
MAQVPSVRGPLLVLLLQLVLICSAQRSQGPPGPPGPAGVPGIDGIAGERGADGEDGLPGP
DGDAGKPGSSGLPGIPGNDGLTGPIGDPGPDGPPGQKGEPGTSGPRGAAGVGLDGPPGPP
GTGGLLGEVGKVGPIGSMGVRGPQGPAGPTGPRGASGMQVSGDLCPNSCPPGTSGHPGLP
GMKGHKGVKGEAGEPGKQGHKGEEGDQGGPGEVGSQGPVGPQGIRGAMGMMGRKGDMGAR
GLDGVPGPQGVSGATGDQGQRGVMGELGPKGETGIQGLRGITGLPGPKGEAGLPGVDGRE
GIPGMPGAKGGIGKAGVPGEVGLQGLPGLPGVPGPKGLSGPKGDAGQAGLPGTMGPAGKA
GERGDQGELGPVGPIGEPGAIGEQGPVGSAGKPGARGPKGDPGLPGLPGPPGLPGVKGER
GERGEGGPKGEQGSQGDEGDAGDKGDIGQSGESGPKGEVGNPGEPGQRGPEGSRGQPGIE
GPSGTPGPRGMQGNRGPPGVRGSQGPAGKEPSDQHIKQVCMRVMQEQLAQLAASLRRPES
GVVGLPGKPGPPGQPGSPGDNGFPGQSGARGLPGLKGPSGIIGVKGPKGEMGDRGSRGPT
VRGPKGQPGPPGLPGEPGKPGYGQDGRDGQRGPPGVPGQPGVPGPPGAAGPNGYCDPSAC
NLQAGAVHQSLDVKGPAGN
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
atggctcaggtccccagcgttagagggccacttttggttctgcttctgcagcttgtcctt
atctgctccgctcaaaggagccaaggacctcctggccctcctggacctgcaggtgtccca
ggaattgatggcattgctggggaaaggggagcagatggcgaggatggacttcctggacct
gatggagatgcaggtaaacccggctcttcaggattacctggaattcctggaaatgatggt
ttgaccggccctattggagatccagggcccgacggcccccccggacagaaaggtgaacct
ggaacatctggacctcgtggagcagctggtgttgggctagatggaccccccggaccaccc
gggactggaggacttctgggtgaagtgggaaaagttggaccaattgggtccatgggtgtg
agagggccacagggacctgctggacctacggggcccagaggtgcatctggaatgcaagtc
agtggcgacctgtgtccaaactcttgtccacctgggacctctggacatcctggccttcct
ggcatgaagggccacaaaggtgtaaaaggtgaagccggagaacctgggaaacaagggcac
aagggtgaggagggggaccagggaggtccaggggaggtcggatcccaaggaccagtgggt
cctcagggaattcgtggagccatgggaatgatgggccgcaagggagacatgggagctcga
ggtcttgatggagttccaggtccccagggtgtttcaggggcaactggggatcaaggccag
agaggcgtgatgggcgagcttgggcctaaaggtgaaacgggtattcaagggctgagagga
atcacaggtcttccaggtcccaagggagaggctggcttgccgggtgtggacggtcgcgag
ggtattcctgggatgcctggagcaaagggaggcattgggaaggcaggcgttcctggagag
gtcggacttcaggggcttcctggtttgcccggtgtacctggaccaaaaggcttgagtggc
cctaagggagacgctggtcaagcaggcctgcctggaacaatgggacccgctggcaaagca
ggcgaacgcggagatcagggagagttgggacctgttggacctattggtgaacctggagct
ataggagagcaaggccctgtaggttcagccggcaagccaggtgccagaggacccaaaggt
gaccccggccttcctggtctccctggtcctcctggccttcccggggtgaagggagagagg
ggagaacgtggagaaggaggacccaaaggagagcagggatcacaaggtgatgagggagac
gctggagacaaaggggatattggtcagtcaggagaatcaggacctaaaggagaggttggt
aaccccggcgagcctggccaaagaggtcccgagggaagtcgaggccagcctggaatcgag
gggccgtctggcacacctggcccgcggggcatgcagggaaacaggggtccacctggagtc
agagggtctcagggccctgcgggtaaagagccaagtgatcagcacatcaaacaagtttgc
atgcgagtaatgcaagaacagctggctcagctagctgctagtttaaggaggccagagtct
ggagtagttggtttacctggaaaacctggaccgccagggcaacctgggtctccaggagac
aatggcttccctgggcagagtggagcaagaggccttccaggactcaaaggcccatcggga
attattggagtgaaaggacccaaaggtgaaatgggagaccgaggctccagagggcccact
gtgcgcggacctaaaggtcagccaggacctcctggacttcctggtgagccaggcaaaccc
ggctacggtcaggatggtcgggacgggcagaggggacctcctggtgttcctggacagccc
ggtgtacctgggcctcctggtgcagctggtcccaatggttactgcgacccgtcagcctgc
aacctccaggccggggctgtccaccagtctctggatgtgaagggacctgcagggaactaa
DBGET
integrated database retrieval system
