Perca fluviatilis (European perch): 120560407
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Entry
120560407 CDS
T11622
Name
(RefSeq) LOW QUALITY PROTEIN: tetratricopeptide repeat protein 28-like
KO
K24936
tetratricopeptide repeat protein 28
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pflt03037
]
120560407
Cilium and associated proteins [BR:
pflt03037
]
Motile cilia and associated proteins
Other motile cilia associated proteins
120560407
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
TPR_7
TPR_1
CHAT
TPR_2
TPR_8
TTC28_C
TPR_10
TPR_MalT
CFAP70_TPR_C
TPR_17
TPR_SusR
TPR_16
RPN7
TPR_11
DUF6340
TPR_14
TPR_NPHP3
TPR_BSK1_C
TPR_19
TPR_6
TPR_9
PUB
TPR_YpiA_C
HlyE
BTAD
Motif
Other DBs
NCBI-GeneID:
120560407
NCBI-ProteinID:
XP_039658806
LinkDB
All DBs
Position
6:complement(39449933..39841426)
Genome browser
AA seq
2495 aa
AA seq
DB search
MEKQATLKEKFSILSSRTAGRHLRCVSGDEGARFGLSKAEFMEKVQQSNEACQRGDFQAA
VYLYTDALRADPQNCILYSNRSAALLKLGQHQAALDDAGKACELNPKWPKAYFRQGVALQ
YLGRHADALAAFASGLAQDPKSLQLLVGMVEAAMKSPLRESLEPTYQQLQKMKLDKSPFV
VVSVIGQELLTASHHTASVVVLEAALKIGTCSLKLRGSVFSALSSAHWSLGNTEKSTGYM
QQDLEVAKTLGDQTGECRAHGNLGSAFFSKGNYREALTNHRNQLVLAMKLKDREAASMAL
SSLGHVYTAIGDYPNALASHKQCVLLAKQSKDQLSEARELGNMGAVYIAMGDFDNAVQCH
EQHLGIAKALENKREEARAYSNLGSAYHYHRNFDKAMSYHTHVLELAQELEEKSIEMRAY
AGLGHAARCMQDLERAKQYHEQQLSIAEGLKDRAAEGRASSNLGIIHQMKGDYETALKLH
KTHLAIAQELNDYAAQGRAYGNMGNAYNALGAFDQAVRYHRQELQISMEVNDRASQASTH
GNLAVAYQALGAHDRALQHYQNHLNIARELRDVQSEARALGNLGNFHCSRGEFPQAVPYY
EQYLRLSPDLQDMESEGKVCHNLGYAHYCLGNYQDAVKYYEQDLALAKDLHDKLSQAKAY
CNLGLAFKALGDFTKAEECQKYLLSLAQSLNNAQARFRALGNLGDIFVCKKDVTGAIQFY
EQQLALAHQVKERRMEACAYAALGATYRLVQKYDKALGYHTQELEVYQELGDVSGECKAH
GHLAAVYMALGKYAMAFKSYEEQLELGRRLKDPVVEAQVYGNMGITKMNVGVMEEAIGYL
EQQLATLQQLSGNEAVMDRGRAYGNLGDCYEALGDFEEAIKYYDQYLSVAQSLNRMQDQE
KAYSGLGNGHRAMGNLQQSLVCFEKRLVVAHELGECGGKAQAYGELGALHSQLGNYEQAI
SCLERQLAIARDTRDRLLEGDASCGLGAVYQSMGEYETALRCHQSDLEIAEEAGSPTRQA
RAYGNLGLTYESLGNYERAVVFQEQHLSVAAQTNDLAAKTLAYGSLGRTHHALQNYSQAV
MYLQEGASGAFAEQLVRREDEAKIRHRLGLSLWASGNLEEAQHQLYRASALFETIRHEAQ
HSTDYKLSLFDLQTSCYQALQRVLVSLGHHDEALAVAERGRTRAFADLLVERQTGQQDSD
PYTPVTVEHILDTVNSQRALVLYFSMAAGYLYSWLLAPGAGILKFHEVYLGEGVSDGGSD
FQEGGGSGGGGVVSGSSLEQHIASAREALGVESYYSRGCSSSETESEAGDLLDQQFEELN
NKLNSVTDPTGFLRMVSRNNLFNRSCQSMTSLFSNTMSPAKDGNSSLPRRSSNLGKPPLR
ALYDLLIAPMEGGLMHSSGPVGRHRQLVMVLEGELYLIPFALLKGSSSNEYLYERFSLIA
VPSIHGLGTSAKAHSRRPGPAPCGGVSMAAVVGNPRLPSPVMDRWLWGPMPSAEEEALMV
AELLGCQPLAGTAATKERVMSALTQAECAHFATHISWKLAALVLTPNPESVPGGAGANVG
VGTVGRGAGGRRGSSGRGRKGSIGSGYTIPESLHMQDDSSDVESICDSPPLQEFLLTAAD
ILDLRLPVKLVVLGSYQESSSKVTADGVVGLTRAFLAAGAQCALVSLWPVPVAASKVFVH
AFYTALLNGTKASAALADAMKTVQSSKQYSHPSNWAGYMLIGNDXHFRMKYSETFSQYKM
SQPKMRRYADDAALRWYLQVEKSLQRIQNGQRNSMYTSQQSVENKVGGVPGWQALLTAVG
FRLDSVGSGMPAAVFFPTADPGDRLQQCSTTLQSLLGLPPPALQALCKLITASEAGEQLI
NRAVKNMVAMLHQVLVQLQTGEKEQDFSLLPIQVSISVQLWRLPGCHEFLAALGFDLCEV
GQEEVVLKTGKLANRRTLHFALQSLLALFDSTELPKRLSLDSSSSLESLASAQSVSNPLP
TGYSSLPFSPPCLDSQASDAISVYSLSSVASSMSCVSKSECDFLGHRQRGGATAHYSVHK
HPHVPRSRSSPHGAAAAAAAVAAAATGARGEDEEYEGFSIISSEPLGSHCDSLPLPPGHS
QRHHRGGRGVVGGSSSGAGRGYTVSVSSRGSVSTPTSPVKTCLVPSPNSPFQKVKGKVSS
SDTGESDQSSTETDSTVKSQEEKTVPLDPQELAQKILEETQSHLRAVGSLQRAGPEGATA
GGTSARSSAFRSSETSAFSRPNSSAGGRAQSSPRPKPPSRSSSLQKISSGYNSPAISESS
QKEGSHPSPTLDSHAQFRLKYPSSPYSGHISRSPSNVSPSSGHQSPAGSAPSPALSYSST
GSACSTSADQVPDLDRLRRGVIDEKVQAIHNLKTFWANAAAQQQQHLGPVRAVHGGPGSL
ASAGRDVLSLLNLSPRRCSPNDTQDSLELRELGLQSLDRGGKNSSNGHHCSNARKVAPSP
TISTRSSPGARSIRLPAGNGYKFLSPGRFFPSSKC
NT seq
7488 nt
NT seq
+upstream
nt +downstream
nt
atggagaagcaagcgactctgaaagaaaagttttccatcttgagttctcggacagcgggc
agacatctccgctgtgtttctggagacgaaggagccaggtttggtctcagcaaagccgag
ttcatggagaaagtgcagcagagcaacgaggcgtgtcagcggggggacttccaggcggcc
gtttatttgtacactgatgccttgcgagcggacccacagaactgcatcctgtacagtaac
cggtcagcagcgcttctcaaacttggacaacaccaggcggcgctggacgatgctggaaaa
gcctgcgagctcaatcccaagtggcccaaggcatacttccgacagggtgttgcccttcag
taccttggccgccatgccgacgcactggccgccttcgcctccgggctggcccaagacccc
aagagcctgcagctgctggtgggcatggtagaagccgccatgaagtcgccgttacgagag
tctctggagcccacctatcagcagctgcaaaagatgaagctggacaaaagtccctttgtg
gtggtgtctgtgattggccaggagctgctgacagcgagccaccacaccgcctctgttgtg
gtgctcgaggccgctttgaagatcggcacgtgcagcctcaagctccgcggctcggtcttc
tcggccctcagcagcgcccactggtccctgggcaacacggagaagagcaccggctacatg
cagcaggacctggaggtcgccaagaccttaggtgaccaaacaggggaatgccgtgctcat
gggaatctgggctcggcattcttctccaagggaaactaccgcgaagcgctgaccaaccac
cgcaaccagctggttctggccatgaagctaaaggacagagaggctgcttccatggcgctg
agcagcttgggccatgtgtatacagccatcggggactacccgaacgccctggccagccac
aagcagtgtgtcctgctggccaagcagtccaaggatcagctgtctgaggcccgcgagctg
ggaaacatgggcgccgtctatattgccatgggagactttgacaacgccgtgcaatgccat
gagcagcacttaggcatcgccaaggccctggagaacaaacgagaggaagcccgggcgtac
agtaacctcggcagcgcctaccactaccaccgtaacttcgacaaggccatgtcctaccac
acgcacgttctggagctggcccaggagctggaggagaagtccatcgagatgagagcctac
gcaggacttggtcacgctgctcgctgcatgcaggacctggagagggccaagcagtaccac
gaacagcagttgtctatagcggagggactgaaggacagggctgcagagggaagggcctcc
tccaatctgggcatcatccaccagatgaagggggactatgagacggcactgaaactccac
aaaactcacctggccatcgctcaggagctgaacgactacgctgctcagggccgggcctat
ggcaacatgggtaatgcctacaacgccctgggagccttcgaccaggcggtccgctaccac
cggcaggagctgcagatctccatggaggtcaacgaccgggcctcgcaggcctccacccac
ggcaacctggcggtggcttaccaggcgctgggcgcccacgaccgcgctctgcaacactac
cagaaccacctcaacatcgcccgggagctccgggacgtccagagcgaggcgcgcgctctg
ggcaacctcggcaacttccactgctctcgcggagagttccctcaggcagtgccctactac
gagcagtacctccgcctgtccccggacctccaggacatggagagcgaagggaaagtttgt
cacaatctgggttatgcccactactgtctgggcaactaccaggacgcggtgaaatactac
gagcaggacttagccctggccaaggacctgcacgacaaactgagtcaggccaaggcgtac
tgtaacctcggcttggcgttcaaagccctgggagacttcaccaaggcggaggagtgtcag
aaatacctgctgtccctggcacagtcgctcaacaacgcacaggctcgcttccgagctctg
gggaacctcggagacatctttgtctgtaagaaagatgtgactggagccattcagttttac
gagcagcaactggccttagctcaccaggttaaggagcgcaggatggaggcctgcgcctac
gccgccctcggggccacctacagacttgtgcagaagtacgacaaagctttgggctaccac
acccaggagctggaggtgtaccaggagctgggcgacgtgtcgggggagtgcaaagcccac
ggtcacctggcagccgtctacatggccctggggaagtacgccatggccttcaagagctac
gaggagcagctggagctgggccggaggctgaaggaccctgtggtggaggctcaggtctac
gggaatatgggcatcaccaaaatgaatgtaggcgtgatggaggaagccattggctacctg
gagcagcagctggccacgttacagcagctgagtgggaacgaggcggtgatggacaggggc
agggcctacgggaacctgggggactgttacgaggctctgggagactttgaggaagccatc
aagtactacgaccagtatctgtcggtggcccagagcctcaaccgcatgcaggaccaggag
aaggcctacagcggcttaggcaacggacacagggccatgggaaacctgcagcagtcgctg
gtgtgttttgagaagcggctcgttgtggcccatgagctgggcgagtgtggaggcaaggct
caggcctacggtgaactgggcgcgctgcacagccagctgggaaattacgagcaggccatc
tcgtgtctggagcgccagctggccatcgcccgtgacacccgggacagactactggagggc
gacgccagctgcggcctgggcgccgtgtatcagtctatgggagagtacgagacggccttg
cgctgccaccaaagtgacctggagatcgccgaggaggcgggcagccccacgcgccaggcc
cgcgcttacgggaacttgggcctcacctacgagtcgctcggaaactacgagcgggcggtc
gtgttccaggaacagcacctgagcgtggcggctcagactaatgacttggctgccaagaca
ctggcctacggcagcctggggaggacacaccacgctctgcagaactactcgcaggctgtc
atgtacctgcaggaaggcgcctccggcgctttcgccgagcagctggttcggcgggaggac
gaggcgaagatccgccatcgtctcgggctctctctgtgggccagtgggaacctggaggag
gcccaacatcagctgtaccgggcctccgctctgtttgagaccatccgccacgaagcccag
cacagcacggactataaactctccctgttcgacctgcaaacctcctgctaccaggcactc
caacgggtcctcgtcagcctaggccaccacgacgaggctctggcggtggcggagcgcggg
cggacgcgagccttcgctgacctcctggtggagaggcagacgggccagcaggactcggac
ccctacaccccggtgacggtggagcacatcctggacacggtcaacagccagagggccctg
gtgctgtatttctccatggctgctggttacctgtacagctggctgctggctccaggagca
ggcatcctgaagtttcatgaggtgtacctgggcgagggcgtgtcagacggaggctcagac
ttccaggagggggggggcagcggcggcggcggggtggtcagcggctcctcgttggagcag
cacatcgccagcgcccgcgaggctctgggagtagagtcttactacagcagagggtgttcg
agcagcgagacggagagcgaggcgggagatttgttggaccaacaatttgaggagctcaac
aacaagcttaactccgtcactgatccaacaggcttcctgcgcatggtgtccagaaacaac
ctgttcaacaggagttgccagagcatgaccagcctgttcagtaacaccatgtcacctgcc
aaagacgggaactcttcgctgcctcgtcgctccagcaacctcggaaagcctccgctgcgg
gccctttatgatctgctcattgcgcctatggaggggggcttgatgcactccagcgggccc
gtcggcagacacagacagctggtgatggtgctggagggggagctgtacctcatccccttc
gctttgctcaaaggaagctcgtccaacgaatacctgtacgagcgcttcagcctcatcgct
gttccctccatccatggccttggaaccagcgcaaaggctcactcccggcgccctggaccg
gctccatgtggcggtgtctcgatggcagcggtggtggggaaccctcgcctgccctcgccc
gtgatggaccgctggctgtggggacccatgccctctgcagaggaggaggccctgatggtg
gctgagctgctgggctgccaaccgctggccggcactgctgccaccaaggagcgggtgatg
agtgccctcacacaggccgagtgtgcccactttgccacccacatttcctggaaactagcg
gctctggtgctcaccccaaaccctgagagcgtgcccggtggagcaggcgccaacgtggga
gttgggaccgtggggagaggtgcaggggggagaagaggcagcagtggccgaggcaggaag
ggctccattggaagcggctacaccatccccgagtctcttcacatgcaggacgacagcagt
gacgtggagagcatatgtgacagcccgcccctgcaggagttcctgctcacagctgcggat
atattggacctgaggttgcccgtcaagctggtggtgctggggtcgtaccaggagtccagc
agcaaagtgacagcagacggtgtggtgggactgaccagggccttcctggctgccggggct
cagtgcgctctcgtgtccctgtggcctgtccccgtcgcggcctccaaagtgtttgtccac
gccttctacaccgcgctgctcaacgggaccaaggccagtgcagcgctggcggacgccatg
aagaccgtccagagcagcaagcagtactcgcacccctccaactgggcaggatacatgctg
attggtaatgattaacatttcagaatgaagtattcagagactttctcacaatacaaaatg
tcacaacccaagatgcgcagatatgctgacgacgctgcacttcgctggtacttgcaggtg
gagaagtcccttcagaggatacagaacggccagcgtaactccatgtatacgtcccagcaa
agtgtggagaacaaggtggggggtgtccctggctggcaggcgctgctgaccgctgtgggc
ttccgtctggactcggtgggcagcggtatgcccgctgcggtcttctttcccaccgctgat
cccggggacaggctccagcagtgcagcaccactttacaatccctgctgggtctgccgccg
cccgctctccaggctttgtgcaaactcatcacagcttcagaggcaggggagcagctcatc
aatcgggctgttaaaaatatggtggcaatgctccaccaggtgctagtccaactccagacg
ggagagaaagaacaggatttctccctcctgcccattcaggtgtccatcagcgtgcagctc
tggagactgccagggtgccacgagttcctggctgctctcggatttgacttatgcgaggtc
ggccaggaggaagtggtgctgaagaccggcaagctagccaaccgccgcaccctgcacttt
gcactccagtctctgctggcgctgtttgactccaccgagcttcccaagcgtctgagcctg
gacagctcctcttccctcgagtctctagcctcggcccagtccgtgtccaaccccctgccc
acggggtactccagcctgcccttctcccccccgtgcctggacagtcaggcctcggacgcc
atctccgtctacagcctcagctccgtggcctcctccatgagctgcgtttccaagtccgag
tgcgatttcctcggccatcggcaacgaggcggcgccacggcgcactactccgtccacaaa
cacccgcacgttcctcggagccgctcgtcgcctcacggggcggctgctgctgctgcggcg
gtggcggcggccgcgacaggggcccgcggggaggacgaggaatacgagggattttccatc
atcagcagcgaaccgctgggaagccactgcgactctttgccgctgccgccgggccacagc
cagcggcaccaccgcggcggcaggggagtcgtgggtgggtccagctcaggagcagggaga
ggctacaccgtatcggtatcgtccaggggcagcgtcagcacccccacgtcccctgttaaa
acatgcctggtgcccagcccgaactccccgttccagaaggtaaagggtaaggtgagcagc
tcggatacgggcgagtcggaccagtccagtaccgagacggacagcactgtcaagtctcag
gaagaaaaaactgtccctctggatcctcaggagctggcccagaagatcctggaggagacc
cagagccatctgcgggccgtggggagcctccagcgggccgggcccgagggagcgacagcc
ggaggaacctcggcgcggagcagcgctttccgctcctccgaaaccagcgcgttcagccgc
cccaacagcagcgccggcggccgagctcagtcgtccccgaggcccaaaccgccctcccgt
tcctcgtcgctgcagaagataagctccggctacaacagccccgcgatctccgagtcttcc
caaaaggagggcagccatccttcgcccactctggacagccacgcgcagttccgattaaag
tacccgagctccccgtacagcggccacatctcccgctccccgagtaacgtgtctcccagt
tcgggtcaccagtccccggccggcagcgctccgtccccggcgctgtcgtactcctccacg
ggctccgcctgctccacgtcggccgaccaggtcccagacctggaccggctaagacgaggc
gtcatcgacgagaaagtccaagcgatccacaatctgaagaccttttgggccaacgccgcg
gcccagcaacagcaacacctgggtcccgtcagagccgtccacggcggtcccgggtccctc
gcctcggccggcagggacgtgctgagcctcctgaacctctctccgcgccgctgctcgccc
aacgatacccaagacagcctggagctgcgggagctggggctgcagtcactagacaggggg
ggcaagaactcctccaacggacaccactgctccaacgccagaaaagtggccccgtcgccg
accatttccacacgcagcagccccggcgctcgttctatccgactacctgccggaaacgga
tacaagttcctgtcgcctggaaggtttttcccttcctctaaatgctga
DBGET
integrated database retrieval system
