Perca fluviatilis (European perch): 120573082
Help
Entry
120573082 CDS
T11622
Symbol
arhgef11
Name
(RefSeq) LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11
KO
K12331
Rho guanine nucleotide exchange factor 11
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04270
Vascular smooth muscle contraction
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09150 Organismal Systems
09153 Circulatory system
04270 Vascular smooth muscle contraction
120573082 (arhgef11)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pflt04131
]
120573082 (arhgef11)
Membrane trafficking [BR:
pflt04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
120573082 (arhgef11)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RGS-like
RhoGEF
PH_16
PDZ
PDZ_6
PDZ_2
RGS
Pept_S41_N_bact
Rep_fac-A_C
Motif
Other DBs
NCBI-GeneID:
120573082
NCBI-ProteinID:
XP_039678446
LinkDB
All DBs
Position
14:complement(19679255..19702223)
Genome browser
AA seq
1453 aa
AA seq
DB search
MSLRQPTSTLDSRAANKKNVHPFSPFAAWLSSLTIGDSERKSSATQQREPSIEIPAEITG
TGLVQRCVVVQKDQLGFGFTVCGERVKLVQNVRPGGAAVKAGVQEGDRIIKVNGSLVSSM
SHQEVVKLIKSGPYVALTLQGPPPSAASLPLEPLPTELTSNQRTSLGGEAPPPPPPPLPS
GLSSTPSQRITGPKPLQDPEVQKHATQILRKMLEQEEAELQELMEEQLRSPSLSLGERIE
SAKRRAHQVRVKIQQDLEGTRSECPTSYVIAGEGRLSMESSEGDMEAFESPHSSPSSSFR
IPQHRRQNSDTHTLSDSGGKAQIIGPEEEDEEDDGYAFNEMDGPFQDIELLRSRPAHMAV
FMRYVFTQLLDPNPLLFYLSVEAYLGSSTKDARALAPQICSHFLDPDAPLKIKVREEYLT
DIGKNXSSPEDIRGPLSELQQLVLPDIQDQIQDYRNKQMMGLGSLFGEGDLQQLDGDPMK
ERQVVDRQVTALWEILSKHEEDRSSPLASAVHLYLRHSGIKLRDSKVFPGLSTEKEKWLA
FLKTKKLSGTKKEKDGEDKKRNPILKYIGKPRTTSQSTFHVPLSPTEVRPGSVRNIIQQF
ENHTETGEEGDDAADPQRLSTSSLGEDGMDSPTISVRLARSESLKAQGEGRRRGVVSGTE
SVPRSRSDVDMEDCGEEREGPGLRLLQHSASSSASSSSARSLENPTPPYTPRSRRRSVDS
PLALLPDTAALEEEVFDSQIWQDTVPPQLLATLSPREVERQAVIYELFTTEASHLRTLRV
LDQVFFQKMRSVLNSDELACIFPNLPQVYELHASLCEAMKKRRETPIVQDIGDVMLARFE
DAAGDEFQEQASQLCSQQSQALELIKNKQRKDPRFAHIIQECEASPHCRRLQLKDLLVSE
MQRLTKYPLLLDNIIKHTEAVSSDLPSLQRAQACCRGILQAVNEVVGEIEHRQRLSQYQR
RLDAAPLFKSLDLTTKRMIHEGPLTWKVSKDKQIEIQALLLSDCLVLLQRGPDDRLQLRY
PSRWLGGGSGDSKTSFSPLVKLDSLLVRLVATDNKALYVISTTERQIYELVAGTSSEKNT
WKDLLEKTISSTGGSSPLINHGSMPISSPSLRSASPASTGSNVFADNSMTEQSDSMETHS
SEDIELSENTPRDQSGAFICGERKDGGVAEAALQDVETLRQLILRDLEEDGWSHDSDDTP
TNETANGRSSFTERQRPESLETVLNFSINEWEAEPEEVLPQDAEQPSSVQVVRKAVVAGP
SSSSSVRDDITDGVTLPSDQSSKPRGEATMQGNTFYLVMPTEQGESFTEDLNDPPTPTGS
HFPQPLEEVIPPQTHPEEETLTCGAEPNQSEAMQLEQEEETGQSQAGQSHVIKNVDEIFH
TIEGLTSKLRQLKEIEKSHHKLLKTLREPFVNQDSEDQQCHSATVSRTPSLDRSSGDGKE
GSPAEPKILSTGF
NT seq
4362 nt
NT seq
+upstream
nt +downstream
nt
atgagtctccgccaacccacctctacactggacagcagggcagccaataagaaaaacgtc
cacccgttcagcccttttgctgcttggctcagcagtctgaccatcggcgactcagagcgc
aaatcctctgccacccagcagagggagccatcgattgaaatccctgctgagattactggt
actggtcttgttcagagatgtgtggtcgtgcagaaggaccagctcggcttcggcttcaca
gtatgtggagagagagtcaagctagtgcagaatgtccgacctggtggtgcagcagtcaag
gccggggtccaagaaggggaccgaatcataaaggtgaatggctcactggtgtcctccatg
tcccatcaggaggtggtaaagctcatcaaatctggaccatatgtagctctgacactacaa
gggccacccccttcagccgcctccttgcccttagagcccctccccactgagctcacatcc
aatcaaagaacgtctctgggtggggaggccccaccccctccacctccgcccctgccctct
ggactgagcagcaccccttcccaaagaatcactggacccaaaccactacaggacccagaa
gtacaaaaacatgccactcagatactcaggaaaatgctggagcaggaagaggctgaactg
caggagttgatggaggagcagttgaggagcccgtcgctgtcactgggggagcggattgaa
agtgccaagagaagagctcaccaagtcagggtcaagattcagcaagatctggagggaacg
cgatccgaatgtcccacaagctacgtcatagcaggagaaggtcgactatcaatggagtca
agcgaaggagacatggaggcctttgagagtccccactcctccccttcatcctccttcagg
atcccccaacaccgacggcagaactccgacacacacaccctgtctgattcgggcggaaag
gcccagatcatcggccccgaggaagaggatgaagaagatgacggctatgcatttaacgag
atggacggaccgttccaggacattgagttgttgaggtcacgaccggcacacatggcggtg
ttcatgagatacgtcttcacccagcttctggaccccaaccctctgctgttttacctgtcg
gtggaggcctacctgggctccagtactaaagacgcccgcgcacttgcacctcagatctgt
tcccatttcctggacccagatgctcccctgaaaatcaaagtacgagaggagtatctcaca
gatataggtaagaactaatcatcaccggaggacatcagaggacctctgtccgagctgcag
cagctagtgctgccagacatccaagaccagatacaggactacaggaacaagcagatgatg
ggtcttggctctctgtttggtgaaggagacctgcagcagctggatggagacccgatgaaa
gagagacaggtggtggacagacaggtcactgccctctgggaaatactatcaaagcacgaa
gaggacagaagttctcctctggcttcggccgtgcacctatacctgcgtcattctggtatc
aagctgagagactccaaggtcttccctggtctgagcacggagaaggagaagtggctggct
ttcttaaagacgaaaaaactgagtggtaccaagaaagagaaagatggagaggataaaaag
agaaatcccatcctgaagtacattggcaaacccaggaccacatcccagtccacattccat
gtcccgttgtctcccaccgaagtccgtcctggcagtgtgaggaacatcattcagcagttt
gagaaccacacagagacgggagaggagggagacgatgctgctgacccccagaggctctcc
accagcagcctgggagaagacggcatggacagccctacgatctcagtgcgtctggcacgc
agcgagtcgttgaaggctcagggagaagggcggcggcggggcgttgtctcagggacggag
tctgtccctcgctctcgtagcgatgtggacatggaggactgcggggaggagagggaggga
ccaggcctcaggctgctgcagcacagcgcctcgtcctctgcgtccagcagctctgcacgg
tctctagagaaccctacacccccatacacccctcggtctagacgcaggagtgtggattca
ccgttggccctgctgccagacactgcagcactggaggaggaggtgtttgacagtcagatc
tggcaggacacagttcctcctcagctcctcgccacactcagtccaagggaggtggaaaga
caggccgtcatatacgagctgttcaccaccgaggcgtcccacctgcggaccttgagggtc
ctggaccaggtctttttccagaagatgaggtctgtgctgaactctgatgagctggcctgc
atcttccccaacctgccccaggtctatgaactccacgcaagtctgtgcgaggcgatgaag
aagcgaagagaaactcccatcgttcaggacatcggggacgttatgctggccaggtttgaa
gatgcagctggagatgagtttcaggaacaagcatcgcagctgtgcagccagcagtctcag
gctctggagctcatcaagaacaaacaacgtaaagaccctcgcttcgctcacatcatccag
gagtgtgaagcgagtcctcactgtcggaggctgcagctcaaagacctgctggtgtcagag
atgcagagactcaccaagtaccccctgctgctggacaacatcattaaacacacagaggct
gtttcgtcggacctcccctcacttcaacgcgcccaggcttgttgccgagggatactccag
gctgttaatgaggttgtcggggaaatagaacaccggcaacgcctcagtcaataccaacgc
aggctggacgctgcccctctattcaagagtctggacctcaccactaagagaatgattcat
gaaggtcctctcacgtggaaagtcagcaaagataagcagatagagattcaagcgctgctg
ctgtcagactgcctggtcctcctacagaggggcccagacgaccggctgcagctgagatat
ccatcccgctggctgggtggaggcagcggagacagcaagacctccttcagccctctggtg
aagctggactctctgctggtccgcttagtagctacagacaacaaagccctctatgtcatc
agcaccacagagaggcagatctatgagctggtggctgggacatcatcagagaaaaacacc
tggaaagatttacttgaaaagaccatctcgtcaactggtggttcatcgcccctgatcaat
cacggatccatgcctatatcctcccccagtctacgcagtgcgtccccagcgtcaactggc
agcaatgtctttgcagacaactccatgacggagcagtcggattcaatggagactcattcc
tccgaggacattgagctctcagaaaacacacctagggaccaatcaggagctttcatctgt
ggtgagagaaaagacggtggtgtggcagaggccgctttacaagatgttgaaacactaagg
cagctgatattacgagatttggaagaggacggttggagccacgattcagatgacacgccc
accaacgagacggccaacggaaggagctcattcaccgaaagacagcggccagagtctctc
gagactgtcctcaacttcagcatcaacgaatgggaggccgagcctgaggaggttctgcct
caagacgcagagcaacccagcagcgttcaggtcgtacggaaagctgtggttgcgggtcct
tcttcttcttcttctgtccgtgatgacatcactgatggtgtcaccctcccctccgaccaa
tcatccaagccgagaggcgaggccactatgcaggggaacactttctacttggtaatgccg
acggagcagggagagagcttcactgaagacctcaacgaccctcctacccccacaggcagc
cacttccctcagcctctggaggaagtgataccaccacagactcatccagaggaggaaacg
ctcacctgcggtgcagagcccaaccaatcagaggctatgcaactggaacaggaagaggaa
acgggccaatcgcaggctgggcagagccacgtgatcaaaaatgtggatgagattttccac
acgattgaggggttgacgagcaagttgcgccagctgaaggaaatcgagaagtcccatcac
aagcttttgaaaaccctcagagagcccttcgtcaatcaggactccgaggaccaacagtgt
cactcagcaaccgtctccagaacaccatctctggatcgtagctcaggagacggcaaagag
ggcagtccagcagagcccaagattctgtcgactggattctga
DBGET
integrated database retrieval system
