KEGG   Perca fluviatilis (European perch): 120567721
Entry
120567721         CDS       T11622                                 
Symbol
lsm6
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm6
  KO
K12625  U6 snRNA-associated Sm-like protein LSm6
Organism
pflt  Perca fluviatilis (European perch)
Pathway
pflt03018  RNA degradation
pflt03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pflt00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    120567721 (lsm6)
  09123 Folding, sorting and degradation
   03018 RNA degradation
    120567721 (lsm6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:pflt03019]
    120567721 (lsm6)
   03041 Spliceosome [BR:pflt03041]
    120567721 (lsm6)
Messenger RNA biogenesis [BR:pflt03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120567721 (lsm6)
  mRNA degradation factors
   5'-3' decay
    Lsm complex
     120567721 (lsm6)
Spliceosome [BR:pflt03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   LSm proteins
    120567721 (lsm6)
SSDB
Motif
Pfam: LSM SM-ATX
Other DBs
NCBI-GeneID: 120567721
NCBI-ProteinID: XP_039670668
LinkDB
Position
1:32020164..32022540
AA seq 80 aa
MSLRKQTPSDFLKQIIGRPVVVKLNSGVDYRGVLACLDGYMNIAIEQTEEYVNGQLKNKY
GDAFLRGNNVLYISTQKRKV
NT seq 243 nt   +upstreamnt  +downstreamnt
atgagtctgagaaagcagaccccaagtgactttctgaagcagataattgggagacctgtg
gtggtcaaattgaactctggtgtcgattacagaggtgtcctggcctgcctggatggttac
atgaacatcgccatagagcagactgaggagtatgtcaatgggcagctcaagaacaagtac
ggagacgcttttctaagaggaaacaatgtcctttacatcagcacccagaagaggaaagtg
tag

DBGET integrated database retrieval system