Perca fluviatilis (European perch): 120566862
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Entry
120566862 CDS
T11622
Symbol
pcdh19
Name
(RefSeq) protocadherin-19 isoform X1
KO
K28837
protocadherin-19, delta 2
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120566862 (pcdh19)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
pflt04515
]
120566862 (pcdh19)
Cell adhesion molecules [BR:
pflt04515
]
Cadherins
Protocadherins
120566862 (pcdh19)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Ig_CLSTN
Cadherin_2
Ig_Cad99C_N
Ig_BT4661_3rd
PepSY
Cadherin_FAT4_N
Motif
Other DBs
NCBI-GeneID:
120566862
NCBI-ProteinID:
XP_039669457
LinkDB
All DBs
Position
10:25594313..25648201
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AA seq
1098 aa
AA seq
DB search
MQTKEMELIQVIAFFLLFWVGAEAVINLKYGINEEMKPGSVIGNVTKDALKQGFEISLQP
PYLKVISNSEPRWVELSPAGILTTQMKIDRDVVCRQNPKCIISLEVMSDSMEICVIKVEI
EDLNDNAPRFPTSHIDIEISENASPGTRFPLEGASDPDSGIFGVQSYSITPNELFGLEIK
TRGDGTKIAELVVQKSLDRETQSHYTYEISAEDGGDPPKIGAVQLNIKVIDSNDNNPVFD
EPVYTVNVMENSPINTLVVDLNATDPDEGTNGEIVYSFNSYVTEKTRDTFKIDPRTGIIT
VNGVLDYETAQIYEIDVQAKDLGPNSIPAHCKVTVNVMDTNDNPPVISILSLNTEMVEVS
ENAQRGYVIALVRVSDKDSGANGKVQCRLQGNVPFRLQEYESFSTILVDGRLDREQKDTY
NLTIQAEDSGMPPLRATKSLVIKVTDENDNPPHFLKPHYQEMVMENNLPGSCLLAVSAED
PDLGMNGTVSYSIVPGEIKHMDVNTYVSINPSGRIYSMRSFDHEYTRTFDFKVLARDNGN
PSLSSNATVRIVVLDVNDNTPVMTNPPLVNGTAEVSIPRNAGVGYMVTQVKADDYDEGEN
GRLAYTISEGDRAFFEIDQVNGEVRSTRMFGENAKSTYEITVVARDHGKPSLSASAYIVV
YLSPDLNAQESIGPVNLSLIFIIALGSIAAILFVTMIFVAIKCKRDNKEIRTYNCSFFYL
RRVAEYSYGNQKKSSKKKKLSKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQSL
PLGCRRSESTFLNVENQNSRNAAPNHGYQHPFTGQGHQQPDLIINGMPLPETENYSIDSS
YVNSRAHLIKRPPCSTSTFKDLEGNSLKDSGHEESDQTDSEHDVQRGHYVDTAVNDVLNM
TVPPNVCQLPDQDPSEGFHCQDECRILGHSDRCWMPRVPIPARAKSPEHGRNVIALSIEA
TTVDVPHYENGTTKRTFATFGKDGPEDVERGEFKGKRTQESQVCSPKANGGAVREAGNGR
EAASPITSPVHLKSPVSKPSSAYNTLKGRDAERIANHSLLRQPEGKDSEPAVREINTLLH
DGRDKESPSSKRLKDIVL
NT seq
3297 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaaggagatggaattaatacaagtaattgctttcttcctcttattctgggtc
ggggctgaggctgtaatcaacctaaagtatggaataaacgaggagatgaagcccgggtca
gtaattggaaacgtgacaaaggacgcactaaagcaaggatttgagatttcactgcagccc
ccatacttaaaggttatttctaattcagagccacgatgggtggaactcagtccagccgga
atccttacaacccaaatgaaaatagatcgggacgtagtttgtcgacagaacccaaagtgc
attatttccctagaagtgatgtcagactctatggagatctgtgtcatcaaagttgaaatt
gaggatttaaacgataacgcacctagattcccaacgagccacattgacattgaaatttct
gagaatgcctcccctggtaccaggtttcccctagagggggcaagcgatccggactcgggg
atctttggagtgcaatcatattccatcaccccaaatgagcttttcggactagaaataaag
accagaggggatgggaccaaaattgctgagcttgttgtgcaaaagtcgttagacagggag
acccagtcccactatacatatgaaatcagcgcagaagatggaggagaccctcctaagata
ggcgcggtccagttaaatatcaaggtaattgattctaatgacaacaaccccgtttttgac
gagccagtgtatactgttaatgtgatggagaattcccccatcaatacattagtggtagac
ttgaatgcaacggatcccgacgagggcactaacggagagattgtgtactcgttcaacagt
tacgtcaccgagaaaacgagggatacgtttaaaattgaccccagaactgggatcatcact
gtcaacggtgttttggattatgaaacggcgcaaatatatgaaatcgacgtccaggccaaa
gatttaggtcccaactctatcccagctcactgcaaagtcacagtgaatgtgatggacacg
aacgataacccacctgtcatcagtatactctcactgaacacagagatggtcgaagttagt
gaaaacgcgcagcgtggatatgtcatagcgctagtgagggtgtcagataaggattctggg
gcaaacggcaaagtgcagtgcaggctgcagggcaatgttcctttcagacttcaagaatac
gagagcttctccactatacttgttgatggcaggctggacagagagcaaaaggacacatac
aacctgactatccaagcggaggacagtggcatgcctcctttacgcgccacaaagtctttg
gtaatcaaagtcacagatgaaaatgacaaccctccccacttccttaaaccacactatcaa
gagatggtgatggaaaacaaccttcctggttcatgtctgctagcagtgtcagcagaagac
ccggacctggggatgaatggcacagtttcctactccatagtccccggtgagattaagcac
atggatgtaaacacatatgtcagcataaacccatcaggccgcatttactccatgagatca
ttcgaccatgaatacaccaggacttttgatttcaaagtgttggccagagacaatggtaat
ccctctctgtcgagtaacgccacggtgcgtattgttgtcttggatgtcaacgataacaca
cctgttatgacaaaccctccactagttaatggcacagcggaggtttccatcccaagaaac
gctggggtgggttacatggtgacccaagtcaaagcagacgactatgatgagggggagaac
gggcggctggcctacaccatctcagagggggacagggctttctttgaaatcgaccaggtg
aacggagaggtgcgctccaccaggatgtttggagaaaacgccaaatccacctacgagatc
acagtggtggcgagggaccacggcaagccctccctgtccgcctcggcctacatcgtggtg
tacctgtctccagacctgaacgcacaggagtctattggacctgtcaacctgtccctcatc
ttcatcatcgctctgggctctatcgcagccatcctgtttgtcactatgatatttgtggcg
atcaagtgcaagagggataacaaggagatccggacgtacaactgcagtttcttctacttg
cgcagggtggcggagtactcatatggcaaccagaagaagtccagcaagaagaagaagctg
agcaagaacgacatccgcctggtgccacgtgacgtcgaggagacagacaagatgaatgtg
gtgagttgctcgtctctcacctcctcgctcaactacttcgactaccaccagcagagcctg
ccgctgggctgcaggcgctccgagagcaccttcctcaacgtggagaaccagaactcacgc
aatgcagctcccaaccatggctatcagcacccgttcactgggcagggccaccagcagcca
gacctcatcatcaacggcatgccactgccagagacggagaattattccattgactccagt
tacgtgaacagcagagcccacctcattaaaaggcccccatgtagcacgtcgacattcaag
gacctggaggggaacagtctgaaggacagtggccacgaggagagcgaccagaccgacagt
gaacatgatgtccagagaggacactatgttgacacggctgtcaatgacgtgctgaacatg
actgtcccccccaatgtttgccagctgccagaccaagatcccagcgaaggctttcactgc
caggacgagtgtcgcatcctaggccactctgaccgctgttggatgcctcgtgtcccaatc
ccggctcgtgccaagtcacccgagcacggccgtaacgtcatcgctttgtctatcgaggcc
accacagtggacgtgccccactacgagaatggcaccaccaagaggacttttgccaccttc
ggcaaggatgggcctgaggacgtggaacggggagagtttaagggaaagcggactcaggag
tctcaggtgtgtagccccaaggccaatggaggggctgtccgtgaagctggcaatgggcgc
gaggcagccagccccatcacttcccctgttcacctgaagagcccagtgtccaagccgtcg
tctgcctacaacacgctgaaaggccgcgatgcagagcgaatcgccaaccacagcctgctg
cggcagccggaggggaaggacagtgagccagctgtcagggagatcaacacgcttctccac
gatggccgagacaaggaatcccccagcagcaagcgcctgaaggacattgtgctttag
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