Perca fluviatilis (European perch): 120549499
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Entry
120549499 CDS
T11622
Symbol
actn1
Name
(RefSeq) alpha-actinin-1 isoform X1
KO
K05699
actinin alpha 1/4
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04510
Focal adhesion
pflt04517
IgSF CAM signaling
pflt04518
Integrin signaling
pflt04519
Cadherin signaling
pflt04520
Adherens junction
pflt04530
Tight junction
pflt04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120549499 (actn1)
04518 Integrin signaling
120549499 (actn1)
04519 Cadherin signaling
120549499 (actn1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
120549499 (actn1)
04520 Adherens junction
120549499 (actn1)
04530 Tight junction
120549499 (actn1)
09142 Cell motility
04810 Regulation of actin cytoskeleton
120549499 (actn1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflt04131
]
120549499 (actn1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
pflt04812
]
120549499 (actn1)
04147 Exosome [BR:
pflt04147
]
120549499 (actn1)
Membrane trafficking [BR:
pflt04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120549499 (actn1)
Cytoskeleton proteins [BR:
pflt04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
120549499 (actn1)
Exosome [BR:
pflt04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120549499 (actn1)
Exosomal proteins of colorectal cancer cells
120549499 (actn1)
Exosomal proteins of bladder cancer cells
120549499 (actn1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
EFhand_Ca_insen
EF-hand_8
EF-hand_1
EF-hand_6
EF-hand_7
EF-hand_5
XisI
Motif
Other DBs
NCBI-GeneID:
120549499
NCBI-ProteinID:
XP_039642412
LinkDB
All DBs
Position
20:complement(10678542..10748194)
Genome browser
AA seq
915 aa
AA seq
DB search
MHNMDEYDGEIDYMHQEDDWDRDLLLDPAWEKQQRKTFTAWCNSHLRKAGTQIENIEEDF
RDGLKLMLLLEVISGERLAKPERGKMRVHKISNVNKALDFITGKGVKLVSIGAEEIVDGN
AKMTLGMIWTIILRFAIQDISVEETSAKEGLLLWCQRKTAPYKNVNIQNFHISWKDGLGF
CALIHRHRPELIDYGKLRKDDPMTNLNTAFDVAEKYLDIPKMLDAEDIVGTARPDEKAIM
TYVSSFYHAFSGAQKAETAANRICKVLAVNQENEQLMEDYEKLATDLLEWIRRTIPWLEN
RLPENTMQAMQQKLEDFRDYRRLHKPPKVQEKCQLEINFNTLQTKLRLSNRPAFMPSEGK
MVSDINNAWGNLEGAEKGYEEWLLNEIRRLERLDHLAEKFRQKAAIHEAWTAGKEDMLQK
HDFETASLSEIKALLKKHEAFESDLAAHQDRVEQIAAIAQELNELDYYDSPSVNARCQRI
CDQWDALGALTQKRSEALQRTEKLLETIDQLYLEFAKRAAPFNNWMEGAMEDLQDTFIVH
TIEEIQGLSTAHEQFKATLPEADKERQAILGIHNEIAKIVQTYHVNMAGTNPYTTINPQE
INAKWDKVRQLVPQRDQALIEEHARQQNNERLRRQFANQANVIGPWIQNKMEEIGRISIE
MHGTLEDQLTHLRQYEKSIVNYKPKIDQLEGDHQLIQEALIFDNKHTNYTMEHIRVGWEQ
LLTTIARTINEIENQVLTRDAKGISQEQLNEYRASFNHFDRDHSGTLGAEEFKACLISLG
FDIANDAQKRSGIMDAEDFKTCLISVGYNLGENEFSRIMSIVDPNRMGIVTFQAFIDFMS
RETADTDTADQVMASFKVLAGDKNYILADELRRELPPDQAEYCMARMAPYTGPDAVPGAL
DYMSFSTALYGESDL
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
atgcataatatggacgagtatgacggagaaattgactatatgcatcaggaagatgactgg
gatcgggatctcctcctggatcctgcatgggagaagcagcagagaaagacatttacagct
tggtgtaactctcacctgaggaaagcagggacgcagatcgagaacatcgaggaggacttc
cgggacggactgaaactcatgctgctgctggaggtcatctcaggcgaacgcttggccaaa
cccgagagaggcaagatgagagtgcacaagatctccaacgtcaacaaagctcttgacttc
atcaccggcaaaggagtgaagctggtgtctatcggagcagaggagatcgtagacggcaac
gccaagatgaccctgggaatgatctggaccataatcctccgcttcgccatccaagacatt
tctgtggaagagacatctgccaaagagggcctcctgttgtggtgccagaggaagaccgcg
ccctacaagaatgtcaacatccaaaactttcacatcagctggaaagatggtttgggtttc
tgtgcgctcattcaccgacaccgtccagagctcatcgactacggaaaactgcgcaaggac
gaccccatgaccaacctgaacacagcctttgacgtggcagagaagtacctggacatcccc
aagatgttggacgcagaagacattgtgggcactgcccgtccggacgagaaggccatcatg
acctacgtctctagcttctaccacgccttctcaggcgcccagaaggcagagacggcggcc
aacaggatctgcaaggtgctggctgtcaaccaagagaatgagcagctgatggaggactat
gagaagctggccactgatctgttggagtggatccggcgcaccatcccctggctggagaac
cgcctgcccgagaacaccatgcaggccatgcagcagaagctggaggacttccgagattac
cgccgcctccacaagccgcccaaagtgcaggagaagtgccagctggagatcaacttcaac
acgctgcagaccaagctgaggctcagcaacaggcccgccttcatgccctcggagggaaag
atggtctcggacattaacaatgcatgggggaatctagagggagcagagaagggctacgag
gagtggctcctcaatgagattcgcaggctggaaagactcgaccacctggcggagaaattc
cgccagaaagcagccatccatgaagcttggactgcaggtaaggaggacatgctgcagaag
catgactttgagacggcctcgctgtcagagatcaaggccctgctgaagaaacacgaggcc
ttcgagagcgatctggcggcacatcaggaccgcgtggagcagatcgctgccatcgcacag
gaattaaatgagctggactactacgactcccccagtgtgaacgctcgctgccagcggatc
tgtgaccagtgggacgcactgggagctctgacccagaaacgcagcgaggctctgcagaga
actgagaagctgcttgaaaccattgaccaactgtacctcgagtttgccaaaagagcggct
cccttcaacaactggatggagggcgccatggaggatctgcaggacacctttatcgtccac
accatcgaagaaatccagggattgagcacagcccacgagcagttcaaagccacgctgcca
gaggcggacaaagagcgccaggccatcctgggcatccacaacgagattgccaagatcgtg
cagacctatcatgtgaatatggctggcaccaacccctacaccaccatcaacccacaggag
atcaacgccaaatgggacaaggtccggcagctggtgccgcagcgcgaccaggctctgatc
gaggaacacgcccggcagcagaacaacgagcgtctgcgccgacagtttgccaaccaggcc
aacgtcatcgggccctggatccagaacaagatggaggagatcggccgcatctcgatcgag
atgcacggcaccctggaggaccagctgacccacctccgccagtacgagaagagcatcgtc
aactacaagccaaagatcgaccagctggagggagaccaccagctcattcaggaagctctc
atctttgacaacaagcacaccaactacaccatggagcacatccgcgtgggctgggagcag
ctgctcaccaccatcgcccgcaccatcaacgaaatcgagaaccaggtcttgacgcgggac
gccaagggcatcagccaggagcagctgaacgagtaccgcgcttccttcaaccacttcgac
agggaccactcgggcactctgggcgcggaagagttcaaggcctgcctgatcagcctgggc
ttcgatatcgccaacgatgcacagaagagatcaggaatcatggacgccgaagacttcaaa
acctgccttatctccgttggttacaacctgggggagaatgagttctcccgcatcatgagc
atagtggatcccaaccggatgggcatcgtcaccttccaggccttcatcgacttcatgtcc
cgcgagacggccgacacggacaccgccgaccaagtcatggcctccttcaaagtcctggcc
ggggataagaactacattttagctgatgagctgcgccgggagctgcctccagaccaggcg
gagtactgcatggcccgcatggccccctacacgggccccgacgccgtgcccggagccctg
gactacatgtccttctctacggctctgtacggagagagcgacctctga
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