Perca fluviatilis (European perch): 120557218
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Entry
120557218 CDS
T11622
Name
(RefSeq) RNA-binding protein 39-like isoform X1
KO
K13091
RNA-binding protein 23/39
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflt03041
]
120557218
Spliceosome [BR:
pflt03041
]
Common components
Common spliceosomal components
General mRNP proteins
120557218
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_1
RBM39linker
RRM_MUD2_C
RRM_5
RRM_occluded
RBD_DEAH11
RRM_7
RRM_8
Motif
Other DBs
NCBI-GeneID:
120557218
NCBI-ProteinID:
XP_039653270
LinkDB
All DBs
Position
4:44500044..44510159
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AA seq
495 aa
AA seq
DB search
MADDLDIEEMLDAPYRKDEPKNLSPNGEEERTKKKKRSRSRDKKRSRSRDRKRSRSRERK
RSRSRDKRRSRSRERRGSRERGGRYRDHHKHRRRSKSKSPVRKEKSPVRLPVDTLTPEER
DARTVFCMQLAARIRPRDLEDFFSAVGNVRDVRMISDRNSRKSKGIAYIEFVEATSVPLA
IGLTGQRLLGVPIIVQASQAEKNRAAAAAAANSLQKGSAGPMRLYVGSLHFNITEEMLRG
IFEPFGRIESIQLMMDSATGTSKGYGFITFSDADCAQKAMEQLNGFELAGRPMKVGNVTE
RTDSSASFLDSDDLERSGIDLGTTGRLQLMARLAEGSGLQMPPAAQQALQMSGVIAIGAM
AAVSAAMNPGLNMNSGAMNLPSQPLATHCFQLSNMFHPNSEKPPGWEVDIQHDVIEECNK
HGGVVHVYVDKNSAQGNVYVKCPSIPAAMAAVNALHGRFFAGKMITAAFVPLPAYHHLFP
ESATASQLLVPPTRR
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atggcagatgacctggacattgaagagatgctggatgctccctacaggaaggatgaaccc
aagaacctgagccccaacggagaggaggaacgaaccaagaagaagaagcgcagccgcagc
cgtgacaagaagcgcagccggagtcgagacaggaagcgcagccgcagcagagagcgtaaa
cgcagccgcagccgagacaagagaagaagtcgcagcagagagcgccgcggcagtagagag
aggggcggccgctaccgagaccaccacaagcaccggcggcggtccaagagtaagagtccc
gtgaggaaggagaagagtcccgtcaggctccccgtagatacgctgactccagaggagcgg
gacgcccgcaccgtgttctgcatgcagctggcggccaggatccgccccagagacctggag
gacttcttctccgctgtggggaacgttcgggatgtgaggatgatctctgacaggaactcg
cgcaagtcgaagggcatcgcctacatcgagtttgtggaggcaacatcagttcctctcgcc
atcgggctgacggggcaaaggctgctgggagttcccatcatcgtacaggcctcacaggcg
gagaagaacagagcggctgcagcagctgctgccaacagcctgcagaagggatctgcggga
ccgatgaggctttacgtcggctctctgcacttcaacatcaccgaggagatgctgagagga
atctttgagccatttggacggattgagagcatccaactgatgatggacagtgccacggga
acctctaaaggttacggcttcatcactttttcagacgccgactgtgcccagaaagcgatg
gagcagctgaacggctttgagctggcgggtcggccgatgaaagttggaaacgtgacggag
cggaccgactcctcggcctcgttcctcgacagcgacgatctggaacgctccggcatcgac
cttgggaccaccggacgcctgcagctgatggcccggctcgctgagggttcaggtctacag
atgcctccagctgcccagcaggctctgcagatgagtggagtgatcgctatcggagccatg
gctgctgtgtcagctgcgatgaatccgggtctcaacatgaactctggtgcgatgaatctt
ccctctcagccgctcgctacacactgcttccagctctccaacatgttccaccccaacagt
gagaagcctcctggctgggaggtggatatacagcatgatgtcatcgaggaatgtaacaaa
catggaggagtcgtccacgtctacgtcgacaaaaactctgcacagggaaacgtttacgtt
aagtgtccgtcgatccctgccgccatggccgccgtcaacgctctgcacggccgattcttt
gccgggaagatgatcacggcggcgttcgtccctctgccggcctaccaccacctcttcccg
gagtctgccacagccagtcagctgctggtcccgcccactcggcggtga
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