Perca fluviatilis (European perch): 120561254
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Entry
120561254 CDS
T11622
Symbol
eif4a3
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt03013
Nucleocytoplasmic transport
pflt03015
mRNA surveillance pathway
pflt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120561254 (eif4a3)
09122 Translation
03013 Nucleocytoplasmic transport
120561254 (eif4a3)
03015 mRNA surveillance pathway
120561254 (eif4a3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflt03019
]
120561254 (eif4a3)
03041 Spliceosome [BR:
pflt03041
]
120561254 (eif4a3)
03009 Ribosome biogenesis [BR:
pflt03009
]
120561254 (eif4a3)
03012 Translation factors [BR:
pflt03012
]
120561254 (eif4a3)
Enzymes [BR:
pflt01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
120561254 (eif4a3)
Messenger RNA biogenesis [BR:
pflt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
120561254 (eif4a3)
mRNA cycle factors
Stress granule specific factors
120561254 (eif4a3)
Spliceosome [BR:
pflt03041
]
Complex C
Other components
EJC/TREX
120561254 (eif4a3)
Ribosome biogenesis [BR:
pflt03009
]
Eukaryotic type
90S particles
Helicases
120561254 (eif4a3)
Translation factors [BR:
pflt03012
]
Eukaryotic type
Initiation factors
eIF-4
120561254 (eif4a3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_22
Cas3-like_C_2
AAA_30
Flavi_DEAD
TniB
Motif
Other DBs
NCBI-GeneID:
120561254
NCBI-ProteinID:
XP_039660229
LinkDB
All DBs
Position
1:2882923..2891005
Genome browser
AA seq
406 aa
AA seq
DB search
MAAAVVQGRKRLLREEDMTKVEFETSEEVDVTPTFDTMGLREDLLRGIYAYGFEKPSAIQ
QRAIKQIIKGRDVIAQSQSGTGKTATFCVSVLQCLDIQVRETQALILAPTRELAGQIQKV
LLALGDYMNVQCHACIGGTNVGEDIRKLDYGQHVVAGTPGRVFDMIRRRSLRTRAIKMLV
LDEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTNKFMTDPIRILVKRDE
LTLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTEKMREANFTVS
SMHGDMPQKERESIMKEFRSGASRVLISTDVWARGLDVPQVSLIINYDLPNNRELYIHRI
GRSGRYGRKGVAINFVKNDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1221 nt
NT seq
+upstream
nt +downstream
nt
atggctgctgccgtggttcagggcaggaagagactcctgcgggaagaagacatgactaag
gtggagtttgagaccagcgaggaggtggatgtgacccccaccttcgacaccatgggcctg
cgggaggacctgctccgcggcatctacgcttacgggtttgagaagccgtcagcgatccag
cagagagccatcaaacagatcatcaaaggccgagacgtcatcgcacagtctcagtctgga
acgggaaagacggccactttctgcgtgtcggtgctgcagtgtctcgacatccaggtgcgg
gagacccaggctctgatcctggcccccaccagagagctggcgggccagatccagaaggtc
ctgctggctctgggagactacatgaacgtgcagtgccacgcctgcatcggaggcaccaac
gtgggagaagacatccggaagctggactatgggcagcacgtggtggctgggacgcccgga
cgcgtgttcgatatgattcgccgccggagtctgaggaccagagccatcaagatgctggtc
ctggacgaggccgacgagatgctcaacaaaggttttaaggagcagatctacgatgtgtac
cgttaccttcctccggccacgcaggtggttctgatcagcgccacgctgccgcacgagatc
ctggagatgaccaacaagttcatgacagaccccatccgcatcctggtcaaacgtgatgag
ctgactctggaggggatcaagcagttcttcgtggccgtggagagagaggagtggaagttt
gatacgctgtgtgatctctacgacacactgaccatcacacaggctgtcatcttctgcaac
accaagagaaaggtggactggctgacggagaagatgcgagaggccaacttcacggtgtct
tcgatgcacggagacatgccgcagaaagagagggagtccatcatgaaggagttcagatct
ggagccagccgcgtgttgatctctacagatgtttgggcgcgaggtttagacgttcctcaa
gtttctctgatcatcaactacgacctgcccaacaacagagagctctacatccacaggatt
ggccggtcggggcggtacggccgtaagggcgtggccatcaactttgtgaagaacgacgac
atccggatcctgagagacatcgagcagtactactccacgcagatcgacgagatgcccatg
aacgtggccgatctgatctga
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