KEGG   Perca fluviatilis (European perch): 120549838
Entry
120549838         CDS       T11622                                 
Symbol
wdr43
Name
(RefSeq) WD repeat-containing protein 43
  KO
K14546  U3 small nucleolar RNA-associated protein 5
Organism
pflt  Perca fluviatilis (European perch)
Pathway
pflt03008  Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:pflt00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    120549838 (wdr43)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:pflt03009]
    120549838 (wdr43)
Ribosome biogenesis [BR:pflt03009]
 Eukaryotic type
  90S particles
   U3 small nucleolar RNA-associated proteins
    120549838 (wdr43)
SSDB
Motif
Pfam: Beta-prop_WDR3_1st Beta-prop_WDR5 Beta-prop_IFT122_1st WD40_CDC20-Fz Utp12 WD40_Prp19 Beta-prop_THOC3 WD40 WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_WDR3_2nd ANAPC4_WD40 Beta-prop_WDR90_POC16_2nd Beta-prop_WDR36-Utp21_1st Beta-prop_WDR36-Utp21_2nd WDR55 WD40_MABP1-WDR62_2nd DSE1_N Beta-prop_TEP1_2nd WD40_Gbeta WDR90_beta-prop_4th Beta-prop_VPS8 Beta-prop_EML Beta-prop_IFT140_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_WDR41 Beta-prop_Aladin Beta-prop_WDR19_1st Beta-prop_SPT8 Beta-prop_WDR75_1st ASA1 Beta-prop_NOL10_N Beta-prop_ACSF4 Beta-prop_DCAF4 Beta-prop_SCAP Beta-prop_HPS5 WD40_MABP1-WDR62_1st Paf1 WD40_2 NBCH_WD40 AHSA1 CFAP251_N Beta-prop_IP5PC_F Beta-prop_WDR75_2nd Tricorn_2nd
Other DBs
NCBI-GeneID: 120549838
NCBI-ProteinID: XP_039642947
LinkDB
Position
20:complement(27876728..27895496)
AA seq 656 aa
MAADAGSATLQLPCVFSPKSRQYLALCAQDGRLRIWNTDSKTLQQEYVPSAHLSATCICI
AWGPCRTVKEGPQRKKRKSEAGQVEEKADLLAMGTAAGSVLIYSTAKGALHCTLDGGHSG
GVNCVQWHPEDSLLYSGSDDTNIIEWDLQTGKARSKWKADRAAVTSLCVSPDGKLLLSAG
QIIKMWDLDTKEVYRKFTGHSAAVTTLRFATTRPPDSNGLYFLSGAAHERLLSVWQVRED
GKDKNSVVSFTLTDEPKHIDLVASNSKEEAVRLAVVCKDGQLHLFEHFLNGPCKKPFSPL
CTVQMSDTKDSPAPIPLLAAALRADARSVLLAYGNHLQPVMEKVEINTAERHVCLTRDVQ
TNLSLSMESTVSKVKTPIVNAKSRVLVPGLPGHQAPVKGTSQGSEKRKKDMDTKEMSIAE
RLGEIDLSIVSTEKGAPKGTASLQTDNFAVLLVQGLESKDANILNKVFQTRKEMVIKKTV
ARLPLPAVLPLVEEITNRLQGHPFTAVLMVRWLKAVLMHHTSYLASLPDLVTQLGVLYHM
IESRVKMFHKLTKLHGKLYLLMTQVATSDSSNTVTDVDHTAKLVYEEESSDEDEASGDEG
LPDDDDDDDSDNWEEEEVMEDKEEPADEENDDPDSRTDSKANGEEDMEHGNESEEE
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggcggccgatgctgggagcgctacgctgcagctaccttgcgttttttcaccaaaatca
cgacagtacttagcattgtgtgcccaggacggcagacttcgcatttggaacacagatagt
aaaacacttcaacaagaatatgtgccttcagcccatttgagtgccacttgtatctgcata
gcatggggaccatgtcggacagtcaaggaggggcctcagaggaagaagaggaaatcggag
gcagggcaggtggaggagaaggcagacctgttggcgatgggcacagcagcgggcagtgtg
ctcatctacagtacagcaaagggagcactgcactgtaccctggatggaggccatagtgga
ggagtgaattgtgtccagtggcaccctgaagacagtttattatacagcggctcagatgat
acaaacattatagagtgggacctgcagacaggcaaggcacgaagtaagtggaaggcggac
cgtgcagctgtgaccagtttgtgtgtgagccctgatggcaaactgctgctctcagctggt
cagataatcaagatgtgggacttggacaccaaggaagtttacaggaagttcacaggccat
tccgcggctgtgacgaccctgcgctttgccaccactcgacctccggacagcaatggtctt
tatttcctgtctggcgctgcacatgaacgactgctcagtgtttggcaagtacgagaagat
ggaaaggacaagaattcagtggtgtccttcacactgacggacgagccaaaacacatcgac
cttgtcgcgtccaacagcaaggaagaggcggtgaggctggcagtggtgtgtaaggatggg
cagctgcatctctttgagcactttttaaatgggccctgtaagaagccgttttcacccttg
tgtacggtgcagatgtcagacacaaaggactccccagcaccgatcccactgctggctgct
gccctcagagctgatgcacggtctgtgctgctggcctacggcaaccacctacagcctgtg
atggagaaagtagagatcaacacagcagagagacatgtctgtttgacccgggatgttcag
accaacttgtccctttccatggagtccaccgtttccaaggtcaaaacccctattgtcaac
gccaagagcagagtcttggtcccaggacttcctggtcaccaagccccagtcaagggaacc
tcacagggatcagagaagaggaaaaaagacatggacaccaaagagatgtcaatagcggag
cgactgggtgaaatcgatctctctatagtctccaccgagaagggtgctcctaaagggacg
gcctctttacaaacggacaattttgcagttctgctggtgcagggcctggagagcaaagat
gccaacatcctaaataaagtttttcagactcgtaaagagatggtgataaagaaaacggtt
gctcggttacccctccctgctgttttacctttggtggaagagatcacaaatagactccag
gggcacccttttacggcagttttaatggtacggtggctcaaggctgtgctcatgcaccac
acatcatacctggcatcgctgcccgacctggttacccagctgggagtgctttatcacatg
attgagagcagagtgaagatgttccacaagctaacaaagctgcatggaaaactgtatctc
ctaatgacacaggtggcgacaagtgacagcagcaacacagttacagatgttgaccacaca
gctaagctggtgtatgaagaagaatcatctgatgaagatgaggcctctggtgacgaaggt
cttcctgatgatgatgatgatgacgactctgataactgggaggaggaggaggtgatggaa
gacaaggaggaaccagcagacgaggaaaacgatgatccagacagcagaacagattccaaa
gcaaacggagaggaggacatggagcacggaaatgagagcgaagaggagtga

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