Perca fluviatilis (European perch): 120558510
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Entry
120558510 CDS
T11622
Symbol
scn8aa
Name
(RefSeq) sodium channel, voltage gated, type VIII, alpha subunit a
KO
K04840
voltage-gated sodium channel type VIII alpha
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
120558510 (scn8aa)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflt04040
]
120558510 (scn8aa)
Ion channels [BR:
pflt04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
120558510 (scn8aa)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
Na_trans_cytopl
PKD_channel
IQ_SCN5A_C
FraC
GPHH
HpsJ
Lustrin_cystein
Motif
Other DBs
NCBI-GeneID:
120558510
NCBI-ProteinID:
XP_039655466
LinkDB
All DBs
Position
5:complement(22341425..22388204)
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AA seq
1960 aa
AA seq
DB search
MAAPLIAPPGPDSFKKFTLESLVTLELRINEEKNKKPPKQDSSYRDDDDENKPKPNSDLE
AGKSLPYIYGDIPKGLVAVPLEDLDPYYLKSQKTFIVLNRGKTIFRFSATPALYFISPLN
PVRRVAIKILIHALFSMIIMFTILTNCIFMTFSDPPEWSKQVEYTFTGIYTFESLVKITA
RGFCIDGFTFLRDPWNWLDFMVISMAYITEFVDLGNVSALRTFRVLRALKTISVIPGLKT
IVGALIQSVKKLSDVMILTVFCLSVFALIGLQLFMGNLRHKCVIWPINTTKAIDWNEYIM
NETNFYFLPGQLDALLCGNSSDSGRCPEGYTCMKAGRNPNYGYTSFDSFGWAFLALFRLM
TQDFWENLYMLTLRAAGKTYMIFFVLVIFVGSFYLVNLILAVVAMAYEEQNQATMEEALQ
KEEEFKAMLDQLKKQQEDAQAAAMATSAGTVSEDAVEDDGGGHLSCSSSEMSKLSSKSAK
ERRNRKKKWRQKEQEKEKGDSEKFVKSESDDGSKRSRFRFPDNRLGRKSSIMNQSLLSIP
GSPFLSRHNSKSSIFSFKGRGKDVGSENEFADDEHSTVEECEERRGSLFSPYRRSSYSGY
HGKRNSTVDCNGVVSLIGPGHGGRLLPEVKIDKAAPDDSPTTEVEVKKKLSGSLMVSVDQ
LNTSFGRKERANSVMSVITNTLVEELEESQRKCPPCWYKFSNTFLIWECSPLWIKIKETM
NLIVMDPFVDLAITICIVLNTLFMAMEHYPMTPDFEDMLSVGNLVFTGIFAGEMLFKLVA
MDPYYYFQEAWNCFDGFIVTLSLVELALADVEGLSVLRSFRLLRVFKLAKSWPTLNMLIK
IIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKSYKDCVCKISLDCELPRWHMNDFFHSF
LIVFRVLCGEWIETMWDCMEVGEDQVGIIYYALIKRWIGNAVVLNLFLALLLSSFSADNL
AATDDDGEPNNLQISVRRIKIGIAWIKAKVRILVASLLKKPQMEDEQKPLDDMYDKKLNC
IANHTGVDINRDLDYVKNGNGTTSGIGSSVGKYMIDEDHMSFIHNPNLTVCVPIAVGESD
FENLNTEDFSSESENENSKELDDTSSSEGSTIDIKPDVVEEVVVEPVEEYLEPEACWTDG
CVAKYKCCDVDISTGWWKRWWYLRKTCYLIVEHNWFETLIIFMILLSSGALAFEDVYIEQ
RKTIRIILEYADRVFTYIFILEMLLKWVAYGFVKYFTNAWCWLDFFIVDVSIVSLVANAL
GYSDLGPIKSLRTLRALRPLRALSRFEGMRVVVNALVGAIPSIMNVLLVCLIFWLIFSIM
GVNLFAGKYYYCFNQTSEEYFPVDVVNNKTQCEALMKQNYTEVRWKNVKINFDNVGAGYL
ALLQVATFKGWMDIMYAAVDSREVEDQPDYEVNIYMYIYFVVFIIFGSFFTLNLFIGVII
DNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPRPQNKVQGMVFDFVTQQVF
DISIMILICLNMVTMMVETDDQSDETENVLYWVNFIFIVVFTTEFLLKLFALRHYYFTNG
WNIFDVVVVILSIVGMFLADIIEKYFVSPTLFRVIRLARIGRILRLIKGAKGIRTLLFAL
MMSLPALFNIGLLLFLVMFIFSIFGMSNFGYVKHGAGIDDLYNFETFGNSMIILFMITTS
AGWDGLLLPILNYPPDCDPNLENPGTSVKGDCGNPSVGIFFFVMYIIISFLIVVNMYIAI
ILENFSVATEESADPLSEDDFETFYEIWEKFDPTASQFITFAKLSDFADALEHPLRVPKP
NTIELIAMDLPMVSGDRIHCLDILFAFTKRVLGDSGELDMLRQQMEERFVAANPSKVSYE
PITSTLRRKQEDVSARTIQNAYRIHLIRRGIIFKRRTFTNNKFENGGTNQEKKESTPSTA
SLPSYDSVTKPDKEKQDENKEDWARKEKDKNQKDEWESKC
NT seq
5883 nt
NT seq
+upstream
nt +downstream
nt
atggctgcaccccttattgcaccgccaggacctgatagcttcaagaagtttactttggaa
tctttggtgacacttgagctgcgcatcaatgaggagaagaacaagaagccacccaagcag
gacagcagctaccgtgatgatgatgacgagaacaagcccaagcccaacagcgacctggag
gctgggaagagcctaccctacatctacggggacatccctaagggattggtggcggtacca
ctggaagacttggacccatactacctaaagtctcagaaaacatttatagtgctaaataga
gggaagacaatcttccgttttagtgccacgcctgccttgtacttcataagtcctcttaat
ccggttaggcgagtagctattaaaattttgatacatgctcttttcagcatgatcattatg
tttactattttgaccaactgtatattcatgacctttagtgatcctcccgagtggtcaaaa
caagtagagtacacattcacgggaatttatacatttgagtctcttgttaaaatcacggca
cgaggattctgtatagacgggtttacattccttagagatccatggaactggctggatttc
atggtcatttcgatggcatatataacagagtttgtggacctgggcaatgtatctgcgctg
agaacattcagagttctccgagcattgaaaactatctctgtcattccaggactgaaaacc
atcgtgggcgccctgatccagtctgtgaagaagctttcggatgtgatgatcctgaccgtc
ttctgcctgagtgtctttgcccttattggtctccagcttttcatgggcaacctgcgccac
aagtgtgtgatctggccaatcaacaccaccaaggccatcgactggaatgagtacatcatg
aatgaaaccaatttctacttcctgcctggccagttggatgctcttctctgtgggaacagc
tccgactctggccgctgcccggagggctacacatgcatgaaagctgggaggaatccaaac
tacggctacaccagctttgacagcttcggatgggccttcctggctctcttccgactcatg
acacaggacttctgggaaaacctttacatgctgaccctgagggcggcagggaagacgtac
atgatcttctttgtgttggtgatctttgtgggctcgttctacttggtgaatctgatctta
gctgtggtggccatggcttatgaggagcagaaccaggccaccatggaagaggccctgcag
aaggaggaggaattcaaggccatgctggatcagctcaagaaacagcaggaagatgctcag
gcggctgcaatggcaacctctgcaggtactgtgtcagaggacgcagtagaggacgatgga
ggaggtcatctgtcatgcagttcctctgagatgtcaaagctcagctccaagagcgccaaa
gaacgacgtaatcgtaagaaaaagtggcggcagaaagagcaagagaaggagaaaggcgac
agtgagaagtttgtcaagtcagagtcagatgatggcagcaagaggagccgcttccgtttc
cctgataatcgcttgggtcgaaagtcttccattatgaaccagtccctcctcagtatacct
ggctcacctttcctgtcccgccacaacagcaagagcagcatcttcagttttaaggggcgc
ggtaaggatgtgggatcggagaacgagtttgccgatgatgaacacagcacggtggaggag
tgcgaggagcgccggggctccctcttcagcccttatcggcggagcagctacagtggatac
cacgggaagaggaacagcacggtggattgcaacggcgtggtgtcgctcatcggccctggg
cacggtggacgccttctgcctgaggtgaaaatagataaggcagcccctgacgacagtccg
actactgaggttgaggtgaagaagaagctgtcgggctccctgatggtgtctgtggaccag
ctcaatacctcctttgggcggaaagagcgggccaacagtgtcatgagcgtcattaccaac
acactagtggaggaactggaggagtctcaacgcaagtgtccgccatgctggtataaattt
tctaacacattcctgatctgggagtgctccccactgtggattaagatcaaggaaactatg
aacctgattgtcatggaccccttcgtggacttagccataaccatctgtatcgtcctcaac
accctcttcatggccatggagcactaccccatgacccctgactttgaagacatgctgtct
gtaggcaatctggtgttcacagggatctttgcaggggagatgctttttaagttggtggct
atggatccatactactacttccaggaggcctggaactgtttcgacggtttcattgtaacg
ctgagtttagtggagctggctctggctgacgttgagggcctgtctgtgctgcggtcattt
cgattgctgagagtgttcaagctggccaagtcatggcccaccctcaacatgctgatcaaa
atcatcggaaactcagtgggagccttggggaacctgactctggtgctggccatcatcgtc
ttcatctttgctgtggtgggcatgcagctgtttggcaagagctacaaagactgtgtgtgt
aaaatctctcttgactgtgagttgcctcgctggcacatgaatgacttcttccactccttc
ctgatcgtcttccgggtgctgtgcggtgaatggattgaaaccatgtgggactgcatggag
gtgggggaggaccaggtagggattatatattatgctctcataaaacgatggattggaaat
gctgtagtgttgaatctgttccttgccttgctgctgagctcattcagtgctgacaacttg
gctgcaacagatgacgacggagagcccaacaacctgcagatttccgtcaggcgtataaag
attggcattgcatggatcaaagcgaaggtgcgaatattggtggccagtctgttgaagaaa
ccacagatggaggacgagcagaagcctttagatgacatgtatgacaagaagctgaactgc
attgctaaccacaccggggtggacatcaaccgtgacctggactatgtcaagaatggtaat
ggcaccaccagtggtattggcagcagcgtgggcaagtatatgatcgatgaggatcacatg
tcattcatccacaacccaaacctgaccgtctgtgtgcccattgctgtgggagagtctgac
tttgagaaccttaacacggaggacttcagcagcgagtcggaaaatgagaacagcaaagag
ctggatgacaccagttcgtcggagggcagtaccatcgacatcaagccagatgtggtggag
gaggtggtggtagaaccggtggaggaatacttggaacccgaggcgtgttggacagatggt
tgtgtggccaagtataagtgctgtgacgttgacatttctacgggctggtggaagagatgg
tggtacctgagaaaaacctgctacctgattgtggagcacaactggtttgagaccctcatc
atcttcatgatcctcctcagtagcggtgccctggcctttgaggatgtgtacatcgagcag
aggaagaccattcggatcattttggagtacgccgacagggttttcacctacatcttcatc
ctggagatgttgctgaaatgggtcgcatacggttttgtcaagtatttcaccaatgcctgg
tgttggctggacttcttcattgtggatgtgtctatagtcagccttgtagctaatgcgctg
ggctactccgatctagggcccattaaatcactcaggacactaagggccttgagacccctc
agagccttgtcacgttttgaagggatgagggtggtagtcaacgccttggtgggtgccatc
ccttccattatgaatgtgttgctggtttgcctcatcttttggctgattttcagtatcatg
ggggtcaacttgtttgcgggcaagtactactactgtttcaatcagacatcagaggaatac
tttcctgtcgacgtggtcaacaacaagacccaatgtgaggccctcatgaaacaaaactat
accgaggtcaggtggaagaacgtcaagatcaactttgataatgtgggcgccggctacctg
gccctgctgcaagtggccacattcaaaggttggatggacattatgtatgcagctgtggat
tccagagaggtggaagaccagcccgactatgaagtcaatatctacatgtacatctacttt
gttgttttcatcatatttggctccttcttcaccctcaacctctttatcggtgtgatcatt
gacaacttcaaccagcagaagaaaaagtttggaggtcaggatatattcatgaccgaggaa
cagaaaaagtactacaatgccatgaaaaaactagggtccaaaaagccacaaaaacccatt
cctcgaccacagaacaaggtccaaggcatggtgttcgactttgtgacacagcaagtcttt
gacatctccatcatgattctaatctgtctcaacatggtcactatgatggtggaaacggac
gatcagtcagatgaaacggaaaacgtcctctactgggtcaacttcatctttattgtagtc
ttcaccaccgagttcttgctaaagcttttcgcccttcgccactattacttcaccaatggc
tggaatatctttgatgtggtggtggtcatcctgtctattgtcggtatgttcctggctgat
ataattgagaagtactttgtgtcacccaccctgttcagggtgatcaggttggctcgtatt
ggccgtatcctgcgtctgatcaaaggagctaagggcatccgcactttactctttgctctg
atgatgtcactgccagccctgttcaacattggcctactgctcttcctggtcatgttcatc
ttctccatcttcggcatgtctaactttggctatgtaaaacacggagcgggaattgatgac
ttgtacaactttgagacctttggcaacagcatgatcattctgttcatgatcaccacgtca
gctggatgggacggcttgctgctgccgatcctcaactacccaccagactgcgatcccaat
ttggagaaccctggtacatccgtgaagggtgactgcggtaacccatcagtgggaatcttc
ttttttgtcatgtatatcatcatttctttcctgattgtggtcaacatgtacattgccatc
atcctggagaacttcagtgtggccacagaggaaagtgctgatccactcagtgaggacgac
tttgagaccttctacgagatctgggagaagtttgaccccactgcctctcagttcattact
tttgccaagctctctgactttgccgacgcactggagcacccacttcgtgtgccaaagccc
aacactatagaactaattgccatggatttgcccatggtgagtggcgatcgcattcactgc
ctagacatcctgtttgccttcacaaagcgagtgctgggtgacagtggggagttggacatg
ctgaggcaacagatggaggagcgatttgtggcagccaacccctccaaggtgtcgtatgaa
cccatcacctccactcttcgccgcaaacaggaggatgtctctgccagaactatccagaat
gcctaccgcatccaccttattcgacgcggcatcatcttcaagcgtcgtacttttactaac
aataagtttgagaatggcgggaccaaccaagagaagaaggagagcactccatccacagcc
tctctcccctcctacgacagtgtgaccaaacctgacaaggagaaacaggatgaaaacaag
gaggactgggccaggaaagagaaggacaaaaaccaaaaagatgagtgggaatcaaagtgt
tag
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