Perca fluviatilis (European perch): 120572011
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Entry
120572011 CDS
T11622
Symbol
snrpd1
Name
(RefSeq) small nuclear ribonucleoprotein Sm D1
KO
K11087
small nuclear ribonucleoprotein D1
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
120572011 (snrpd1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pflt03041
]
120572011 (snrpd1)
03032 DNA replication proteins [BR:
pflt03032
]
120572011 (snrpd1)
Spliceosome [BR:
pflt03041
]
Complex A
U1 snRNP components
Sm proteins
120572011 (snrpd1)
U2 snRNP components
120572011 (snrpd1)
Complex B
U1 snRNP components
120572011 (snrpd1)
U4/U6.U5 tri-snRNP components
120572011 (snrpd1)
Complex C
U2 snRNP components
120572011 (snrpd1)
DNA replication proteins [BR:
pflt03032
]
Eukaryotic type
DNA Replication Termination Factors
Telomerase complex (fungi)
Sm core complex
120572011 (snrpd1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
EBNA2_Core
Gemin7
YomU_Tube
Hfq
SM-ATX
API5
AAA_RNF213_3
Motif
Other DBs
NCBI-GeneID:
120572011
NCBI-ProteinID:
XP_039677131
LinkDB
All DBs
Position
13:complement(17886458..17893429)
Genome browser
AA seq
119 aa
AA seq
DB search
MKLVRFLMKLSHETVTIELKNGTQVHGTITGVDVSMNTHLKAVKMTLKNREPTQLESLSI
RGNNIRYFILPDSLPLDTLLVDIEPKVKSKKREAVAGRGRGRGRGRGRGRGRGRGGPRR
NT seq
360 nt
NT seq
+upstream
nt +downstream
nt
atgaaacttgtcaggtttttgatgaaactcagccatgagacggttaccattgaactaaag
aatggcacccaggtccatggcaccattacaggtgttgatgtgagcatgaacacccacctg
aaagcggtgaaaatgaccctgaaaaacagggagcccactcagctggaatcactaagtatc
cgtggcaacaatattcgctactttatccttcctgacagcctcccactggacaccttgctg
gttgacatcgagccaaaggtcaagtccaagaagagagaagcagtggctggacggggacga
ggcaggggacgaggccgtggcagaggaaggggacgaggtcggggtggcccgaggagatga
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integrated database retrieval system
