Perca fluviatilis (European perch): 120547995
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Entry
120547995 CDS
T11622
Symbol
fancl
Name
(RefSeq) E3 ubiquitin-protein ligase FANCL
KO
K10606
E3 ubiquitin-protein ligase FANCL [EC:
2.3.2.27
]
Organism
pflt
Perca fluviatilis (European perch)
Pathway
pflt03460
Fanconi anemia pathway
pflt04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
120547995 (fancl)
09124 Replication and repair
03460 Fanconi anemia pathway
120547995 (fancl)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflt04121
]
120547995 (fancl)
03400 DNA repair and recombination proteins [BR:
pflt03400
]
120547995 (fancl)
Enzymes [BR:
pflt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
120547995 (fancl)
Ubiquitin system [BR:
pflt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120547995 (fancl)
DNA repair and recombination proteins [BR:
pflt03400
]
Eukaryotic type
DSBR (double strand breaks repair)
FA (Fanconi anemia) pathway
FA core complex
120547995 (fancl)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FANCL_d3
FANCL_d2
FANCL_C
FANCL_d1
zf-RING_2
SLX1_C
zf-RING-like
zf-HC5HC2H
PHD_NSD
Tymo_45kd_70kd
zf-rbx1
zf-C2H2_AcuF
Motif
Other DBs
NCBI-GeneID:
120547995
NCBI-ProteinID:
XP_039639800
LinkDB
All DBs
Position
19:32445087..32483666
Genome browser
AA seq
370 aa
AA seq
DB search
MESPLVRDNPLLLPFNKEKTIYDGFITVQERDFRLRILLPPDRQFKRARLHCCWQLKHLL
HGYEHIVKQRLQQSADLVSFILELKTILEVGLKSHRECRSIPPPQYYSQLISEMETLGWG
KLLFIDTEFRTLRLKAEDSCGRQHVLTIKLKSKHPAEAPECSADLPVPLAMTWTPQSTLD
QLHNQFLLVLESLTEFWDVLDEIDSKTWILEPEKASRSDTMRRIAIGNNVSIKVEVDPRH
PKMLPECCLLGAEHVVTPLRNKLNANMHLWNPDCSVLHNLRDVLEIEFPSPATHEKSSFS
VECGICYSYRLDAAIPDQVCNDPRCGQPFHQACLYEWLRALPSSRQSFNIVFGECPYCSK
PITVKMAAQK
NT seq
1113 nt
NT seq
+upstream
nt +downstream
nt
atggagagtccattggtaagagacaacccactgcttttacctttcaacaaggagaaaact
atctacgacggcttcatcacagtccaggaacgggacttcagattgagaatacttctccca
ccagatcgccaatttaaacgggccaggctgcactgctgttggcagttaaaacacctgttg
catggctatgagcacatagtgaagcagaggctgcagcagtcggctgatcttgtcagtttc
attctggagctgaagaccatcttggaagtgggtctgaagagccatcgggagtgccgctcc
atccctcctccacagtattactctcagctcatctctgagatggagacccttgggtggggc
aagctgctcttcatagacacagagttccgaacgttgagactgaaggcggaggactcctgt
ggaaggcagcacgttctcactattaaactcaagtctaagcaccctgcagaggctcctgaa
tgctcagctgacctgccggtccctctggccatgacctggactccacagagtactctggac
cagctccacaaccagttcctgctggttttggagtccctcaccgagttttgggacgtcctg
gacgagattgacagtaagacctggatcctggagccggaaaaagccagccggtccgacact
atgaggcggatcgccatcggaaacaacgtatccatcaaagtggaggtggatcccagacac
cctaagatgctaccagagtgctgcctgctgggggccgagcatgtggtgactccgctgagg
aataagctgaacgccaacatgcacttgtggaacccggactgcagcgtcttgcacaacctc
cgggatgttttggagatcgaattcccgtcacctgccacccacgaaaaatctagtttcagc
gttgagtgtgggatctgttactcctatcgtcttgatgctgcgatccctgatcaagtgtgt
aatgaccctcgctgtggccagcccttccaccaggcctgtctgtatgagtggctgcgagcg
ctgccctccagcaggcagagcttcaacattgtttttggagagtgtccttactgcagcaag
cctattactgtgaaaatggcggcccagaagtga
DBGET
integrated database retrieval system
