Perca fluviatilis (European perch): 120562033
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Entry
120562033 CDS
T11622
Symbol
smg9
Name
(RefSeq) protein SMG9 isoform X1
KO
K18735
protein SMG9
Organism
pflt Perca fluviatilis (European perch)
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pflt03019
]
120562033 (smg9)
Messenger RNA biogenesis [BR:
pflt03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
120562033 (smg9)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg8_Smg9
ABC_tran
BrxC-PglY_N
AAA_16
URGCP_GTPase
NB-ARC
AAA_18
AAA_29
MeaB
Motif
Other DBs
NCBI-GeneID:
120562033
NCBI-ProteinID:
XP_039661385
LinkDB
All DBs
Position
7:18425189..18436249
Genome browser
AA seq
508 aa
AA seq
DB search
MSESGHSQPGMYGQGRRRRRRRGDRDAGLPGQNLSGPSRDREYQPRERRDGSEDPPGPLI
QKTPIILAKPPGERAKPSQNAPVSGAPVLEKPIMLMKARDDGGKPGTPPEAAAQPSGPGP
SKMEREGQRPTQPVYQIQNRGMGASASSSAVDPMVGQSKLLPPEKMKHSIKLVDDQMNWC
DSAMEYLRDQTDMLVVGVIGLQGSGKSTIMSLLSANTPEEDQRGYVFRAQTQEIKERGGN
QSTGIDFFITQERVIFLDTQPMLSPSILDHLINNDRKLPPEYNLPHTYVEMQSLQIAAFL
FTVCHVVIVVQDWFTDLNLYRFLQTAEMLKPSTPSASHDSTGSSGNDDGAEYYPHIVFLQ
NKARQDDFCPRNLKNMHMVVDKLMAHSHLKYKGKLSMLDCSIFPGLGQDYLATEVNMFLL
PMQENDGEDNLTKAGSGAYPLFSLLPGYRGHPAFSTMVSKLRSQILAMPRCQLSHTILTE
KNWFHYAARIWDGVKKSSALSEYSRLLC
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgtccgagtccggccacagccagcccgggatgtacgggcagggacgcaggaggaggaga
cgccgaggagacagagatgctggacttcctgggcaaaatctgtccggtcccagtagggac
cgagaatatcaaccgagagaacgaagggatgggagcgaggatccaccaggcccacttatt
cagaagacccccatcattcttgcaaaaccccctggggaaagggccaagccgtcacagaat
gcacctgtcagtggagctccagtcctggagaagcccatcatgttaatgaaagcccgggac
gatggagggaagccagggacccctcccgaagcagcagctcagccctctggtcctgggccc
tccaagatggagagggaagggcagcgacccacccagcctgtttaccagatccaaaacaga
ggaatgggtgcatctgcatcaagcagcgctgttgaccccatggtgggccagtctaaactc
ctccctccggagaagatgaagcacagcattaagcttgtggatgatcagatgaattggtgt
gacagtgccatggagtatctgagggaccagacggatatgttggtggtgggagtcattggc
ctgcagggaagtgggaaatctacaatcatgtcactgttatctgccaatactccagaggaa
gatcaaaggggctatgtattcagagcccagactcaagaaatcaaggaaagaggaggaaac
cagagcacaggcattgatttctttattacacaggagagagtcatcttcctggatacacag
cccatgctcagcccatctattctcgaccacctcatcaacaacgatcggaagttgcctcca
gagtacaacctccctcacacatatgttgagatgcagtctcttcagatcgctgccttcctg
tttacagtgtgccatgtggttattgtggttcaagactggttcacggacttaaacctctac
aggtttcttcagactgctgagatgctcaaaccttccactccgtctgcaagccatgacagc
actggctcttcaggcaatgacgatggagcagagtactatcctcatatagtgttcctccag
aataaggccaggcaggatgatttctgcccaaggaatctgaagaatatgcatatggtggtg
gacaaattaatggcccactctcatctcaaatacaaaggtaaattatccatgctagactgc
agtatcttccctggcttggggcaggactatttggcaaccgaagtcaacatgttcctcctc
cctatgcaggagaatgatggcgaggataatctcactaaagcagggtcgggagcataccca
ctcttctctctgctcccggggtacagaggacatcctgccttctccaccatggtttcaaaa
ctccgcagccaaatactggccatgccccgctgtcagctgtcacacaccatcctcactgag
aagaactggtttcactacgcagcgcgtatctgggatggggtgaaaaagtcctcggccctc
tccgagtacagccgcctactctgctaa
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