Perca fluviatilis (European perch): 120554355
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Entry
120554355 CDS
T11622
Symbol
vps16
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog isoform X1
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04140
Autophagy - animal
pflt04142
Lysosome biogenesis
pflt04148
Efferocytosis
pflt05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome biogenesis
120554355 (vps16)
04140 Autophagy - animal
120554355 (vps16)
04148 Efferocytosis
120554355 (vps16)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
120554355 (vps16)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflt04131
]
120554355 (vps16)
Membrane trafficking [BR:
pflt04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
120554355 (vps16)
Hops complex
120554355 (vps16)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
CC1_STRIPAK
Motif
Other DBs
NCBI-GeneID:
120554355
NCBI-ProteinID:
XP_039649135
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All DBs
Position
24:complement(20853565..>20867800)
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AA seq
834 aa
AA seq
DB search
MAFITANWNPLGEAFYRKTELYEMCWNLRDGLRDSLVAAAPYGGPIALLREPLRRSPSSR
PQLEIYSASGVSIASFPWKSGPVVQLGWTVSDELLCIQEDGSVLIYDLFGSFKRHFSMGQ
EVMHSQVLEAKVFHSPYGTGVAIVTASSRFTLATNIDDLKLRRLPEVPGLQGKPTSWVVL
SQDRQTKVLMSNGPELYILDNTSCTAVVPPGLGPQAGSIVHMAVSFSYKYLSLFTDTGHL
WTGLSNLQDKLSEVDTKKTTPPKQMVWCRRPRSQQPSVVLMWDRLLMVVGVSQDTIQFPL
EDPCVLIGELDGVRIISSANQELLQEVPLVCQDIFKIASMAPGALLLEAHREYQKSSQKA
DEYLREIKEQSMLGEAVRQCVEAAGHEYDSNTQKSLLRAASFGKCFLTDFSPDAFVSTCR
ELRVLNAVRERGVGLPLTHTQFKQLTLQVLIDRLVYRQFYPLAIEVCRYLKIPDYQGVSR
VLKHWASCKVQQKDLSDEAIARAVCVKVGDSPGVSYSDIAAKAYECGRTELAIKLLDSEA
RSGEQVPLLLKMKKSQLALSKAVESGDTDLVYTVVTYLKNEMNRGDFFMTLRNQPVALSL
YRQFCKLQEQETLKDLYNQDDDHQELANYYVTASYREKRLDSRLSLLQSAVDEYNKAKNE
FSAKATEEEMRLLRIQRKLDEEKGAGLLGLSLQATIEALLALGLHKQAEQLYRDFRVPDK
RFWWLKLKSLAEKEEWEELEKFSKSKKSPIGYLAFVEVCMKSNNKHEAKKYVSKVTPEQR
VKAHLAVGDLEGAADAAIERKSDSELAAVLAKCPASDRQLVDRLNRAAATAAKK
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
gcggcctcctttgggaagtgtttcctgactgacttcagtcctgatgcgttcgtgtcgacc
tgcagagaactcagagtcctgaacgctgtcagagagagaggagtcggactgcctctcaca
cacacccaattcaaacagttgaccctacaggttctcatcgacaggttggtgtatcggcag
ttctatccgttagcgatagaggtgtgtcggtacctgaagatcccagactatcagggagtc
agcagagtcctcaaacactgggcttcctgcaaggtgcagcagaaggacctatcagacgag
gccattgcccgagcagtgtgtgtgaaggtgggagactcgcctggtgtttcctactcggac
atcgccgctaaagcttacgaatgtggacgcaccgagctcgccatcaagctgttggactct
gaggctcggtccggggagcaggtccctctgctgctgaagatgaagaagagtcagctggcg
ctcagcaaagctgtggagagtggagacacagacctcgtgtacaccgtggtgacgtatctg
aagaacgagatgaacagaggagacttcttcatgactctgaggaaccaaccggtcgctctc
agcctctacagacagttctgtaagctgcaggaacaggaaactctgaaggacctttataac
caggacgatgatcaccaggaactggccaattactacgttacagctagttacagagaaaag
aggttagatagccgtctgtctctcctgcagtctgctgtggatgaatacaacaaggccaag
aacgagttctctgcaaaggctacggaggaagagatgcgtctcctacgtatccaacgcaaa
ctggacgaagaaaagggggcggggcttctgggactgtctctgcaggcgaccatagaggct
ctgctggcgttgggactccacaaacaggcggagcagctttaccgagacttcagagttcct
gacaagaggttttggtggctgaagctgaagtctctggcggagaaagaggagtgggaggag
ttagagaagttctcaaagagcaagaagtctcccattggctacctggcgtttgtcgaggtc
tgcatgaagagcaacaacaagcacgaagccaagaagtacgtttccaaggttacgccggag
cagagggtcaaagcccacctggccgtcggagacctggagggcgctgcggacgccgccatc
gagcgtaagagcgactccgagctcgccgctgtcctcgccaaatgccccgcctccgaccgc
cagctggtcgaccggctgaaccgcgccgccgccacggctgccaaaaagtga
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