Perca fluviatilis (European perch): 120550961
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Entry
120550961 CDS
T11622
Name
(RefSeq) transcription factor Sox-9-A-like
KO
K18435
transcription factor SOX9 (SOX group E)
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pflt03000
]
120550961
Transcription factors [BR:
pflt03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG SOX
120550961
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HMG_box
Sox_N
HMG_box_2
HMG_WDHD1
Peptidase_C58
Motif
Other DBs
NCBI-GeneID:
120550961
NCBI-ProteinID:
XP_039643910
LinkDB
All DBs
Position
21:22628584..22631351
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AA seq
496 aa
AA seq
DB search
MNLLDPYLKMTEEQDKCLSDAPSPSMSEDSAGSPCPSVSGSDTENTRPSENGLLGVDGEF
KKDEDDKFPACIRDAVSQVLKGYDWTLVPMPVRVNGSSKNKPHVKRPMNAFMVWAQAARR
KLADQYPHLHNAELSKTLGKLWRLLNEGEKRPFVEEAERLRVQHKKDHPDYKYQPRRRKS
VKNGQSESEDGSEQTHISPNAIFKALQQADSPASSMGEVHSPGEHSGSQGPPTPPTTPKT
DISSGKMDLKREGGLRSLPEGPGGRQLNIDFRDVDIGELSSDVISHIETFDVNEFDQYLP
PNGHPGVAGNPAPVTYAGSYSISGGAPVSPQTGAAAAWLAKSQNQPGQQQQHTLTPLGGA
GNSEATQAQHRTQIKTEQLSPSHYTEQQQGSPQHAAYSPFSLQHYSPPQPSSYPAISRAQ
QYDYSDHQGGAAAASYYSHAGAGQGSGLYSTFSYMSSGSQRPMYTPIADNAGVPSIPQSS
PQHWEQAPVYTQLTRP
NT seq
1491 nt
NT seq
+upstream
nt +downstream
nt
atgaatctcctcgacccttacctgaagatgacggaggaacaagacaagtgtctgtccgac
gccccgagcccgagcatgtccgaagactccgcgggctccccgtgcccgtccgtgtcgggc
tcggacaccgagaacacccggccgtcggagaacgggctgctcggcgtggacggagagttc
aagaaggacgaggatgataagttccccgcgtgcatccgcgacgcggtgtcccaggtgctc
aagggctacgactggaccctcgtgcctatgcccgtgcgcgttaacggatcttctaagaac
aagcctcacgtgaagagaccgatgaatgccttcatggtgtgggctcaggcggcgcggagg
aagctggcggatcagtacccacacctgcacaacgcggagctcagcaagactctggggaaa
ctctggagacttctcaacgaaggggagaagcggccgtttgtggaggaggctgagcggctc
cgggtgcagcacaagaaggatcacccggactacaaataccagccccggcggaggaagtcg
gtgaagaacgggcagagcgagtcagaggacggcagcgagcagacgcacatttcccccaat
gccatcttcaaagccctgcagcaggcggactccccggcctccagcatgggagaggtgcac
tctccgggcgagcactcaggctcccaggggccccctactccccccaccaccccgaagaca
gacatcagctcaggcaaaatggacctgaagcgtgaaggcggcctccgctctctgcccgag
ggccccggcgggcgccagctcaacatcgacttccgcgacgtggacatcggcgagctgagc
agcgacgtcatctcccacatcgagacctttgacgtcaacgagttcgaccagtacctgccg
cccaacgggcaccccggcgtcgctggcaaccccgcgccggtcacctacgccggcagctac
agcatcagtggcggcgcgccagtcagcccgcagacgggagcggccgcagcgtggttggct
aaaagccagaaccagccggggcagcagcagcagcacactctgaccccgctggggggcgca
ggcaactcagaggcaactcaggcccagcaccggacccagatcaagacggagcagctgagc
ccgagccactacaccgagcagcagcagggctcgccgcagcacgccgcctacagccccttc
agcctgcagcactacagccccccccagccttcctcctacccggccatctccagggcgcag
cagtacgactactccgaccaccaggggggcgccgccgccgcgtcctactacagccacgcg
ggggcggggcagggctcggggctctactcgactttcagctacatgagcagcggcagccag
aggcccatgtacacgcccatcgccgacaacgccggggtgccctccattcctcagagcagc
ccgcagcactgggagcaggcgccggtttacacccagctcaccagaccctga
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