Perca fluviatilis (European perch): 120555842
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Entry
120555842 CDS
T11622
Symbol
zgc:136908
Name
(RefSeq) zgc:136908 isoform X1
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
pflt
Perca fluviatilis (European perch)
Pathway
pflt04137
Mitophagy - animal
pflt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120555842 (zgc:136908)
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120555842 (zgc:136908)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflt03019
]
120555842 (zgc:136908)
03009 Ribosome biogenesis [BR:
pflt03009
]
120555842 (zgc:136908)
04131 Membrane trafficking [BR:
pflt04131
]
120555842 (zgc:136908)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pflt04147
]
120555842 (zgc:136908)
Messenger RNA biogenesis [BR:
pflt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
120555842 (zgc:136908)
Ribosome biogenesis [BR:
pflt03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
120555842 (zgc:136908)
Membrane trafficking [BR:
pflt04131
]
SNARE
SNARE associated proteins
Others
120555842 (zgc:136908)
Autophagy
Aggrephagy
Other aggrephagy associated proteins
120555842 (zgc:136908)
Exosome [BR:
pflt04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
120555842 (zgc:136908)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
CDC48_2
AAA_5
AAA_33
AAA_2
AAA_22
TIP49
Vps4_C
AAA_14
RNA_helicase
NPHP3_N
AAA_28
ATPase_2
Parvo_NS1
Mg_chelatase
DUF815
nSTAND3
AAA_7
ATPase
AAA_18
ABC_tran
AAA_17
nSTAND_NTPase5
NACHT
NB-ARC
ResIII
Viral_helicase1
Sigma54_activat
AAA_24
PhoH
SLFN-g3_helicase
Zot
Motif
Other DBs
NCBI-GeneID:
120555842
NCBI-ProteinID:
XP_039650916
LinkDB
All DBs
Position
1:18525006..18535327
Genome browser
AA seq
808 aa
AA seq
DB search
MPGSGGADPKGEDFSTAILKQKHRPNRLIVDEALNEDSSIVSLSLIKTEELQLFRGDTVV
LRGRKCRQTVCIVLTDETCGHERIRMTRVTRNNLRVRLGDVISIHACPDIKYGKQIHVLP
IDDTIEGLTGNLFDVFLKPYFLEAYRPIHKGDIFLVRGSMRAVEFKVVETDPSPHCIVAP
DTVIYCEGEPIKREDEEESLNDIGYDDIGGCRKQLAQIKEMVELPLRHPGLFKAIGVKPP
RGILLYGPAGTGKTLVARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEAEKNAP
AIIFIDELDAIAPKREKTHGEVERRIVSQLLTLMDGLKQRAHVVVMAATNRPNSVDPALR
RFGRFDREIDIGIPDSTGRLEIMQIHTKNMKLAGDIDLERIAKETHGHVGADLAALCSEA
ALQAIRKKMTLIDLEDESIDADLLNSLAVTMDDFQWALSQSNPSALRETVAEVPQVNWED
VGGLDQVKRELQELVQYPVEYPDKFLKFGMTPSRGVLFYGPPGCGKTLLAKAIANECQAN
FISIKGPEMLTMWFGESEANVRDVFDKARQAAPCILFFDELDSIAKSRGGGGGDGSGAAD
RVINQILTEMDGMSDKKNVFIIGATNRPDIIDSAILRPGRLDQLIYIPLPDKPSRTAILN
ANLRKSPVARDVDLDYLSDITDGFSGADLTEICQRACKMAIREAIEAEIKAERQRQTRPG
IPMDEDFDPVPEIRKDHFEEAMRFARRSVSDNDIRKYEMFAQTLQQSRGFGNFRFPSATG
TRSGGQGSGSGSERPGVYREEGNDDLYQ
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
atgccaggctctggaggagcagacccaaagggagaagatttctccactgccatcctgaaa
cagaaacacagaccgaacagactcattgtggacgaagctctcaatgaagacagcagcatt
gtcagcctgtcactgattaagacagaggagctgcagctcttccggggggacacggtggtg
ttgcgagggaggaaatgtcgccaaacagtgtgcatcgtcctgacagatgaaacctgtggg
catgagcgaatccgcatgactcgtgtgacgcgcaacaatctgcgtgtccggcttggtgat
gtcatcagtattcatgcctgccctgatatcaagtatgggaagcagatccatgtcctccct
atagatgacaccatcgagggccttacaggaaacctctttgatgttttcctcaaaccgtat
tttctggaggcttaccggcccatacataaaggtgacatcttcttggtgagaggaagcatg
cgggcggtggagttcaaggtggtggagactgaccccagcccccactgcattgttgcccca
gacacggtcatctactgcgagggcgagccaatcaaaagagaggatgaggaggagagcctt
aatgacatcggctacgacgacatcggaggctgtcggaagcagctggcccagattaaagag
atggtggagcttcctctcagacaccccggccttttcaaggctatcggtgttaagcccccc
agaggaatcctgctgtacggccctgcaggcacagggaagaccctggtggcccgggctgta
gccaacgaaactggtgcctttttctttctcatcaatggtccggagatcatgagtaagctg
gcgggagagtcagagagcaacctaagaaaggcatttgaggaggcagagaaaaacgctcca
gccatcatctttattgatgagctggatgccattgctcccaagagagagaagacccatggt
gaagtggagaggcgtatagtctcccagctcctgaccctgatggatggcctgaagcaaaga
gctcatgtagttgtcatggcagccacaaaccgaccaaacagtgtggaccctgctctgaga
cgctttggcaggtttgaccgggagattgatattggaatccctgattcgacaggcagactg
gagatcatgcagatccacaccaaaaacatgaaactggctggcgacatcgacctggagagg
attgccaaagagacccatggtcatgtaggcgccgacctggctgctctgtgctcagaagct
gctctgcaagccatccgcaagaagatgaccctcatagacctggaggacgaatccattgat
gctgacctgctcaactcactggctgtcaccatggatgacttccaatgggcgctgagtcag
agcaacccatcagctttgagagagactgttgcagaggtgcctcaggtgaactgggaggat
gtcggaggactggaccaggtcaagagagaactgcaagagctcgttcagtaccctgtcgag
tatccggacaagttcctgaagtttggtatgactccatctcgtggagtgttgttctacggc
cctccgggctgtgggaaaaccctgctggctaaggccatcgccaacgagtgccaagcaaac
tttatctccatcaaaggacccgagatgctgaccatgtggtttggagaatcggaggccaat
gtcagagatgtgtttgataaggccagacaggcagccccttgcatcttgtttttcgacgag
ttagactccattgccaaatctagaggaggcggaggtggggatgggagtggtgcagctgac
agagtcatcaatcagatactcacagagatggacggcatgtcggacaaaaagaatgtcttc
attattggagccacaaacagaccagacatcatagactctgccatcctgcggccgggccgt
ttggaccagctcatctacatcccgctcccagacaaaccatctcgcactgcaatcctaaat
gccaacctccgcaagtcccctgtcgcacgagatgttgatctggactacctgtctgacatc
acagatgggttctctggagctgacctgacagagatctgccaacgggcttgtaaaatggcc
atccgtgaggccatcgaggccgagatcaaggctgagcgtcagaggcaaaccagaccaggc
atccccatggatgaggactttgatccagtcccagagatcaggaaggaccactttgaagag
gcgatgcgatttgctcgtcgctctgtcagtgacaatgacatccgcaaatatgaaatgttt
gctcaaactctgcagcagagccgaggttttggaaacttcaggttcccctctgctactggt
acccggtctggaggtcaggggtcaggctctgggtcagagaggccaggcgtgtacagagag
gaaggcaatgatgatctctatcagtga
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integrated database retrieval system
