Perca fluviatilis (European perch): 120573882
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Entry
120573882 CDS
T11622
Symbol
ush1ga
Name
(RefSeq) Usher syndrome type-1G protein homolog
KO
K21878
Usher syndrome type-1G protein
Organism
pflt Perca fluviatilis (European perch)
Pathway
pflt04519
Cadherin signaling
Brite
KEGG Orthology (KO) [BR:
pflt00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04519 Cadherin signaling
120573882 (ush1ga)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
pflt03037
]
120573882 (ush1ga)
Cilium and associated proteins [BR:
pflt03037
]
Primary cilia and associated proteins
USH complex and associated proteins
120573882 (ush1ga)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ank_2
Ank_4
Ank
Ank_5
Ank_3
SAM_1
SAM_7
RGCC
Motif
Other DBs
NCBI-GeneID:
120573882
NCBI-ProteinID:
XP_039679708
LinkDB
All DBs
Position
15:complement(14882288..14889482)
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AA seq
469 aa
AA seq
DB search
MNDRYHKAARDGYLDLLKEATRKDLNAPDEDGMTPTLWAAYHGNLEALQLIAARGGNPDK
CDIWGNTPLHLAAANGHLNCLFFLVSFGANIWCLDNDYHTPLDMAATKNHMDCVRYLDTI
ATKQTGLNTKLVSKMKDRAFRDAERRIKECVKMQKKHHKRMERRFHRETSEASASDVMSF
SSYTSSSLSHKLHNFNAATVSVPYSQATLHATNRGKTKIQRKLEKRKQGDGTFKIYEDGR
KSVRSLSGLQLGNDVMFVKQGTYVNPKDRGRRNIRDMFPRDNYDAISRAMSEPDLHGTDV
DYSEISTDSGHDSLFNRPGLGTMVFRRNYVSGGMFDLGGRDEDSADNNVRLRSRLQQYPS
ADEDSIGSARSLQERNVEELPWEEIELGLDDDDEANTSPLEVFLATQSMSDFFSIFKREK
IDLEALLLCSDHDLKSIHIPLGPRKKLLDACKRRLETIEYPDCIEDTEL
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgaatgacaggtaccacaaggcggcccgggacggctacctggacctgctgaaggaggca
actcggaaggatctcaacgcgccggatgaggatggcatgacaccgacgttatgggctgct
tatcacggcaacctggaggctctgcagctgatcgcggcgaggggaggaaaccctgacaag
tgtgatatatgggggaacacgccactccacctggcagctgccaatggtcacctcaattgc
cttttcttcctggtgtctttcggtgccaacatatggtgcctggacaacgactaccacacg
ccgttggacatggccgccacaaagaatcacatggattgtgtccgctacttggacaccatc
gccaccaagcagacaggcctcaacaccaagctggtcagcaagatgaaggaccgggcgttt
cgcgatgctgagcggcgaatcaaagagtgtgtgaagatgcagaagaaacaccacaaacgc
atggagcgaaggtttcatagggagacttctgaggcttctgcatcagatgtgatgagcttt
tccagttacaccagcagctctcttagccacaagctgcacaactttaatgcagccacagtc
agtgtgccatattctcaggctactctccatgccacaaaccgagggaagacaaagattcag
aggaagctggagaagaggaaacaaggagatgggacctttaaaatctacgaggatgggagg
aagagtgtgcgctccctctctggacttcagttgggcaacgatgttatgtttgtcaaacag
gggacctacgtcaacccaaaggaccgtggccgccgcaacattcgtgacatgttcccaaga
gacaattatgatgccatttcacgtgccatgagcgagccggacctccacgggaccgatgtg
gactactctgagatcagcactgactcaggacatgattctctgttcaatagacccggtctg
ggcaccatggtttttaggaggaactatgtgagtggggggatgttcgacctcggtggtcgg
gatgaggacagtgcagacaataatgtgcgtttacgcagtcggctgcagcaatacccgagt
gcagatgaagacagcattggcagtgcacgcagcctgcaggagaggaacgtggaggagctg
ccctgggaagaaatcgaattagggctggacgatgatgatgaggctaacacaagcccgctg
gaggtcttcctcgccacacagagcatgagtgactttttctccattttcaagagggaaaag
attgaccttgaagcactgttgctctgctctgaccatgaccttaagagtatccacatcccc
ttaggaccaagaaaaaagctcttagatgcttgtaagagacggctggagaccatcgagtac
ccagactgcattgaggacacagaactgtga
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