Perca fluviatilis (European perch): 120571602
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Entry
120571602 CDS
T11622
Symbol
grin2da
Name
(RefSeq) LOW QUALITY PROTEIN: glutamate receptor ionotropic, NMDA 2D
KO
K05212
glutamate receptor ionotropic, NMDA 2D
Organism
pflt
Perca fluviatilis (European perch)
Pathway
pflt04020
Calcium signaling pathway
pflt04080
Neuroactive ligand-receptor interaction
pflt04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
120571602 (grin2da)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
120571602 (grin2da)
04082 Neuroactive ligand signaling
120571602 (grin2da)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
pflt04040
]
120571602 (grin2da)
Ion channels [BR:
pflt04040
]
Ligand-gated channels
Glutamate (ionotropic)
120571602 (grin2da)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
ANF_receptor
Gp7_5th
Motif
Other DBs
NCBI-GeneID:
120571602
NCBI-ProteinID:
XP_039676590
LinkDB
All DBs
Position
13:29434728..29611496
Genome browser
AA seq
1903 aa
AA seq
DB search
MAFFSASFSTSLSMAALVGETVMTPSGQANVIYLAVNESSPGSLLLQLCELLATTPLQGL
VFEEERPPPPNRAPLAPMLEFVSAQTGVPVVAVGGGASLGREPQESGSIYLQFTCSTSLQ
LEVIFEVLEEYDWTSFSVVTTRHHGYEDFLAMVEGMTDGSFIGWDKKSVVILNVTDDPGG
ARTKRLLKDNEAQVRLLYCSLEEAELVFRAAVAAGQAGSSHMWFAVGPALSGLGLEGLPK
ALFAIRPQGWRDEPRRRIAKGVSVLTHGAMALRRDLGTNSRSQYAGNCQSDGNQTHRVPD
RIRYFSNISLGGRDYSFNSDGYLSNPLLDVISYTNGRGWEEVGWWENGHLRLRYHPWSRY
GSFLKPLDDSQHLRVVTLEERPFVIVEPADPGTSSCIRDSVPCRMPVNTSLVVDGTGPTK
HCCKGFCIDVLKRLAKIVGFTYDLYLVTNGRHGKNIDGEWNGMVGEVVSNRADMAIGSLT
INEERSEVVEFSVPFVETGISVFVGGGGVGGWGWVGGGFIXPSLFLEPYSPAVWVMMFVM
CLSVVAVTVFIFEFFSPVGYNRSLQSAKKSGGSKFTIGKSVWLLWALVFNNSVPVENPRG
TTSKIMVLVWAFFAVIFLASYTANLAAFMIQEEYIDTVSGLSDKKFQQPAEQYPPLRFGT
VPNGSTEENIRSNYPNMHQYMIRNNQKGVEEAIENLKTGKLDAFIYDAAVLNYMARKDEG
CKVMTIGSGKVFATTGYGIALHKNSRWKRPLDLALLQLVGDDEIDMLERLWLSGICHNDK
IEVMSSKLDIDNMAGVFYMLLVAMGLSLLVFAWEHLVYWKLRHCVKRSGGMDFLLALSRG
MYSCCQFEDETTPGGSKSSLPQYHTMTTMNTMPTGSQHLVTATVNNTAAIAMVQQQQQQK
HHQQQQQGPTYTTMLPGSPPTIGHSAMALGPSNSPLLEGPMPCSTFLPRHDRRLAVVDRW
NRPKPEQVMSGGSGGGLGVGGIAGGIHELQVPQYQPNLGQHWSLQVAGGAGGGGDTSLDE
YKRYYGPIDPEGLGATSDQQAGGPQQTPKANPRGPKASGMPRPPPKGPQQGPQQGPGHLI
SKPPPLIPCSPRRPPFWRRGSLTQARRKSSGGPLYENILPLGRRGGGRYGASDGGGRRGR
RPPPPPLPVPLSSPTHTPTTPSSPCRFYSSCSSASSSSSSSTSTSSSSSSSVSLSRSNSP
SSCSSDSSYNSSLSFRYRAGDRDFTVDDDYDSDLLTEESSLLLGSRKKIRSRRMSSRSLP
CSPPPPPIPPRKPRPQKDYGRERTGSQLAQLQEWWASWGERERARAGTTSRGDGTVSRQD
KRHHKERERERKRRKKGRKKKKREERERERERKRRKAKKRKKDDKVKKRERKRSVQEGGD
AEKREEFKSGTADYPSYPPLRRESFRKKSESSIRSYGWNISGEEERKEREEKERDDGEEI
RGKERESRRRNSKHYHSSSTKPSTSVKFWGGVNPSSVTIPSAFLPLLPVASKRRKSKSSD
RDAVGMEGERRPLLGRDGRGEIHSKEGLSIHEWGSGVEGEGEDSELERRKADRGKRRGGG
RTMSDEERDRDKVVGIYSDDDGSSGEFGKFERYWEDHEGRAVGGIGGGGWFFSTYPSREK
AGSINSRDDLFLERGERWGTAESGWGSGGGRVVGGGGGGGGERGWGSGSQWPPPPLTPPP
PRRYWSVDKLHMQDEKKSKRKSKEKGRGHAACSSCHSPRHHPHSHSSKWARVTSRSQEEL
YQQSQSFGGPPKPKQESSSSSKPERSQNPSKSGSQSNLSIQQRTQRTDRDRDRGRQSSPP
PSLIPNLPPPLPALPAPPSSSHPIHVPPPTSSSSVSSPSVVSSTPGAPQPSSMASASAKL
QYQRLRSVPQPQRFPQSPHLPLKAKSLCSRRGSAHFSSVESEV
NT seq
5712 nt
NT seq
+upstream
nt +downstream
nt
atggcctttttttccgcctccttttcaacatccctgtcgatggcggcgcttgtgggggag
acggttatgacgccgtcgggtcaggccaacgtcatttacctggctgtgaatgagagcagc
ccgggcagcctgctgctgcagctgtgtgagctgctggccaccacaccattacagggtttg
gtgttcgaggaggagcgaccgccgccgccaaaccgtgcccccctggcccccatgctggag
tttgtctccgcccagacgggagttcccgtggttgccgtagggggaggggccagcctggga
cgagagccacaggaaagcggctccatctacctccagttcacctgctccacctccctccag
ctcgaggtcatcttcgaggtgcttgaagagtacgactggacctccttctctgtggtgacc
acgcgtcaccacggctacgaggacttcctggctatggtggagggtatgacggacggctcg
ttcatcggctgggataagaagagcgtggtgattcttaacgtgactgatgaccctggcgga
gctcggacaaaacggctgctcaaagacaacgaagcccaggtccgtctgctctactgctcc
ctggaggaggcggagctggttttccgggcagctgtggcagccggtcaggccgggtccagt
cacatgtggtttgccgtgggaccagcgctgtccggtttgggcctggaggggctgcccaag
gccttgttcgccatccggcctcagggctggagggatgagccacgaaggcgcattgccaaa
ggcgtctcggtgctcacccacggggcgatggctctgcggagggacctggggaccaacagc
cgctcgcaatacgccggcaactgccagagtgacggcaaccagacccaccgagtgccagac
agaatcaggtacttcagcaacatatccctcggtgggcgggattattccttcaacagtgac
ggctacctgtccaacccgctgcttgatgtcatctcctacaccaatgggagaggctgggag
gaggttggctggtgggagaacggccacctgcgactacgttaccatccctggtctcgttac
ggctccttcctaaagcctctggatgactcccagcacctcagagtggttaccttggaggag
aggccctttgtcatcgtggagccggctgacccgggcaccagctcctgcatccgggactct
gtaccctgtcgcatgcccgtcaacaccagcttggtggtggatggcaccgggcccacgaag
cactgctgcaaagggttctgcatcgacgtcctcaagcgactggcaaagattgtgggtttc
acctatgacctgtacctggtgaccaatgggaggcacgggaagaacattgatggggagtgg
aacggcatggtcggagaggtggtgtccaacagggctgacatggccatcgggtctctcacc
attaacgaggagaggtcagaggtcgtggagttctccgttccgttcgtggagaccggcatc
agcgtctttgtggggggggggggggtggggggttggggctgggtggggggtggcttcatt
tgaccatcactatttttggagccctacagcccggcggtgtgggtgatgatgtttgtgatg
tgcctgtcggtggtggctgtcaccgtcttcatctttgagttcttcagccccgtgggatac
aaccgcagcctgcagagcgccaagaagtcaggtggatctaagttcaccatagggaagtcc
gtctggctgctgtgggcgctggtcttcaacaactctgtgcctgtggagaatcccagagga
accactagcaagatcatggtgctggtgtgggccttcttcgctgtcatcttcctggcctcc
tacactgccaacctggccgccttcatgatccaggaggagtacatcgacacggtgtcaggg
ctgtcagataagaagttccagcagccggcggagcagtacccgccgctgcgtttcggtaca
gtaccaaacggcagcacagaggagaacatccgctccaactatcccaacatgcaccagtac
atgatccgcaacaaccagaagggtgtggaggaggccattgagaacctcaagactggaaaa
ctggatgccttcatttatgacgctgcggtgctgaactatatggccagaaaggacgagggt
tgcaaggtgatgaccatcggctctggtaaagtgtttgccacgacgggctatggcatcgcc
ctgcacaagaactcccgctggaaacggcccctggacctggctctgctgcagctggttgga
gacgatgagattgatatgttggagcgtctctggctgtcgggtatctgccacaatgataag
atcgaggtgatgagcagtaagctggacatagacaacatggcaggggtcttctacatgctt
ctggtggccatgggcctcagcctcctggtatttgcctgggagcatctggtgtactggaaa
ctacggcactgtgtgaagcgatctggcgggatggacttcctcctggctctcagcaggggg
atgtacagttgctgccagtttgaggatgagacgacaccgggaggtagtaaaagctccctg
ccgcaataccacaccatgaccaccatgaacaccatgcctactggatcccaacacctcgtt
acagccacagtaaataacacggctgccattgcaatggtgcagcagcaacagcagcaaaag
caccaccaacaacagcaacaagggccaacctataccaccatgttacccggatcaccacca
actataggacactctgcaatggctctgggaccctccaacagccccttactggaaggaccc
atgccctgctccaccttcctgcctcgccatgaccgcagacttgctgttgttgatcgctgg
aacaggccaaagccagagcaagtcatgagtggaggcagtggtggaggattgggcgttggg
ggtatagcgggagggatccatgaacttcaggtcccacagtatcagccgaaccttggacag
cactggagcctgcaagtggcaggtggagcagggggaggcggtgacacaagtctagatgaa
tataagcgctactatggtcctatagatccagaggggctaggagctacctctgaccaacag
gcagggggcccccagcagactcccaaagctaatccgcgaggccccaaagcctcagggatg
ccacggccgcctcctaaaggcccccaacaaggcccccaacaaggcccagggcacctaatc
tccaagccacctccactgatcccgtgttcaccacgaaggcctcctttctggcgacgggga
agcctcactcaggcaaggagaaaaagctcaggaggtcccctgtatgagaatatactccct
ctggggagacgaggaggtgggaggtatggcgcaagcgatggaggcggaagaagagggcga
cgtcctccacctcctcctctgcctgttcccctttcctccccaacacacactccgaccacg
ccctcctccccatgccgtttctactcctcctgctccagtgcctcatcctcctcctcttcc
tctacatcgacctcatcctcttcttcgtcctccgtctcgctgtctcggtcaaattccccg
tcttcttgctccagtgacagctcctacaactcctcgttgagtttccggtatcgagcaggt
gaccgggactttacggttgatgacgattatgactccgatctgcttacagaggagtctagc
ctcctcttagggtcacggaagaagatccgttcacgtcgcatgtcatcgcgctcgctgccg
tgcagcccgccacctccaccaatcccgcccaggaagccccgccctcaaaaagattatggc
cgagagagaacaggcagccagctggcccagttacaggagtggtgggcgtcgtggggagag
agagagcgagcgagggcaggaacaacgagccggggagatggaaccgttagtagacaggat
aagagacaccacaaagagagggaacgcgagcggaagaggaggaagaagggccgaaagaag
aagaagagggaggagagggagagagaaagggagcgaaagcggcgcaaagcaaagaagagg
aagaaagacgataaggtgaagaagagagagcggaagaggtcagtgcaggagggaggagat
gctgaaaaaagggaggaattcaaatcagggaccgcagattacccttcatacccgcccctg
agacgagaatcttttcggaaaaagagcgagagctcaatccgaagctatggatggaacatc
tcaggtgaagaggagaggaaggaaagagaagagaaagagagggatgatggggaagagatc
agagggaaagaaagagaaagcagacgaaggaacagcaagcactatcatagctcgagcact
aagccttcgacgtctgtcaagttctggggaggggtcaacccgtcctccgtcaccattcca
tctgcctttctgcccttgttgcctgtcgcctctaaaaggaggaagagtaaaagttcagac
agggatgctgtaggaatggaaggagagaggaggccattgctcggacgcgacggaagaggt
gagattcactccaaggaagggttgtctatccacgagtgggggtccggagtagagggggag
ggagaagattcagagctggagaggaggaaagcagatcgtggaaaaaggcgtggaggagga
aggacaatgtccgatgaggagcgggaccgtgataaggtcgtcgggatatattcggatgac
gatggttcttcgggagagtttggaaagtttgagaggtactgggaggatcacgaaggcagg
gcggtgggagggattggtgggggcggttggtttttcagcacctacccctccagggagaaa
gccggcagcatcaacagtagagatgatctgttcctggagcgaggagagaggtgggggaca
gccgaaagtggatgggggtctggtggaggtcgtgttgttggtggtggtggtggtggtgga
ggagagagagggtggggatcgggatcgcaatggcccccgcctcctctcacaccaccacct
cctcgacgatactggtccgtcgacaaactccacatgcaggatgagaagaagagcaaacgc
aagtcaaaggaaaagggaagggggcacgctgcttgttcctcctgtcactccccccggcac
catccgcactcccattcctccaaatgggcccgcgtaacctcgcgaagccaggaagagctg
taccagcaaagccagagttttggcgggcccccgaagcccaaacaggaatcctcatcctcc
tccaaacctgagcgctcacagaatccctccaaatctggcagccagtccaacctcagtatc
cagcagcggacacagagaacagatagggatcgagatcgaggacgacaatcgtccccacct
ccgagcctcataccaaacttgccacccccgcttcctgcccttccagctcctccgtcctca
tctcaccctatccacgttcctccccctacctcttcctcctctgtttcctctccctctgtg
gtctcctccaccccaggggcaccccagccctcctccatggcttcggcaagtgccaaacta
cagtaccagaggctgcgctctgtaccccagccccagaggttccctcagtctcctcattta
cccctcaaagccaagagcctttgctcacgaaggggctcagcccatttctccagtgtggag
agcgaagtctga
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integrated database retrieval system
