Perca fluviatilis (European perch): 120556015
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Entry
120556015 CDS
T11622
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04137
Mitophagy - animal
pflt04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
120556015
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
120556015
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pflt04121
]
120556015
Enzymes [BR:
pflt01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
120556015
Ubiquitin system [BR:
pflt04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
120556015
Multi subunit type E3
ERAD complex
120556015
LMBR1L-GP78-UBAC2 complex
120556015
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
G2BR
zf-RING_2
CUE
zf-C3HC4_2
zf-C3HC4
zf-C3HC4_3
zf-RING_UBOX
zf-rbx1
zf-RING_11
zf-ANAPC11
zf-RING_5
zf-RING_16
Prok-RING_4
zf-RING_Vps41
zf_RING_Vps8
RING_XB3-XBAT31
zf-C3HC4_4
zf_RING_Vps8_fungal
SVIP
Motif
Other DBs
NCBI-GeneID:
120556015
NCBI-ProteinID:
XP_039651237
LinkDB
All DBs
Position
3:complement(32763628..32773722)
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AA seq
622 aa
AA seq
DB search
MPLLFLERFPWPSLQTYTALSVALLAGSIFSAYTTVTDPGFGVLENDETPSPSEGEHIEH
LNNDIGDTELSVLWYLATDSLFVWVLVNTFCCSLMLTAKMIQYVVFGPLRVSEKQHLKDK
FWNFIFYKFIFIFGVLNVQTVEEVVMWCLWFSALVFLHLMVQLCKDRFEYLSFSPSTPMN
SHVRVLCLLVSLLLDCCGLAVGCGLLGASHGMHTLSFMAAECLLVTVRTGHVIMRYSIHL
WDLNHPGTWESKGTYVYYTDFIMELAMLFLDLMHHIHMLLFGNIWLSMASLVIFMQLRYL
FHEVQRRVRRHKNYLRVINNMEARFAVATAEELAANDDDCAICWDTMLTARKLPCGHLFH
NSCLRSWLEQDTSCPTCRTSLNINGDGGQARGPQQGGGLEDNIGPVGAAPDARPHINQHN
HFFHFDGSRIASWLPSFSVEVMHTTNILGIAQANNSQLMAMAHQIQEMFPQVPSYLVMQD
LQLTRSVEVTTDNILEGRIQVPFPTQAIEHAPTQVSTGPDEQEGSSGAAEQGLSETDSME
IRGGRFSKSAEERQKMLKQRKEEILQQARRRYLNKSPEDQEDEDLPGLEEDIVPDLNLTV
LRRRTMAAAAERRMQNQQDPAP
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgcctctgctgtttttggagaggtttccttggcccagcctgcagacctacacagcactg
agtgtggctttgcttgctggcagcatctttagtgcctacaccactgtgactgatccaggc
tttggggtcttggaaaatgatgaaacaccttctccctctgaaggggaacatattgaacat
ctaaacaatgatattggtgacacagaattgtcagtcctgtggtatcttgccactgacagt
ctctttgtatgggtcttggtcaacacattctgctgctctttgatgttaactgctaaaatg
attcagtatgtggtgtttggcccgctcagggtcagtgagaagcagcatctgaaagataag
ttctggaatttcatcttctacaagttcattttcatctttggcgtattgaacgttcagaca
gtggaggaggtggtcatgtggtgtttgtggttctctgccctggtctttctccacctcatg
gtacagctctgcaaagaccgatttgaatatctgtctttctcgccctccactcccatgaac
agccatgtacgagtgctttgtctgctggtctccctgctgctggactgctgtggtctggct
gtgggctgtggtctgctgggagcttctcatggcatgcataccctctcctttatggcagca
gagtgtctgttggtgactgtacgcactgggcatgtcatcatgcgatattccattcatctg
tgggatctgaaccatccagggacctgggagagtaagggaacatatgtctattacacagac
ttcatcatggagctggctatgctcttcctggacctcatgcaccatatccatatgctgctt
tttggaaacatctggctgtccatggcaagcttggttatcttcatgcagctgcggtatctc
ttccatgaggtccaacgccgtgtccgccgacacaagaactaccttcgtgtcatcaacaac
atggaggccagatttgcagttgctactgcagaggagctggcagctaatgatgatgattgt
gccatctgctgggatactatgttgacagcacgcaaactaccctgtggccatctcttccac
aactcttgtttgcgctcatggctggagcaggacacctcatgtccaacatgtcggacatcg
ctgaacattaatggggacgggggccaggcgagaggaccgcagcagggcgggggcttggaa
gacaacatcggcccagtaggagctgccccagatgctagaccacatatcaaccaacacaat
cacttcttccactttgatggatctcgcattgccagctggctgcccagtttctcagtggaa
gtaatgcacaccaccaatatcttgggcattgctcaggccaacaactcccagctcatggcc
atggcccatcagatccaggagatgttccctcaggtgccctcctatctggtgatgcaggat
ctgcagttgactcgctctgtggaggtcaccactgacaacatcctggagggacgcatccag
gtgcctttcccgacgcaggccatagagcatgccccgacacaggtgagcactgggccagat
gagcaggaagggtccagtggagcagctgaacagggcctcagcgagacagacagcatggag
atcagaggaggtcgcttctctaagtcggctgaggagaggcagaagatgttaaagcagagg
aaagaagagattctacagcaggcacgcaggagatatctgaacaaaagtccagaggaccag
gaggatgaggatttgccgggactggaggaggacattgttccagatttgaacttgactgtg
cttagacgtagaaccatggcggcagctgcagagagacgcatgcaaaatcaacaagaccct
gcaccctga
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