Perca fluviatilis (European perch): 120560711
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Entry
120560711 CDS
T11622
Symbol
dmxl1
Name
(RefSeq) dmX-like protein 1 isoform X1
KO
K24155
rabconnectin-3a
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
120560711 (dmxl1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflt04131
]
120560711 (dmxl1)
Membrane trafficking [BR:
pflt04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
120560711 (dmxl1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
120560711 (dmxl1)
RAVE complex
120560711 (dmxl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rav1p_C
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40
WD40_Prp19
Beta-prop_WDR5
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_CDC20-Fz
WDR55
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR3_2nd
Beta-prop_WDR36-Utp21_2nd
Beta-prop_IFT140_1st
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_HPS5
WD40_Gbeta
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_EML
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_VPS8
Beta-prop_SPT8
PEP5_VPS11_N
Beta-prop_IP5PC_F
Beta-prop_Vps41
Beta-prop_WDR19_2nd
Beta-prop_DCAF12
Motif
Other DBs
NCBI-GeneID:
120560711
NCBI-ProteinID:
XP_039659421
LinkDB
All DBs
Position
6:complement(25259941..25320087)
Genome browser
AA seq
3124 aa
AA seq
DB search
MNLHQVLTGAVNPGDNCFSVGSVNDVPFTAYASGCDVVILGSNFERLQIIPGAKHGNIQV
GCVDCSLQGGQIAASYGSIVCVFEPVQHTDPKDTSLTKLNCQWQKTGQFVLKSMVRNLAW
HPTGSTLLTGSSSLQLWSNVDGVKDDAGELEKQTEMTIRETHSAWSCIWQSKTASPVSLM
KFSPDGEFFATAGQDDCLVKVWYSTSKWKSSVSKLFTPPEPSVSFQGELAFSFVYLAHPR
SVTGFSWRKTSKYMPRGAVCNVLLTCCKDSVCRLWAETLLPGDSLLSTYHNNHTDQHSDT
PRCAGPAGKNGCNGKSQGRTAQEVSYSNSNLQESLDACFYRDVPQPSLTGCLPHHQSLHY
NHKRSSSNVPHANALCHFHIAASINPATDIPLLPSISSLSAVDDEEPGGPFTVHWLNNKE
LHFTLAMEVFLQQLRGSLEQGNECSNEEPEDEDNFNEEDNGSRPSNSQVHEAVELPLAAV
KHQVDELLEEWNKGADMLFSIHPMDGSLLVWHVDWLDEYQPGMFRQAQVSFVSRIPVAFP
TGDAISLSHSVVMYACNKNVDLAIQHGRQRPPGNTLPQTKTALISYGGQGKALPSSSLRL
SIFTPNVLMISKHADGSLNQWAVSFAEDSAFSTVLSVSHKSRYCGHRFHLNDLACHSLLP
LLLTTSHHNALRTPEADSILAPPDTYSSGVSHPTSLPRGSRPSRASLGVVSQDPNAIYSE
LILWRVDPVGPLSLSGGVSELARINSLHSSAFANVAWLPTLIPSSCLGVYCNSPSACFVA
SDGHSLRLYQAVIEAKKLLSELSNPEISKYVGEVFNIISQQSTAKPGCIIELDSITDFQG
KQTQLLHVFEEDLILGSEKTESTPETPDFLHTAASSKAAFSARFFLVVVELTPTGRSLLH
MWHLHLAAQPITMEETTMENDATSASAMNSSTLSFDTFRSPVTQKSKPCTSNLQSACRLS
LTTHRLYSQEMALPEGVEAISVTPSAGHLSASCSLPADRVPYLLATSCSDRKVRFWRCNV
MASEPSIMDNLVYQWEEWPLLLEERLPNSSSVSVQGRPIEVSCCHSGRIAVAYRQMPNAP
LSSTPYLNSHGLLTSPLTLASLPYVQYNNNTNTHLTPTLTVQCSPNLTPSPNPANTREQL
VHIGIFQCESTGGSQWILEQTIVLDSTDPTTGSANIPGNMDFPIPNEEDCPGSTSKSLVH
LDWVSQEDGSHVLTVGIGTKIYMYGRLSGKPPELGLTSDASRDQSLSRLVLLRSVDLVSS
VEGSLPIPVSLSWVRDGILVVGMDCEMHVYSQWQPPAPSKPNAAIVQDTDISSSVSSIIS
AVRQSQEEGLSSGAPMSSLAPPKKALTRSMMSLAQKLSGKRTAYDLPVEMEDSGLFEAAH
HLFPTLPQYHPVHLLELMDLGKVHRAKAILSHLVKCIAGEIVTLKDSTTNPEKRVRSQTI
SAGGSTARDRKMFSKAENSTPDYTEISSIPPLPLYALLAADEDTSPKPDKVGSVSGDSGH
GSSHTDVYDELFHTPSIADLDPLEDNQEETGNKVIDLSQYSPTFFGPEHAQVLSSHLLHS
SLPGLTRMEQMSLMALADTIATTSTDLKDSQGKSKGGETLDECGLKFLLAVRLHTFLSTS
LPPAHRAQLLRQGLSTCHYAWAFHSEAEEELLNMLPALQKGEPTWPELRSMGVGWWLRST
NKLRRCIEKVAKTSLQRNNDPLDAAIFYLALKKKAVVWGLYRSQNNAKMTEFFRNNFSED
RWRKAALKNAFSLLGKQRFQHSAAFFLLAGSLKDAVEVCLEKMQDLQLALVISRLYESEF
EMASTYKKILQRHVLGQDKQIQVHKDPFLRSMAHWVLEDYSRALDTLLEQPAYSTSSGST
EIKCGSSSVSACNPEVFNFYTYLRTHPLLLRRHFGSSDKAKVGLTAEGRRADSISLEERK
LFFTAAYAHLQAGCPMLALEVLSKMPKVRKHSKLPNQEDTGTAAELSVGSKNGQTSEPDW
SQPALNGYESDANSLSNSQSDSVLSFDWSQPSLTHPDESLELKWDVDKDDDDEDDDKDEE
ENKNVKSGRSADSSSVFQDTQDALSPLMETVTREDIEDRNDFLAPSNDTLAAQLKFTACL
KIMTNELRTLSTGYELDGGKLRCQLYQWLEREVVALQRCCSYKPCLPELSAQGDAPVSGL
VEEEQPGSPRGDSQRSRRHWLQSNQPLLRMFLSYCNLHGSHGGGLASVRMELILLLQESH
QDDTIQSAVTPCCHPTSIPLLMACTANVKTVVANPIVYLTNLAHDILQTINSLDSPPHPD
VVNNEIYVMHTLAASLSACIYQCLCDGHTHSDVNHFTGIVYQSVLLSQKQPVRTVSMDES
VQPNTSPAQWPGIASLIRLLSSAGEESQPGLAVLLCEILTAVFLSLFVHGMATHSSNELF
RIVAHPLNSKLWVTVFGGGARSPVIEKPNSPTRTPPPASPSGSERKSRRFRLLSSRSGSK
DESGVERGCPSSPKHDPVVEHEATSLFKERFVPPELSVWDYFITKPSLPPSENTIEYDSE
ESQGSQDEEEDDDQYEDVFDPSSPQREHSNHNSYSWCLMRLAMVQLVLVNLKSFYPMAGY
DLLDLPVGSPLCHAVLKTLQRWEQLLQKRLELFGGPPSKYISNSLQDETATPGPALLRHK
ALFEPSNTPFRTSHHSALPEKRLWQFLVKREEVQETFIRNIFTKKRDTNESGEDQTDNMK
CSGMEETGNYQTETDLGSPGGKARIIHKESDIITAFAINKANRNCLVMASTHDIQELDVS
SILATQILTWIDDDAEAKGACSDDFLVVHARDDFTALHGTTPYTHSSPGTPINMPWLGGV
QTGRGAAVVRSKPEVMIKRNINNVRRMTSHPTLPYYLTGAQDGSVRMFEWGHSQQIICFR
SPGNSRVTRIRFNHQGNKFGIVDADGGLSLWQTNTSGNAPKPYLTLQCHNKTANDFVFVG
SSSLIATAGLSTDNRNVCLWDTLVTPANSLVHAFCCHESGATVLLMASRQQLLITGGRKG
WISVLELAHRHQRQSFQAHDSPVKALAVDPTEDCFISGSAEGNIKIWSLATQCLLYTFPN
EHARQSMFRNLGTGVMQIEVGPSNHIFSCGADGTMKMRCLPNRFSVANNNNNHGNLKNDV
KFIV
NT seq
9375 nt
NT seq
+upstream
nt +downstream
nt
atgaatctccatcaggtcctcacgggggctgtcaaccctggagacaattgtttctctgta
gggagcgttaacgatgtgccattcacggcctatgcgtcaggttgtgacgtggtgattctg
ggcagtaactttgagcgactgcagatcatcccaggggccaaacatggcaacatccaggtc
ggctgtgtcgactgctcactgcagggtggacagattgcagcttcctatggaagcattgtg
tgtgtctttgagcctgttcagcacacagatccaaaagacacatcactgactaagttgaac
tgccaatggcagaagactggtcaatttgtattaaagtctatggtacggaacctggcctgg
caccctacaggcagcactttgttaactggctctagtagcctccagttgtggtctaatgtt
gatggagtgaaagatgacgctggagaactggaaaagcagacagagatgaccataagagag
actcattctgcttggagctgtatctggcaaagcaagacggcctctccagtcagtttaatg
aagttctctcctgatggggaattctttgctactgctggacaggatgactgcctagtaaag
gtctggtacagcactagtaagtggaagtcaagtgtttccaaactcttcacacctccagaa
cccagtgtcagtttccagggagagctggccttttcatttgtatacctggcacatccccgt
tctgtaactggtttctcttggaggaagaccagcaagtacatgccacgaggtgcagtgtgt
aatgttctgctcacctgctgcaaggacagcgtgtgtcggctctgggcagagacacttttg
ccgggtgacagcctcctgtccacttaccataacaaccacactgaccagcacagtgacaca
cccaggtgtgctggtcctgctgggaaaaacggctgcaatgggaagtcgcaaggaagaaca
gcacaggaagtaagctactcaaattcgaatcttcaagaatcattggacgcctgcttttat
cgggatgtgccccagccctctctgactggctgcctgcctcaccatcagagcctacactat
aatcataagaggagcagcagcaacgtgccccatgccaacgctctctgccatttccacatt
gctgcaagcatcaaccctgccaccgacattcctctgctgccctccatctcctctctgagt
gctgtggatgatgaggaacctggaggaccttttactgtccactggctcaacaacaaagag
cttcatttcactttagctatggaagtcttcctgcagcagcttagaggcagcctggagcaa
gggaatgaatgctctaatgaagaacctgaagatgaggataactttaatgaagaagacaat
ggtagcaggccaagtaactcccaagtacatgaggctgtggagcttcctctggcagcagtg
aagcaccaggtggacgagctgttagaggagtggaataaaggggcagacatgttgttcagt
atccatcccatggacggctctcttttagtttggcatgtggactggttagatgaataccag
ccaggcatgttcagacaagctcaggtgtcgtttgtgtcccgtatcccagtagcgttccct
acaggtgatgcaatctccttgagccacagtgtggttatgtatgcctgcaacaagaatgtg
gatctggctatccaacatggccggcagcgaccacctgggaacacattgcctcaaaccaaa
actgctcttataagctacggaggtcaaggaaaagctttacccagcagtagtcttcgacta
agcatttttacccccaacgtccttatgatctccaaacacgctgatggctccctgaatcag
tgggcagtcagcttcgcagaggactctgctttctccaccgtgctcagcgtctctcacaag
tcacggtactgtggccaccgcttccaccttaatgacctggcctgtcactcattactccct
ctcctcctcaccacttcacaccacaacgccctgaggacgcctgaggcagacagcatcctg
gctcctccggacacctactcctctggtgtctctcatccaacgtctctgcctcgagggtca
cggcccagtcgggcgtccctgggtgtggtttcccaggatcccaatgcgatctacagtgag
ctgattttatggagagtggaccctgtcggcccactgtctttgtcaggcggggtctccgag
ctagctcgaatcaattctctccattcgtcagcatttgctaatgtagcctggctgcccaca
ctcattcctagcagctgtttaggtgtgtactgtaattctcccagcgcctgcttcgtggca
agtgacggccactcactcaggctgtatcaggctgttattgaagctaagaaactcctgagt
gagctctccaatcctgagatatcaaaatatgttggggaggtgttcaacatcatcagtcag
caatccacagcaaaaccagggtgtattatagagttggattccattactgactttcagggg
aagcagacccaactcctacatgtttttgaggaggatctgatcctcggcagtgagaaaaca
gaaagcacaccggaaactccagattttcttcacacagcagcctcaagcaaggcggctttc
tcggcacggtttttccttgttgtggtcgaattgaccccgacgggtcgctcgctcctccac
atgtggcatctccatcttgctgctcaacctatcaccatggaagaaaccacgatggagaac
gatgccacctcagcttctgctatgaacagctctactttgagctttgacacgttcagatct
ccagtaactcagaagagtaaaccctgcacttccaatctgcagagtgcctgtcgcctcagc
ctcacaacacacaggctgtacagccaagagatggctctgccagaaggagtggaagccatc
agtgttacaccttcagcaggtcacctgagtgcgtcatgttctctgccagctgatcgcgtg
ccttacctccttgctacttcctgttctgatagaaaggtgcggttctggaggtgcaacgtc
atggcgtcagagccttccattatggacaacttggtataccagtgggaggagtggcctctg
ctgttggaggagagacttcccaacagtagctcagtaagtgtgcaaggtcgtcctatagag
gtcagctgctgtcactctggacggattgcagttgcctacaggcagatgccaaacgcacct
ctgagctcgacaccctatctgaactctcacggactgttgacttctcctcttactctggct
tccctcccatatgtgcagtacaacaacaacaccaacacccacctgaccccaaccctaact
gtacagtgtagcccaaatctcactcccagccccaacccagcaaacactagagagcaattg
gtccacattggcatcttccagtgtgagtccactggtggttcgcagtggattctagagcag
actatcgttctggacagcacagatcccacaactggaagtgccaatattccaggtaacatg
gacttccctatacctaacgaggaggactgtcctggttctactagtaagagcctggttcat
ttggactgggtctcccaagaagatgggtcacatgttctgactgttggtattgggacaaag
atttatatgtacggtcgtctgtctgggaagcctccagaactcggtttgacatctgatgcc
agtagagaccagagcttgtctcgcctggttctgcttcgatccgttgatctggtctcctct
gtagaaggctcattacctattccagtctccctctcctgggtaagagatggcatcttggta
gtaggcatggactgtgagatgcacgtctactcccagtggcagcccccagcaccatccaaa
cccaatgctgcgattgtccaagacacagacatcagcagcagcgtctcctccataatctca
gccgtcagacaaagccaggaggaggggctcagctctggggcacccatgtcttcactggcc
cctcccaaaaaggccctgacaagatcgatgatgagcctggctcagaaactcagtgggaag
agaacagcgtatgacctgcctgtagagatggaagattctgggctttttgaagcagctcac
catctctttcccactctgccccagtaccaccctgtacatttattggagctcatggatcta
gggaaggttcaccgtgccaaagccatcctctcccacctggtgaaatgcattgctggagaa
attgtcacacttaaagacagtaccaccaatcctgagaaacgtgtgcgttctcaaaccatc
agcgctggaggcagcacagccagggatcggaagatgttcagcaaagcagagaactccacc
cctgactacacagagataagctccattcctcccctgcctctgtatgcccttcttgcagcc
gatgaggatacatcaccaaaacctgataaagtgggcagtgtgagtggagatagtgggcat
ggttccagtcacactgatgtttatgatgagctgtttcatacacccagcattgcagacctg
gaccctctggaagacaatcaagaggaaactgggaacaaggtaattgacctgtcccagtac
agtccgacattctttggtccagagcatgcccaggttctgtccagtcatcttcttcattcc
agtttgccgggcttaacccgtatggagcagatgtctcttatggcacttgccgacaccatc
gctaccacaagcacagacctcaaggacagccagggcaagagcaaaggtggagagacactg
gatgagtgtggtctaaagttcttgctggccgtcagactccacaccttcctctctacctcc
ctgcctccagcacatcgagcacagctgctacggcaaggcctgtcaacatgtcattatgcc
tgggccttccactctgaggctgaggaggagctgctgaacatgctgcctgccctacagaag
ggagagcccacctggcctgagctgcgctcaatgggtgttggttggtggctgcgcagcacc
aacaagctacgcaggtgtattgagaaggttgccaagacttctttacagagaaacaatgat
cctctggatgcagcaatattttacctcgcactgaaaaagaaggcagtggtctggggattg
tacaggtctcagaacaatgctaaaatgacagagtttttccgcaacaacttcagtgaggac
cgttggaggaaagcagcactgaaaaatgcgttttctctgttgggaaagcagcggttccag
cattctgcagcctttttccttctagccggctccctcaaggatgctgtagaggtttgttta
gagaaaatgcaggacctacagcttgccctggtgatctccagattgtatgagtctgagttt
gagatggcatccacctacaaaaagatcctccagagacatgttctgggacaagacaaacag
attcaagtccacaaagacccgttcctgcggagcatggctcactgggtcctggaggactac
agcagagccttggacactctacttgagcaacctgcttacagcaccagctctgggtccact
gagatcaaatgtggttcctcttctgtgtctgcatgtaatcctgaggttttcaacttttac
acctaccttcgtacccacccactcctccttcgccgccattttggctcttcagacaaggct
aaagttggactgaccgctgagggtcgcagggctgactccattagcctggaggagaggaag
ctgtttttcacagctgcatatgcacacctgcaagctggctgccccatgctagcacttgaa
gtcctctccaagatgccaaaagtccgcaagcattctaaactccccaaccaggaggataca
ggcaccgctgccgaactcagtgttgggagcaagaatggacaaacatcggagccagattgg
tctcagccggctctaaatggctacgagtcagacgcaaacagcttatccaacagccagtca
gattcagtgttaagttttgactggagccagccttcactgacgcatccagacgagtccctg
gagctgaagtgggatgttgacaaagatgatgatgatgaagatgatgataaggatgaagaa
gaaaataaaaatgttaagagcggtagaagtgcagatagcagcagtgtgttccaggacaca
caggatgccttgtcgccattaatggagacagtgacgagagaggacattgaagaccgcaat
gacttcctggctccatctaatgacaccttggcggcccagctcaagttcactgcctgcttg
aagattatgaccaatgagctccggacgctgtcgacagggtatgaactggatggagggaag
ctacgttgccagctctaccagtggttggaaagagaggtggtggctctccagcgttgctgc
agctacaagccctgcttgccagagctgtctgcccagggtgatgcccctgtttctgggttg
gtagaggaggaacagcccgggagtcctcgtggtgacagccagaggagcaggaggcactgg
ctgcagagtaaccagcccttactgaggatgtttctgagctactgcaacttgcatggctcc
cacggtggaggactggcctcggtgcgcatggagctcatattattgcttcaagagtctcac
caggatgacaccatccagtcagcggtgacgccatgttgtcacccaacttctatccctctt
ctgatggcttgcacggccaacgtaaagacagtggtggccaatcctatcgtctacctgacc
aacctggctcatgacatcttgcagaccatcaattcactcgactctcctccgcatcccgat
gtcgttaacaatgagatctatgtgatgcacacattggctgcctccctgtcagcctgtata
tatcagtgtctgtgtgatggacacacccacagcgatgtgaaccatttcacaggaatcgtg
tatcagagtgttttgctgtctcagaagcagccagtcagaacggtcagcatggatgagtct
gttcagcccaacacttctcctgcacagtggccaggtatagcctctctgattcgcctattg
agctcagcaggcgaggagagccagccaggcttagctgtgctgctctgtgagatcctgacc
gctgtcttcctcagtctgtttgttcacggcatggccactcactctagcaacgagctgttc
cgcattgtggcccacccactcaacagcaagctttgggtgaccgtgttcggaggaggtgcc
aggagccctgtcatagagaaaccaaacagcccaacaagaacacccccaccagcctcaccg
agtggctcagaaaggaagtccaggcgattcaggcttctgtcatcacgcagtggatcaaag
gatgagtctggagtagagcgggggtgcccatccagtcccaagcatgaccctgtagtagaa
catgaagctacctcactctttaaagaacgatttgtccctccagagctcagcgtttgggat
tactttatcaccaagccttcactgccaccatcagaaaacacaattgaatatgactcagag
gagagccagggcagtcaagatgaagaggaagatgatgatcaatatgaagatgtgtttgac
cccagctctccgcaaagagagcattcaaaccacaattcatacagttggtgtttgatgcgt
ctggcaatggttcagctggtgttggtcaacctcaagtccttttacccaatggcaggatat
gatctattagatctgcctgtgggctctcctctgtgtcacgctgtgctgaagacactgcag
cgttgggagcagctgctgcagaaaaggctggagctcttcgggggccccccttccaagtac
atctccaactccctccaggatgaaacagccacaccgggccccgccctgctcagacacaag
gccctgtttgaaccatccaacaccccgttcaggactagccaccattcagcactgccagag
aagcgtctgtggcagtttttggtcaagcgggaagaagttcaggagactttcattagaaac
atctttaccaagaaacgggacacaaatgagtcgggtgaggaccagactgacaatatgaaa
tgttcagggatggaggagacaggaaactatcagactgagacggatctgggctcccccgga
ggaaaggcacgcatcatccacaaggaatctgacatcatcacagcctttgccatcaacaag
gcaaatcgtaattgtttagtgatggcctccacccatgacattcaggagttggatgtgtca
tccatcttggccacacagatcttgacatggatcgatgatgacgcagaagccaaaggtgct
tgtagtgatgacttcctggtggttcatgcgcgtgatgactttaccgccctccacggcacc
acaccatacactcacagtagccccggcacacccatcaacatgccgtggctgggaggagtg
cagacaggccggggtgcagctgtggtgagatctaaacctgaagttatgatcaagagaaat
atcaacaatgtgagaagaatgacctcccatcccacactgccttactacctgacaggagct
caggatggtagcgtcaggatgtttgagtggggtcactcccagcagatcatctgcttcaga
agtccaggcaactccagagtcaccaggatacggttcaaccaccagggaaacaagttcggt
atcgtcgatgctgatggaggtttgagtctctggcagaccaacacaagtgggaatgcacct
aaaccatacctaacattgcagtgccacaacaagacagctaacgactttgtctttgtgggc
tcctcctccctcattgccactgcaggtctttcaacagacaacaggaatgtgtgtctatgg
gacactctggtgactcctgcaaacagccttgtacatgctttctgctgccatgaatccgga
gctacggtgctcttgatggcctccaggcagcagctgcttatcaccggtggaaggaagggc
tggatcagtgtcctggagctcgcccacaggcatcagcgtcagagcttccaggcccacgac
tcgccggtcaaagcgctggctgtcgatccgactgaggactgctttatcagtggatcagct
gagggcaacatcaagatctggagcctggccacacagtgtctgctctacacctttcccaac
gaacacgctcgccagtccatgttcaggaacctcggcacgggcgtcatgcagatcgaggtg
ggaccgtccaatcacatcttctcctgcggcgcagacggaaccatgaagatgaggtgcctc
cccaaccgcttcagtgtcgccaataacaacaacaaccacggcaacctcaagaacgatgtc
aagttcatcgtatag
DBGET
integrated database retrieval system
