KEGG   Perca fluviatilis (European perch): 120560347
Entry
120560347         CDS       T11622                                 
Symbol
sf3a1
Name
(RefSeq) splicing factor 3A subunit 1
  KO
K12825  splicing factor 3A subunit 1
Organism
pflt  Perca fluviatilis (European perch)
Pathway
pflt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pflt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120560347 (sf3a1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pflt03041]
    120560347 (sf3a1)
Spliceosome [BR:pflt03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    120560347 (sf3a1)
 Complex B
    120560347 (sf3a1)
 Complex C
   U2 SnRNP specific factors
    120560347 (sf3a1)
SSDB
Motif
Pfam: Surp PRP21_like_P ubiquitin Rad60-SLD Ubiquitin_2
Other DBs
NCBI-GeneID: 120560347
NCBI-ProteinID: XP_039658671
LinkDB
Position
6:complement(177874..183724)
AA seq 780 aa
MPPGPVQIVQPEPNNKSDAPAEETPATKPIVGIIYPPPEVRNIVDKTASFVARNGPEFEA
RIRQNEINNPKFNFLNPNDPYHAYYRHKVNEFKEGKALEPSAAVPKVMQQAMQQAQQLSQ
KVQVIQETVVPKEPPPEYEFIADPPSISAFDLDVVKLTAQFVARNGRQFLTQLMQKEQRN
YQFDFLRPQHSLFNYFTKLVEQYTKILIPPKGLLTKLKRESENPREVMDQVRYRVEWAKF
QERERKKEEEEREKERVAYAQIDWHDFVVVETVDFQPNEQGHFPPPTTPEELGARILIQE
RYEKYGESEEVEMEVESEDEDDDREARAEGQASQPDQDTQVQDMDEGSDDDDDGMKAPLP
PDNPMPPPLPPTPDQVIIRKDYDPKASKPQPSITTPDEYLISPITGEKIQASKMQEHMRI
GLLDPRWLEQRDRSIRERQTEDEVYAPGLDIESSLKQLAERRTDIFGVEETAIGKKIGEE
EIQKPEEKVTWDGHSGSMARTQQAAQANITLQEQIEAIHKAKGLVGEDDTKEKIGPSKPS
EIHHHPPMPSGMGMPKPNPPMNVPRPPHSVAPVRTTLLSAVPVMPRPPVAPVVRLGPGQV
IASMPPMIPAPRINVVPMPPSAPHMMAPRPPPMVVPSAFVPAPPVPQPPNSAPAPPSHPP
PPHDDEPVNKKMKTEDNLIPEDEFLRRNKGPVAVKVQVPNMQDKTEWKLNGQVLNFTVPL
TDQVSVIKVKIHEATGMAAGKQKLQYEGIFIKDSNSLAYYNMSNGSVIHLALKERGGRKK
NT seq 2343 nt   +upstreamnt  +downstreamnt
atgccgcctgggcctgttcaaatagttcagccggagcccaacaacaagagtgatgcaccc
gcagaagagaccccagccactaaacccatcgttggtatcatatatccacctcctgaggtc
cgaaacatagttgacaaaacagccagctttgttgccaggaatggacctgagtttgaagca
agaatccgtcagaatgagatcaacaatccaaagtttaatttcctcaaccctaatgacccc
taccatgcctactaccgtcacaaagtcaatgaatttaaggagggcaaagcgctggaacca
tctgcagcagtgcctaaagttatgcagcaggccatgcagcaggcccaacagctttctcaa
aaagtgcaggtgattcaagagacagttgtccccaaggaaccacctcctgagtacgagttc
attgcggatcccccatcgatctcagcatttgatctggatgttgtcaagctcactgcccag
tttgttgctcgcaatggtcgccagtttcttactcagctcatgcagaaagaacagaggaac
taccagtttgactttctgcggccacagcacagccttttcaactacttcaccaaactggtt
gaacagtacactaagattctgatccctcccaaaggccttctgaccaagctgaagagagaa
tctgagaatcctagagaggttatggaccaggtgaggtaccgtgttgagtgggcaaagttc
caggagcgtgagaggaagaaggaagaggaggaaagagagaaagaacgggtggcttatgcc
caaatcgactggcatgactttgtagtggttgagacggtggatttccagcccaacgaacaa
ggtcacttccccccacctaccacaccagaggagcttggcgctcgcatcctaatccaagag
cgctatgagaagtatggagagagtgaggaggtggagatggaggttgagagtgaggatgaa
gacgatgatcgggaggcccgggccgaaggccaggcctcacagcctgatcaagacacacaa
gtgcaggacatggatgagggatcagatgacgacgacgatggcatgaaggctccactgcca
ccagataaccctatgccacccccactgcccccaactccggaccaggttattattcgcaaa
gactacgatccaaaagcttccaagcctcagccctcaattacaactccagatgagtatctc
atctcgccaattactggcgagaagatccaagccagtaagatgcaagagcacatgcgcatt
ggtctgctggatccgcgctggctggagcaaagggaccgcagcatcagagagaggcagacc
gaagatgaagtctatgctcctggtttggatattgagagcagcttgaaacagctggctgag
aggcgtactgacatcttcggtgtggaagagacggccatcggtaagaagattggcgaagaa
gaaatccagaagccagaagagaaggttacttgggatggccactcgggaagcatggctcgt
acccagcaggccgcacaggccaacatcaccctgcaagagcagatcgaagccattcacaag
gccaaaggactggtgggagaggatgacactaaggagaaaattggcccaagcaagcccagt
gaaattcatcaccatcctcccatgccctctggaatgggtatgcctaaacccaatccccca
atgaacgtgcctcgtccaccccactctgtggcaccagtgcgcaccactctcctgtctgcc
gtacctgtaatgccaagaccacctgtggctcctgtggtgcgccttggaccaggacaagtt
atagcatcaatgcctcccatgattcctgctccccgcatcaatgtggtccccatgccacca
tcagcacctcacatgatggcccccagacctccgcccatggttgttccatctgcattcgtc
cctgcccctccagtcccacaacctccgaactctgctcctgcaccaccatcccacccaccc
ccacctcatgatgatgagccagtcaacaagaagatgaagacagaggacaaccttattcca
gaggacgagttccttcgtagaaataagggtcctgtggcagttaaagtacaggtccccaac
atgcaggacaagaccgaatggaagctgaacggccaagtgctgaatttcactgtcccactc
acagatcaggtgtctgttattaaagtcaaaatccatgaagctacaggaatggcagcaggg
aaacagaagttgcagtatgagggtatattcattaaagattccaactccctggcttattac
aacatgagcaacggttcggtcattcacttggcactgaaggagagaggtggaagaaagaag
tga

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