Perca fluviatilis (European perch): 120561267
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Entry
120561267 CDS
T11622
Symbol
gtf2h2
Name
(RefSeq) general transcription factor IIH subunit 2
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt03022
Basal transcription factors
pflt03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120561267 (gtf2h2)
09124 Replication and repair
03420 Nucleotide excision repair
120561267 (gtf2h2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pflt03021
]
120561267 (gtf2h2)
03400 DNA repair and recombination proteins [BR:
pflt03400
]
120561267 (gtf2h2)
Transcription machinery [BR:
pflt03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
120561267 (gtf2h2)
DNA repair and recombination proteins [BR:
pflt03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
120561267 (gtf2h2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Zn_ribbon_GTF2H2
Motif
Other DBs
NCBI-GeneID:
120561267
NCBI-ProteinID:
XP_039660238
LinkDB
All DBs
Position
6:11218951..11231887
Genome browser
AA seq
392 aa
AA seq
DB search
MDEEPERAKRWEGGYERTWEVLKEDESGSLKATVEEILFQSKRKRVIESHGQVRLGMMRH
LHVVIDCSRSMEDQDLKPNRLTSTLKLLETFVDEYFDQNPISQLGIITTKNKRAEKLTDL
AGNPKKHTAALKKAVDTVCLGEPSIYNSLNLAIQTLKHMPGHTSREILIILSSLTTCDPA
NICELIKTLKSLKVRVSVIGLSAEVRVCTVLTRETGGSYHVILDESHFKELLMLHVKPPP
ASSSSECSLIRMGFPQHTTASLTDQDAKPSFSMSHLDSSSAPGLSLGGYFCPQCHAKYTE
LPVECKVCGLTLVSAPHLARSFHHLFPLQAFIESPVEEFQEDRFCQACQGELKDKSIFTC
PSCRSVFCVECDLFIHDLLHCCPCCIHSQSAP
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagaaccagagagagccaagcgctgggaagggggctatgagaggacatgggag
gtgctgaaggaggacgaatctggctcactaaaagccacagtggaagagatcctgttccag
tccaaaaggaaaagggtgatagagagccatggacaagtaaggcttggaatgatgcggcac
ctccatgtggtgattgactgttcaagaagtatggaagaccaggacttgaaaccaaaccgc
ctcacctctactctaaagctgttggaaacttttgttgatgagtattttgaccaaaacccc
atcagtcagctaggcattatcaccacgaagaataaaagggctgagaagcttactgatctg
gcaggaaatccaaagaagcacactgctgctctgaagaaagcagtggacactgtgtgttta
ggagagccatccatatacaactctctcaacctggccatacagaccctcaagcacatgcct
ggacatacaagccgggagatcctgataatcctcagcagccttactacatgtgacccagcc
aacatctgtgagctgattaagaccctaaagtctctgaaagtgcgcgtgtctgtaatcggc
ctgtcagcagaggtcagggtgtgtacagtattgaccagggagacgggcgggtcgtaccac
gttatcctggatgagagccacttcaaagagctgctgatgctgcatgtcaaacctcctcca
gccagctcctcatctgaatgttctttaatacgcatgggttttcctcagcacaccaccgcc
tctctgactgaccaggatgccaagccttcattcagcatgtctcatctggacagcagcagt
gcaccaggtctgtctctgggaggatacttctgtccgcagtgccacgccaagtacacagag
cttcccgtagagtgtaaagtctgtggtttgactctggtgtcggctccccatctcgccaga
tctttccaccacctcttccccctccaagcctttatagagagtcctgtggaggagtttcaa
gaagacaggttctgtcaagcttgtcaaggggagctgaaagataaaagtatattcacctgt
ccatcatgtcgcagtgtgttctgtgtggagtgtgatctcttcatccatgacttgctacac
tgctgcccttgctgtattcacagtcagagcgccccctga
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