KEGG   Perca fluviatilis (European perch): 120562872
Entry
120562872         CDS       T11622                                 
Symbol
xrcc1
Name
(RefSeq) DNA repair protein XRCC1
  KO
K10803  DNA-repair protein XRCC1
Organism
pflt  Perca fluviatilis (European perch)
Pathway
pflt03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:pflt00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    120562872 (xrcc1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pflt03400]
    120562872 (xrcc1)
DNA repair and recombination proteins [BR:pflt03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Short Patch-BER factors
     120562872 (xrcc1)
SSDB
Motif
Pfam: XRCC1_N BRCT BRCT_2 PTCB-BRCT LIG3_BRCT
Other DBs
NCBI-GeneID: 120562872
NCBI-ProteinID: XP_039662728
LinkDB
Position
7:28354424..28379143
AA seq 625 aa
MPEIQLKHVVSCTTEDPTHKADNLLSSDTYRKWKAARPGEKQTSVILQFEKEEQVHSIDI
GNEGSAFIEVLVGNSSAVRDQDYEVLLVTSSFMSPTESRNGTNLNRVRFFGPNQLQKSTA
QEKWDRVKIVCSQPYSKNIAYGVAFVKFHSPPDKNDPPPTTSPKLTKLGQFKVKEEPLSP
AASLQPGSLFFSRDNATKSSTSLKVSPQNERLSYAAAALQAGGSSHSSGQASSSSSASPQ
PPAKRKFEFSKARQSSPGPPPSKKISPAGSPEGKAVTPKHKPSPASTPSPSTAKAAPGQK
SADRKRESQSEPKPKPKQPKPSVQQVPFKRMMEGVVFVLSGFQNPFRGELREKALDMGAK
YRPDWTPDSTHLICAFANTPKYSQVKSAGGIIVRREWIMDCHKRKQMISYKRYLMDGAES
SSESEMEGDDQSEEEINTKTPPKQERQVTPKKTPEKKTEDDEYAGSTDVDEPGDGDDESA
VDTEDELQRVENESRQKKAAAGGKVVKQEDPYGGSTDENTDAEAEEDHPIPELPDFLKGK
HFFLYGKFPNNERRLLLRYIVAFNGLIEDYMTEKVQFVVTSEGWHDSFEDALMENGNLNF
VKPAWIYAINERQKILPYQPYSVVP
NT seq 1878 nt   +upstreamnt  +downstreamnt
atgccagaaatccaactcaaacacgtcgtgtcttgcaccaccgaggaccctactcacaag
gcagacaacctgctgagctctgacacctacagaaagtggaaagcagcaagacccggggag
aaacagacatcagtcattctgcagttcgagaaggaggagcaggtgcacagcattgatatt
ggaaatgaaggatcagctttcatcgaggtgctggtggggaattcttcagctgtcagagac
caggactatgaggttcttttggttacgtcttccttcatgtccccaacggagagccgtaac
ggcaccaacttgaaccgggtgcgtttctttgggcccaaccagctgcagaagagcacagca
caggagaagtgggaccgagtgaaaattgtgtgtagccagccatacagcaagaacatagcg
tacggagtggcctttgttaagtttcattcaccacctgacaaaaatgatcctcctccaaca
acatccccgaaactgacaaagctgggacagttcaaggtgaaggaggagcctctttcacct
gctgccagccttcagcctggcagtcttttcttcagtcgggacaatgcaacaaagtccagt
acttcactcaaagtgtctcctcagaatgagaggttgagttacgctgcagctgccctgcag
gctggtggcagctcccattcatcaggccaagcttcctcctccagctctgcctcaccacag
ccaccagcaaaaaggaaatttgagttcagcaaagcgcggcaatcttcccccggccctcca
ccctcgaagaaaataagcccagctggctcacctgagggcaaagctgtgacccccaaacac
aagccgagcccagccagcacgccaagccccagcaccgcgaaagctgccccgggacagaag
tctgctgacaggaagcgggagagccaatccgaacccaaacccaaacccaaacaaccgaaa
cctagcgtgcagcaggtcccattcaaacggatgatggagggggtcgtgtttgtcctcagt
ggcttccaaaaccccttcagaggggagctgagggaaaaggctctggacatgggagccaaa
taccggcccgactggacacccgactccacacacctcatctgtgccttcgctaacaccccc
aagtacagccaggtgaaatcagcagggggcatcatcgtacggagagaatggataatggac
tgccataagaggaaacagatgatctcctataaacggtatttgatggatggagcagagtcg
agctcggagagcgaaatggaaggggacgaccagagtgaagaggaaatcaacacaaagact
ccaccgaagcaggagagacaagtgacccccaaaaagacgcccgagaagaagactgaagat
gatgagtatgccggctccactgatgtggatgaaccaggagacggtgatgatgagtctgca
gtggacacggaggacgagctgcagagggtggagaacgagagcagacagaagaaagcagca
gcaggagggaaggtggtgaaacaggaggatccatatggggggtcgacagatgaaaacaca
gacgccgaggctgaagaggatcaccccatccctgaactaccagacttcctgaaaggaaag
catttcttcctctacggtaaattccctaacaacgagaggcgccttctgctgagatacatc
gttgcctttaatggactgattgaagactacatgaccgagaaggtgcagtttgtggtgacc
agtgaagggtggcacgactcctttgaagacgcgctgatggagaacggcaatctgaacttt
gtcaaacccgcatggatttatgcaatcaatgaacgacaaaagatactgccctaccaaccc
tactcggtcgtcccctga

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